RNA–Protein interactions for RNA: ENST00000438581.6

TMEM39A-202, Transcript of transmembrane protein 39A, humanhuman

TSL 1 (best)

Gene TMEM39A, Length 4,393 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-202ENST00000438581 Q71RC1 249 aaPredicted RBP6.5□□□□□ -1.37
TMEM39A-202ENST00000438581 C8orf46Q8TAG6 207 aa6.5□□□□□ -1.37
TMEM39A-202ENST00000438581 ATP6V0E1O15342 81 aa6.5□□□□□ -1.37
TMEM39A-202ENST00000438581 ELOBQ15370 118 aa6.5□□□□□ -1.37
TMEM39A-202ENST00000438581 EPDR1Q9UM22 224 aa6.5□□□□□ -1.37
TMEM39A-202ENST00000438581 ATP5G1P05496 136 aa6.49□□□□□ -1.37
TMEM39A-202ENST00000438581 CKS2P33552 79 aa6.49□□□□□ -1.37
TMEM39A-202ENST00000438581 LINC00311Q8N616 119 aa6.49□□□□□ -1.37
TMEM39A-202ENST00000438581 NDUFA4L2Q9NRX3 87 aa6.49□□□□□ -1.37
TMEM39A-202ENST00000438581 NDUFB8O95169 186 aa6.49□□□□□ -1.37
TMEM39A-202ENST00000438581 IGHV4-39P01824 125 aa6.49□□□□□ -1.37
TMEM39A-202ENST00000438581 SRIP30626 198 aa6.49□□□□□ -1.37
TMEM39A-202ENST00000438581 RPL13AP40429 203 aaKnown RBP6.49□□□□□ -1.37
TMEM39A-202ENST00000438581 IGFL4Q6B9Z1 124 aa6.49□□□□□ -1.37
TMEM39A-202ENST00000438581 STPG4Q8N801 248 aa6.49□□□□□ -1.37
TMEM39A-202ENST00000438581 SLC25A39Q9BZJ4 359 aaPredicted RBP6.49□□□□□ -1.37
TMEM39A-202ENST00000438581 ATG2AQ2TAZ0 1938 aa6.49□□□□□ -1.37
TMEM39A-202ENST00000438581 H3BRM9 83 aa6.49□□□□□ -1.37
TMEM39A-202ENST00000438581 HLA-DQA1P01909 254 aa6.49□□□□□ -1.37
TMEM39A-202ENST00000438581 TSPOP30536 169 aa6.49□□□□□ -1.37
TMEM39A-202ENST00000438581 CR1LQ2VPA4 569 aa6.49□□□□□ -1.37
TMEM39A-202ENST00000438581 IGHV4-30-2A0A087WSY4 118 aa6.48□□□□□ -1.37
TMEM39A-202ENST00000438581 TINCRA0A1B0GVN0 87 aa6.48□□□□□ -1.37
TMEM39A-202ENST00000438581 C9JCJ5 164 aa6.48□□□□□ -1.37
TMEM39A-202ENST00000438581 CA1P00915 261 aaPredicted RBP6.48□□□□□ -1.37
TMEM39A-202ENST00000438581 MT-ND6P03923 174 aa6.48□□□□□ -1.37
TMEM39A-202ENST00000438581 FAM74A4Q5TZK3 123 aa6.48□□□□□ -1.37
TMEM39A-202ENST00000438581 CDPF1Q6NVV7 123 aa6.48□□□□□ -1.37
TMEM39A-202ENST00000438581 OR8A1Q8NGG7 326 aa6.48□□□□□ -1.37
TMEM39A-202ENST00000438581 M0R381 172 aa6.48□□□□□ -1.37
TMEM39A-202ENST00000438581 VWC2Q2TAL6 325 aa6.48□□□□□ -1.37
TMEM39A-202ENST00000438581 CRIP3Q6Q6R5 217 aa6.48□□□□□ -1.37
TMEM39A-202ENST00000438581 C8orf86Q6ZUL3 223 aa6.48□□□□□ -1.37
TMEM39A-202ENST00000438581 TRGV9Q99603 122 aa6.48□□□□□ -1.37
TMEM39A-202ENST00000438581 XIRP2A4UGR9 3374 aa6.48□□□□□ -1.37
TMEM39A-202ENST00000438581 NPIPB6E9PJ23 425 aa6.48□□□□□ -1.37
TMEM39A-202ENST00000438581 C19orf84I3L1E1 186 aa6.48□□□□□ -1.37
TMEM39A-202ENST00000438581 GP9P14770 177 aa6.48□□□□□ -1.37
TMEM39A-202ENST00000438581 IL15RAQ13261 267 aa6.48□□□□□ -1.37
TMEM39A-202ENST00000438581 FBXL19-AS1Q494R0 122 aa6.48□□□□□ -1.37
TMEM39A-202ENST00000438581 AMMECR1LQ6DCA0 310 aa6.48□□□□□ -1.37
TMEM39A-202ENST00000438581 HAPLN4Q86UW8 402 aa6.48□□□□□ -1.37
TMEM39A-202ENST00000438581 DTX2Q86UW9 622 aa6.48□□□□□ -1.37
TMEM39A-202ENST00000438581 OTORQ9NRC9 128 aa6.48□□□□□ -1.37
TMEM39A-202ENST00000438581 PLA2G5P39877 138 aa6.48□□□□□ -1.37
TMEM39A-202ENST00000438581 TMEM191AQ9H0A3 160 aa6.48□□□□□ -1.37
TMEM39A-202ENST00000438581 BPTFQ12830 3046 aa6.47□□□□□ -1.37
TMEM39A-202ENST00000438581 TRAV8-1A0A0A6YYK1 113 aa6.47□□□□□ -1.37
TMEM39A-202ENST00000438581 M0R3E3 92 aa6.47□□□□□ -1.37
TMEM39A-202ENST00000438581 IGLC2P0DOY2 106 aa6.47□□□□□ -1.37
TMEM39A-202ENST00000438581 IGLC3P0DOY3 106 aa6.47□□□□□ -1.37
TMEM39A-202ENST00000438581 PPIFP30405 207 aaKnown RBP6.47□□□□□ -1.37
TMEM39A-202ENST00000438581 FAM120AOSQ5T036 256 aa6.47□□□□□ -1.37
TMEM39A-202ENST00000438581 LYPD6BQ8NI32 183 aa6.47□□□□□ -1.37
TMEM39A-202ENST00000438581 MCRIP2Q9BUT9 160 aaKnown RBP6.47□□□□□ -1.37
TMEM39A-202ENST00000438581 TANC2Q9HCD6 1990 aa6.47□□□□□ -1.37
TMEM39A-202ENST00000438581 TRAV1-1A0A0B4J248 108 aa6.47□□□□□ -1.37
TMEM39A-202ENST00000438581 C9JQL5 133 aa6.47□□□□□ -1.37
TMEM39A-202ENST00000438581 NSUN5P1Q3KNT7 163 aa6.47□□□□□ -1.37
TMEM39A-202ENST00000438581 SIGLEC15Q6ZMC9 328 aa6.47□□□□□ -1.37
TMEM39A-202ENST00000438581 RNF183Q96D59 192 aa6.47□□□□□ -1.37
TMEM39A-202ENST00000438581 NACAE9PAV3 2078 aa6.47□□□□□ -1.37
TMEM39A-202ENST00000438581 MST1LQ2TV78 715 aa6.47□□□□□ -1.37
TMEM39A-202ENST00000438581 SPSB3Q6PJ21 355 aa6.47□□□□□ -1.37
TMEM39A-202ENST00000438581 ADAMTSL5Q6ZMM2 481 aa6.47□□□□□ -1.37
TMEM39A-202ENST00000438581 YPEL4Q96NS1 127 aa6.47□□□□□ -1.37
TMEM39A-202ENST00000438581 IL36BQ9NZH7 164 aa6.47□□□□□ -1.37
TMEM39A-202ENST00000438581 TRBV9A0A0B4J1U6 114 aa6.46□□□□□ -1.37
TMEM39A-202ENST00000438581 TMEM89A2RUT3 159 aa6.46□□□□□ -1.37
TMEM39A-202ENST00000438581 ATP5LO75964 103 aa6.46□□□□□ -1.37
TMEM39A-202ENST00000438581 IFITM1P13164 125 aa6.46□□□□□ -1.37
TMEM39A-202ENST00000438581 GAGE2BQ13066 116 aa6.46□□□□□ -1.37
TMEM39A-202ENST00000438581 GAGE2EQ4V326 116 aa6.46□□□□□ -1.37
TMEM39A-202ENST00000438581 PRR31Q5SQ13 230 aa6.46□□□□□ -1.37
TMEM39A-202ENST00000438581 TCF23Q7RTU1 214 aa6.46□□□□□ -1.37
TMEM39A-202ENST00000438581 PIP4P2Q8N4L2 257 aa6.46□□□□□ -1.37
TMEM39A-202ENST00000438581 LINC00479Q96M42 142 aa6.46□□□□□ -1.37
TMEM39A-202ENST00000438581 GAGE2DQ9UEU5 116 aa6.46□□□□□ -1.37
TMEM39A-202ENST00000438581 IGKV2-40A0A087WW87 121 aaPredicted RBP6.46□□□□□ -1.38
TMEM39A-202ENST00000438581 HIGD1CA8MV81 97 aa6.46□□□□□ -1.38
TMEM39A-202ENST00000438581 USP17L23D6RBM5 183 aa6.46□□□□□ -1.38
TMEM39A-202ENST00000438581 IGKV2D-40P01614 121 aaPredicted RBP6.46□□□□□ -1.38
TMEM39A-202ENST00000438581 TAL2Q16559 108 aa6.46□□□□□ -1.38
TMEM39A-202ENST00000438581 Q6ZPA2 131 aa6.46□□□□□ -1.38
TMEM39A-202ENST00000438581 FAM19A5Q7Z5A7 132 aaPredicted RBP6.46□□□□□ -1.38
TMEM39A-202ENST00000438581 ZNF502Q8TBZ5 544 aa6.46□□□□□ -1.38
TMEM39A-202ENST00000438581 WIPF2Q8TF74 440 aaPredicted RBP6.46□□□□□ -1.38
TMEM39A-202ENST00000438581 YTHDF2Q9Y5A9 579 aaKnown RBP6.46□□□□□ -1.38
TMEM39A-202ENST00000438581 ACANP16112 2415 aa6.46□□□□□ -1.38
TMEM39A-202ENST00000438581 NPIPB5A8MRT5 1133 aa6.46□□□□□ -1.38
TMEM39A-202ENST00000438581 FNDC10F2Z333 226 aa6.46□□□□□ -1.38
TMEM39A-202ENST00000438581 ZNF841Q6ZN19 808 aa6.46□□□□□ -1.38
TMEM39A-202ENST00000438581 SYT8Q8NBV8 401 aa6.46□□□□□ -1.38
TMEM39A-202ENST00000438581 FMC1Q96HJ9 113 aa6.46□□□□□ -1.38
TMEM39A-202ENST00000438581 C9orf118A6NHY6 69 aa6.46□□□□□ -1.38
TMEM39A-202ENST00000438581 J3QLI3 93 aa6.46□□□□□ -1.38
TMEM39A-202ENST00000438581 OVOL3O00110 214 aa6.46□□□□□ -1.38
TMEM39A-202ENST00000438581 SNCGO76070 127 aa6.46□□□□□ -1.38
TMEM39A-202ENST00000438581 CRYGDP07320 174 aa6.46□□□□□ -1.38
TMEM39A-202ENST00000438581 ZNF688P0C7X2 276 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms