RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 NDUFB4O95168 129 aa6.72□□□□□ -1.33
AC011228.1-201ENST00000439027 CD5P06127 495 aa6.72□□□□□ -1.33
AC011228.1-201ENST00000439027 BCL2P10415 239 aa6.72□□□□□ -1.33
AC011228.1-201ENST00000439027 DEFB131AP59861 70 aa6.72□□□□□ -1.33
AC011228.1-201ENST00000439027 LCE3BQ5TA77 95 aa6.72□□□□□ -1.33
AC011228.1-201ENST00000439027 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.72□□□□□ -1.33
AC011228.1-201ENST00000439027 COMMD7Q86VX2 200 aa6.72□□□□□ -1.33
AC011228.1-201ENST00000439027 RXFP4Q8TDU9 374 aa6.72□□□□□ -1.33
AC011228.1-201ENST00000439027 NRN1Q9NPD7 142 aa6.72□□□□□ -1.33
AC011228.1-201ENST00000439027 MED9Q9NWA0 146 aa6.72□□□□□ -1.33
AC011228.1-201ENST00000439027 AGRNO00468 2067 aa6.72□□□□□ -1.33
AC011228.1-201ENST00000439027 LOC102723971A0A1B0GUV8 181 aa6.71□□□□□ -1.34
AC011228.1-201ENST00000439027 A0A1W2PRE2 83 aa6.71□□□□□ -1.34
AC011228.1-201ENST00000439027 RAB19A4D1S5 217 aa6.71□□□□□ -1.34
AC011228.1-201ENST00000439027 PGPA6NDG6 321 aa6.71□□□□□ -1.34
AC011228.1-201ENST00000439027 C11orf94C9JXX5 98 aa6.71□□□□□ -1.34
AC011228.1-201ENST00000439027 ATP5G3P48201 142 aa6.71□□□□□ -1.34
AC011228.1-201ENST00000439027 MEOX2P50222 304 aa6.71□□□□□ -1.34
AC011228.1-201ENST00000439027 SUMO1P63165 101 aaKnown RBP6.71□□□□□ -1.34
AC011228.1-201ENST00000439027 SRSF3P84103 164 aaKnown RBP6.71□□□□□ -1.34
AC011228.1-201ENST00000439027 PDE6HQ13956 83 aa6.71□□□□□ -1.34
AC011228.1-201ENST00000439027 ICAM4Q14773 271 aa6.71□□□□□ -1.34
AC011228.1-201ENST00000439027 ZNF506Q5JVG8 444 aa6.71□□□□□ -1.34
AC011228.1-201ENST00000439027 IGFL4Q6B9Z1 124 aa6.71□□□□□ -1.34
AC011228.1-201ENST00000439027 STHQ8IWL8 128 aa6.71□□□□□ -1.34
AC011228.1-201ENST00000439027 SLC7A5P1Q8MH63 180 aa6.71□□□□□ -1.34
AC011228.1-201ENST00000439027 EXOC3-AS1Q8N2X6 119 aa6.71□□□□□ -1.34
AC011228.1-201ENST00000439027 C16orf92Q96LL3 132 aa6.71□□□□□ -1.34
AC011228.1-201ENST00000439027 Q9H3A6 140 aa6.71□□□□□ -1.34
AC011228.1-201ENST00000439027 ZNF331Q9NQX6 463 aaPredicted RBP6.71□□□□□ -1.34
AC011228.1-201ENST00000439027 OTORQ9NRC9 128 aa6.71□□□□□ -1.34
AC011228.1-201ENST00000439027 VAX2Q9UIW0 290 aa6.71□□□□□ -1.34
AC011228.1-201ENST00000439027 ARL2-SNX15V9GYD0 113 aa6.71□□□□□ -1.34
AC011228.1-201ENST00000439027 VPS13DQ5THJ4 4388 aa6.7□□□□□ -1.34
AC011228.1-201ENST00000439027 DNAH6Q9C0G6 4158 aa6.7□□□□□ -1.34
AC011228.1-201ENST00000439027 GGTLC3B5MD39 225 aa6.7□□□□□ -1.34
AC011228.1-201ENST00000439027 ZNF253O75346 499 aa6.7□□□□□ -1.34
AC011228.1-201ENST00000439027 SLC25A5P05141 298 aaKnown RBP6.7□□□□□ -1.34
AC011228.1-201ENST00000439027 HLA-DMBP28068 263 aa6.7□□□□□ -1.34
AC011228.1-201ENST00000439027 TAGLN2P37802 199 aaKnown RBP6.7□□□□□ -1.34
AC011228.1-201ENST00000439027 PSG9Q00887 426 aa6.7□□□□□ -1.34
AC011228.1-201ENST00000439027 MEF2BQ02080 365 aaPredicted RBP6.7□□□□□ -1.34
AC011228.1-201ENST00000439027 PEA15Q15121 130 aa6.7□□□□□ -1.34
AC011228.1-201ENST00000439027 LGALS9CQ6DKI2 356 aa6.7□□□□□ -1.34
AC011228.1-201ENST00000439027 LYPD1Q8N2G4 141 aa6.7□□□□□ -1.34
AC011228.1-201ENST00000439027 FAM24BQ8N5W8 94 aa6.7□□□□□ -1.34
AC011228.1-201ENST00000439027 RNF182Q8N6D2 247 aa6.7□□□□□ -1.34
AC011228.1-201ENST00000439027 NKX6-2Q9C056 277 aaPredicted RBP6.7□□□□□ -1.34
AC011228.1-201ENST00000439027 C11orf68Q9H3H3 251 aaKnown RBP6.7□□□□□ -1.34
AC011228.1-201ENST00000439027 AAMDCQ9H7C9 122 aa6.7□□□□□ -1.34
AC011228.1-201ENST00000439027 TREM1Q9NP99 234 aa6.7□□□□□ -1.34
AC011228.1-201ENST00000439027 TRAV2A0A0B4J234 112 aa6.69□□□□□ -1.34
AC011228.1-201ENST00000439027 TRAV8-2A0A0B4J237 113 aa6.69□□□□□ -1.34
AC011228.1-201ENST00000439027 KNCNA6PVL3 124 aa6.69□□□□□ -1.34
AC011228.1-201ENST00000439027 C9JQL5 133 aa6.69□□□□□ -1.34
AC011228.1-201ENST00000439027 PRB4P10163 310 aaPredicted RBP6.69□□□□□ -1.34
AC011228.1-201ENST00000439027 ID1P41134 155 aa6.69□□□□□ -1.34
AC011228.1-201ENST00000439027 NDUFA5Q16718 116 aa6.69□□□□□ -1.34
AC011228.1-201ENST00000439027 C2CD4CQ8TF44 421 aa6.69□□□□□ -1.34
AC011228.1-201ENST00000439027 DCANP1Q8TF63 244 aa6.69□□□□□ -1.34
AC011228.1-201ENST00000439027 TXNDC17Q9BRA2 123 aa6.69□□□□□ -1.34
AC011228.1-201ENST00000439027 SLC50A1Q9BRV3 221 aa6.69□□□□□ -1.34
AC011228.1-201ENST00000439027 RPH3ALQ9UNE2 315 aa6.69□□□□□ -1.34
AC011228.1-201ENST00000439027 HECTD4Q9Y4D8 3996 aa6.68□□□□□ -1.34
AC011228.1-201ENST00000439027 ZNF705FA8MVS1 300 aaPredicted RBP6.68□□□□□ -1.34
AC011228.1-201ENST00000439027 IGLL5B9A064 214 aa6.68□□□□□ -1.34
AC011228.1-201ENST00000439027 K7EQG2 157 aa6.68□□□□□ -1.34
AC011228.1-201ENST00000439027 M0R3E3 92 aa6.68□□□□□ -1.34
AC011228.1-201ENST00000439027 ISLRO14498 428 aa6.68□□□□□ -1.34
AC011228.1-201ENST00000439027 SOCS3O14543 225 aa6.68□□□□□ -1.34
AC011228.1-201ENST00000439027 PDE6DO43924 150 aa6.68□□□□□ -1.34
AC011228.1-201ENST00000439027 ZNF688P0C7X2 276 aa6.68□□□□□ -1.34
AC011228.1-201ENST00000439027 CSN1S1P47710 185 aa6.68□□□□□ -1.34
AC011228.1-201ENST00000439027 CEBPGP53567 150 aa6.68□□□□□ -1.34
AC011228.1-201ENST00000439027 GNG5P63218 68 aa6.68□□□□□ -1.34
AC011228.1-201ENST00000439027 PSG3Q16557 428 aa6.68□□□□□ -1.34
AC011228.1-201ENST00000439027 CCDC28AQ8IWP9 274 aa6.68□□□□□ -1.34
AC011228.1-201ENST00000439027 EIF4E3Q8N5X7 224 aaKnown RBP6.68□□□□□ -1.34
AC011228.1-201ENST00000439027 C5orf17Q8NAS9 161 aa6.68□□□□□ -1.34
AC011228.1-201ENST00000439027 CMTM2Q8TAZ6 248 aa6.68□□□□□ -1.34
AC011228.1-201ENST00000439027 C20orf173Q96LM9 149 aa6.68□□□□□ -1.34
AC011228.1-201ENST00000439027 LINC00052Q96N35 136 aa6.68□□□□□ -1.34
AC011228.1-201ENST00000439027 EPDR1Q9UM22 224 aa6.68□□□□□ -1.34
AC011228.1-201ENST00000439027 IGHV4-28A0A0C4DH34 117 aa6.67□□□□□ -1.34
AC011228.1-201ENST00000439027 F6UZH7 168 aa6.67□□□□□ -1.34
AC011228.1-201ENST00000439027 SRP19P09132 144 aaKnown RBP6.67□□□□□ -1.34
AC011228.1-201ENST00000439027 SNRPD3P62318 126 aaKnown RBP6.67□□□□□ -1.34
AC011228.1-201ENST00000439027 ACTL10Q5JWF8 245 aa6.67□□□□□ -1.34
AC011228.1-201ENST00000439027 SAMD13Q5VXD3 122 aa6.67□□□□□ -1.34
AC011228.1-201ENST00000439027 UQCC3Q6UW78 93 aa6.67□□□□□ -1.34
AC011228.1-201ENST00000439027 ZNF738Q8NE65 137 aa6.67□□□□□ -1.34
AC011228.1-201ENST00000439027 RPUSD4Q96CM3 377 aaKnown RBP6.67□□□□□ -1.34
AC011228.1-201ENST00000439027 SLC35B3Q9H1N7 401 aa6.67□□□□□ -1.34
AC011228.1-201ENST00000439027 SMDT1Q9H4I9 107 aa6.67□□□□□ -1.34
AC011228.1-201ENST00000439027 CLEC5AQ9NY25 188 aa6.67□□□□□ -1.34
AC011228.1-201ENST00000439027 PRELID1Q9Y255 219 aa6.67□□□□□ -1.34
AC011228.1-201ENST00000439027 PRAC2D3DTV9 90 aa6.66□□□□□ -1.34
AC011228.1-201ENST00000439027 TMEM250H0YL14 139 aa6.66□□□□□ -1.34
AC011228.1-201ENST00000439027 PEX7O00628 323 aa6.66□□□□□ -1.34
AC011228.1-201ENST00000439027 TCRAP04437 139 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms