RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 OR2G3Q8NGZ4 309 aa17.6■□□□□ 0.41
RAPGEF1-206ENST00000438647 PSMG3Q9BT73 122 aaPredicted RBP17.6■□□□□ 0.41
RAPGEF1-206ENST00000438647 AGPAT4-IT1Q9H0P7 198 aa17.6■□□□□ 0.41
RAPGEF1-206ENST00000438647 OR10G4Q8NGN3 311 aa17.59■□□□□ 0.41
RAPGEF1-206ENST00000438647 OR10G9Q8NGN4 311 aa17.59■□□□□ 0.41
RAPGEF1-206ENST00000438647 OR10G7Q8NGN6 311 aa17.59■□□□□ 0.41
RAPGEF1-206ENST00000438647 PLA2G2EQ9NZK7 142 aa17.59■□□□□ 0.41
RAPGEF1-206ENST00000438647 VPS13DQ5THJ4 4388 aa17.59■□□□□ 0.41
RAPGEF1-206ENST00000438647 IGKV2-40A0A087WW87 121 aaPredicted RBP17.58■□□□□ 0.4
RAPGEF1-206ENST00000438647 TRAV12-3A0A0B4J271 114 aa17.58■□□□□ 0.4
RAPGEF1-206ENST00000438647 PLAC8L1A1L4L8 177 aa17.58■□□□□ 0.4
RAPGEF1-206ENST00000438647 IGKV2D-40P01614 121 aaPredicted RBP17.58■□□□□ 0.4
RAPGEF1-206ENST00000438647 RAB2AP61019 212 aa17.58■□□□□ 0.4
RAPGEF1-206ENST00000438647 RNASE8Q8TDE3 154 aaKnown RBP17.58■□□□□ 0.4
RAPGEF1-206ENST00000438647 PYGO2Q9BRQ0 406 aa17.58■□□□□ 0.4
RAPGEF1-206ENST00000438647 Q9H3A6 140 aa17.58■□□□□ 0.4
RAPGEF1-206ENST00000438647 TNFSF18Q9UNG2 199 aa17.58■□□□□ 0.4
RAPGEF1-206ENST00000438647 TIMM8BQ9Y5J9 83 aaPredicted RBP17.58■□□□□ 0.4
RAPGEF1-206ENST00000438647 MBP02144 154 aa17.57■□□□□ 0.4
RAPGEF1-206ENST00000438647 NMBP08949 121 aa17.57■□□□□ 0.4
RAPGEF1-206ENST00000438647 HTN3P15516 51 aa17.57■□□□□ 0.4
RAPGEF1-206ENST00000438647 ATP6V0CP27449 155 aa17.57■□□□□ 0.4
RAPGEF1-206ENST00000438647 SERF2P84101 59 aa17.57■□□□□ 0.4
RAPGEF1-206ENST00000438647 FAM19A4Q96LR4 140 aa17.57■□□□□ 0.4
RAPGEF1-206ENST00000438647 C7orf71A4D174 169 aa17.56■□□□□ 0.4
RAPGEF1-206ENST00000438647 RNF222A6NCQ9 220 aa17.56■□□□□ 0.4
RAPGEF1-206ENST00000438647 KLLNB2CW77 178 aa17.56■□□□□ 0.4
RAPGEF1-206ENST00000438647 RXFP4Q8TDU9 374 aa17.56■□□□□ 0.4
RAPGEF1-206ENST00000438647 BORCS7-ASMTA0A0B4J1R7 106 aa17.55■□□□□ 0.4
RAPGEF1-206ENST00000438647 RBAKDNA6NC62 111 aa17.55■□□□□ 0.4
RAPGEF1-206ENST00000438647 DEFB130BP0DP73 79 aa17.55■□□□□ 0.4
RAPGEF1-206ENST00000438647 DEFB130AP0DP74 79 aa17.55■□□□□ 0.4
RAPGEF1-206ENST00000438647 CRISP2P16562 243 aa17.55■□□□□ 0.4
RAPGEF1-206ENST00000438647 CDC34P49427 236 aaPredicted RBP17.55■□□□□ 0.4
RAPGEF1-206ENST00000438647 FAM74A1Q5RGS3 127 aa17.55■□□□□ 0.4
RAPGEF1-206ENST00000438647 VGLL1Q99990 258 aa17.55■□□□□ 0.4
RAPGEF1-206ENST00000438647 TRBV7-9A0A0J9YWB2 115 aa17.54■□□□□ 0.4
RAPGEF1-206ENST00000438647 GPX1P07203 203 aa17.54■□□□□ 0.4
RAPGEF1-206ENST00000438647 ZNF138P52744 262 aa17.54■□□□□ 0.4
RAPGEF1-206ENST00000438647 GNPNAT1Q96EK6 184 aaPredicted RBP17.54■□□□□ 0.4
RAPGEF1-206ENST00000438647 OTORQ9NRC9 128 aa17.54■□□□□ 0.4
RAPGEF1-206ENST00000438647 ZNF492Q9P255 531 aa17.54■□□□□ 0.4
RAPGEF1-206ENST00000438647 EIF3GO75821 320 aaKnown RBP eCLIP17.53■□□□□ 0.4
RAPGEF1-206ENST00000438647 CMTM2Q8TAZ6 248 aa17.53■□□□□ 0.4
RAPGEF1-206ENST00000438647 SNURFLB1AK76 121 aa17.52■□□□□ 0.4
RAPGEF1-206ENST00000438647 P0DMU3 169 aa17.52■□□□□ 0.4
RAPGEF1-206ENST00000438647 FAM231AP0DMU4 169 aa17.52■□□□□ 0.4
RAPGEF1-206ENST00000438647 FAM231CP0DMU5 169 aa17.52■□□□□ 0.4
RAPGEF1-206ENST00000438647 NOP10Q9NPE3 64 aaKnown RBP17.52■□□□□ 0.4
RAPGEF1-206ENST00000438647 HMGB3O15347 200 aaKnown RBP17.51■□□□□ 0.39
RAPGEF1-206ENST00000438647 STAG3L2P0CL84 134 aa17.51■□□□□ 0.39
RAPGEF1-206ENST00000438647 STAG3L3P0CL85 134 aa17.51■□□□□ 0.39
RAPGEF1-206ENST00000438647 RNASE4P34096 147 aaKnown RBP17.51■□□□□ 0.39
RAPGEF1-206ENST00000438647 BTN1A1Q13410 526 aa17.51■□□□□ 0.39
RAPGEF1-206ENST00000438647 RPL7L1Q6DKI1 246 aaKnown RBP17.51■□□□□ 0.39
RAPGEF1-206ENST00000438647 HYLS1Q96M11 299 aa17.51■□□□□ 0.39
RAPGEF1-206ENST00000438647 PGPA6NDG6 321 aa17.5■□□□□ 0.39
RAPGEF1-206ENST00000438647 CBY3A6NI87 242 aa17.5■□□□□ 0.39
RAPGEF1-206ENST00000438647 DIRC3C9JPN6 131 aa17.5■□□□□ 0.39
RAPGEF1-206ENST00000438647 G3V3Q6 166 aa17.5■□□□□ 0.39
RAPGEF1-206ENST00000438647 ZNF324O75467 553 aaPredicted RBP17.5■□□□□ 0.39
RAPGEF1-206ENST00000438647 ATP5G1P05496 136 aa17.5■□□□□ 0.39
RAPGEF1-206ENST00000438647 ARL14EPLP0DKL9 152 aa17.5■□□□□ 0.39
RAPGEF1-206ENST00000438647 ATP5G3P48201 142 aa17.5■□□□□ 0.39
RAPGEF1-206ENST00000438647 CD300CQ08708 224 aa17.5■□□□□ 0.39
RAPGEF1-206ENST00000438647 ZFAND2AQ8N6M9 145 aa17.5■□□□□ 0.39
RAPGEF1-206ENST00000438647 ARL6IP6Q8N6S5 226 aa17.5■□□□□ 0.39
RAPGEF1-206ENST00000438647 ZNF680Q8NEM1 530 aa17.5■□□□□ 0.39
RAPGEF1-206ENST00000438647 RAB24Q969Q5 203 aa17.5■□□□□ 0.39
RAPGEF1-206ENST00000438647 LINC00467Q9BRT7 94 aa17.5■□□□□ 0.39
RAPGEF1-206ENST00000438647 SH3BGRL3Q9H299 93 aa17.5■□□□□ 0.39
RAPGEF1-206ENST00000438647 DNAH6Q9C0G6 4158 aa17.5■□□□□ 0.39
RAPGEF1-206ENST00000438647 TAAR5O14804 337 aa17.49■□□□□ 0.39
RAPGEF1-206ENST00000438647 ACTR3CQ9C0K3 210 aaPredicted RBP17.49■□□□□ 0.39
RAPGEF1-206ENST00000438647 LENEPQ9Y5L5 61 aa17.49■□□□□ 0.39
RAPGEF1-206ENST00000438647 ARPC5O15511 151 aa17.48■□□□□ 0.39
RAPGEF1-206ENST00000438647 TMEM88Q6PEY1 159 aa17.48■□□□□ 0.39
RAPGEF1-206ENST00000438647 EIF4E3Q8N5X7 224 aaKnown RBP17.48■□□□□ 0.39
RAPGEF1-206ENST00000438647 Q8TAT8 98 aa17.48■□□□□ 0.39
RAPGEF1-206ENST00000438647 TMED6Q8WW62 240 aa17.48■□□□□ 0.39
RAPGEF1-206ENST00000438647 ANXA2RQ3ZCQ2 193 aa17.47■□□□□ 0.39
RAPGEF1-206ENST00000438647 C15orf53Q8NAA6 179 aa17.47■□□□□ 0.39
RAPGEF1-206ENST00000438647 F5H768 121 aa17.46■□□□□ 0.39
RAPGEF1-206ENST00000438647 DAZ2Q13117 558 aaKnown RBP17.46■□□□□ 0.39
RAPGEF1-206ENST00000438647 TMEM167BQ9NRX6 74 aa17.46■□□□□ 0.39
RAPGEF1-206ENST00000438647 RPH3ALQ9UNE2 315 aa17.46■□□□□ 0.39
RAPGEF1-206ENST00000438647 RGS13O14921 159 aa17.45■□□□□ 0.38
RAPGEF1-206ENST00000438647 CXorf1O96002 111 aa17.45■□□□□ 0.38
RAPGEF1-206ENST00000438647 GCHFRP30047 84 aa17.45■□□□□ 0.38
RAPGEF1-206ENST00000438647 PRR9Q5T870 116 aa17.45■□□□□ 0.38
RAPGEF1-206ENST00000438647 LINC00612Q8N6U2 182 aa17.45■□□□□ 0.38
RAPGEF1-206ENST00000438647 POM121L12Q8N7R1 296 aa17.45■□□□□ 0.38
RAPGEF1-206ENST00000438647 SUN5Q8TC36 379 aa17.44■□□□□ 0.38
RAPGEF1-206ENST00000438647 ST6GAL2Q96JF0 529 aa17.44■□□□□ 0.38
RAPGEF1-206ENST00000438647 IGHV1OR15-1A0A075B7D0 117 aa17.43■□□□□ 0.38
RAPGEF1-206ENST00000438647 GOLT1AQ6ZVE7 132 aa17.43■□□□□ 0.38
RAPGEF1-206ENST00000438647 SERTM2A0A1B0GWG4 89 aa17.42■□□□□ 0.38
RAPGEF1-206ENST00000438647 GAGE12BA1L429 117 aa17.42■□□□□ 0.38
RAPGEF1-206ENST00000438647 SMLR1H3BR10 107 aa17.42■□□□□ 0.38
RAPGEF1-206ENST00000438647 GAGE7O76087 117 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms