RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 PAFAH1B2P68402 229 aa5.24□□□□□ -1.57
LSM3P3-201ENST00000436601 PSG3Q16557 428 aa5.24□□□□□ -1.57
LSM3P3-201ENST00000436601 ARL6IP6Q8N6S5 226 aa5.24□□□□□ -1.57
LSM3P3-201ENST00000436601 OR2K2Q8NGT1 345 aa5.24□□□□□ -1.57
LSM3P3-201ENST00000436601 CMTM2Q8TAZ6 248 aa5.24□□□□□ -1.57
LSM3P3-201ENST00000436601 C2CD4CQ8TF44 421 aa5.24□□□□□ -1.57
LSM3P3-201ENST00000436601 HIST1H2BAQ96A08 127 aa5.24□□□□□ -1.57
LSM3P3-201ENST00000436601 MRPL53Q96EL3 112 aaKnown RBP5.24□□□□□ -1.57
LSM3P3-201ENST00000436601 LINC00052Q96N35 136 aa5.24□□□□□ -1.57
LSM3P3-201ENST00000436601 SPAG8Q99932 426 aaPredicted RBP5.24□□□□□ -1.57
LSM3P3-201ENST00000436601 TCEAL7Q9BRU2 100 aa5.24□□□□□ -1.57
LSM3P3-201ENST00000436601 ATG101Q9BSB4 218 aa5.24□□□□□ -1.57
LSM3P3-201ENST00000436601 DERL1Q9BUN8 251 aa5.24□□□□□ -1.57
LSM3P3-201ENST00000436601 CTDSP1Q9GZU7 261 aa5.24□□□□□ -1.57
LSM3P3-201ENST00000436601 PRELID1Q9Y255 219 aa5.24□□□□□ -1.57
LSM3P3-201ENST00000436601 ZNF256Q9Y2P7 627 aaPredicted RBP5.24□□□□□ -1.57
LSM3P3-201ENST00000436601 KLF12Q9Y4X4 402 aa5.24□□□□□ -1.57
LSM3P3-201ENST00000436601 NIPBLQ6KC79 2804 aaeCLIP5.23□□□□□ -1.57
LSM3P3-201ENST00000436601 TRBV20OR9-2A0A075B6H5 130 aa5.23□□□□□ -1.57
LSM3P3-201ENST00000436601 TRAV34A0A0B4J273 112 aa5.23□□□□□ -1.57
LSM3P3-201ENST00000436601 ZNF688P0C7X2 276 aa5.23□□□□□ -1.57
LSM3P3-201ENST00000436601 IGLL1P15814 213 aa5.23□□□□□ -1.57
LSM3P3-201ENST00000436601 ID1P41134 155 aa5.23□□□□□ -1.57
LSM3P3-201ENST00000436601 CSN1S1P47710 185 aa5.23□□□□□ -1.57
LSM3P3-201ENST00000436601 INSL3P51460 131 aa5.23□□□□□ -1.57
LSM3P3-201ENST00000436601 CEBPGP53567 150 aa5.23□□□□□ -1.57
LSM3P3-201ENST00000436601 DEFB1P60022 68 aa5.23□□□□□ -1.57
LSM3P3-201ENST00000436601 GUCA2BQ16661 112 aa5.23□□□□□ -1.57
LSM3P3-201ENST00000436601 C10orf91Q5T1B1 145 aa5.23□□□□□ -1.57
LSM3P3-201ENST00000436601 C9orf66Q5T8R8 295 aa5.23□□□□□ -1.57
LSM3P3-201ENST00000436601 SAMD13Q5VXD3 122 aa5.23□□□□□ -1.57
LSM3P3-201ENST00000436601 GOLT1AQ6ZVE7 132 aa5.23□□□□□ -1.57
LSM3P3-201ENST00000436601 RPUSD4Q96CM3 377 aaKnown RBP5.23□□□□□ -1.57
LSM3P3-201ENST00000436601 SGK494Q96LW2 274 aa5.23□□□□□ -1.57
LSM3P3-201ENST00000436601 VGLL1Q99990 258 aa5.23□□□□□ -1.57
LSM3P3-201ENST00000436601 MCRIP2Q9BUT9 160 aaKnown RBP5.23□□□□□ -1.57
LSM3P3-201ENST00000436601 PARLQ9H300 379 aa5.23□□□□□ -1.57
LSM3P3-201ENST00000436601 CLEC5AQ9NY25 188 aa5.23□□□□□ -1.57
LSM3P3-201ENST00000436601 RPH3ALQ9UNE2 315 aa5.23□□□□□ -1.57
LSM3P3-201ENST00000436601 IGKV2-40A0A087WW87 121 aaPredicted RBP5.22□□□□□ -1.57
LSM3P3-201ENST00000436601 TRAV8-1A0A0A6YYK1 113 aa5.22□□□□□ -1.57
LSM3P3-201ENST00000436601 OR4C46A6NHA9 309 aa5.22□□□□□ -1.57
LSM3P3-201ENST00000436601 F6UB75 175 aa5.22□□□□□ -1.57
LSM3P3-201ENST00000436601 F8W036 122 aa5.22□□□□□ -1.57
LSM3P3-201ENST00000436601 ATP6V1G1O75348 118 aa5.22□□□□□ -1.57
LSM3P3-201ENST00000436601 IGKV2D-40P01614 121 aaPredicted RBP5.22□□□□□ -1.57
LSM3P3-201ENST00000436601 ZNF705DP0CH99 300 aaPredicted RBP5.22□□□□□ -1.57
LSM3P3-201ENST00000436601 ZNF705BP0CI00 300 aaPredicted RBP5.22□□□□□ -1.57
LSM3P3-201ENST00000436601 AKR1C3P42330 323 aa5.22□□□□□ -1.57
LSM3P3-201ENST00000436601 RPL35P42766 123 aaKnown RBP5.22□□□□□ -1.57
LSM3P3-201ENST00000436601 SNRPD3P62318 126 aaKnown RBP5.22□□□□□ -1.57
LSM3P3-201ENST00000436601 ERCC8Q13216 396 aa5.22□□□□□ -1.57
LSM3P3-201ENST00000436601 TMEM183BQ1AE95 376 aa5.22□□□□□ -1.57
LSM3P3-201ENST00000436601 ZNF674Q2M3X9 581 aa5.22□□□□□ -1.57
LSM3P3-201ENST00000436601 PSMG4Q5JS54 123 aa5.22□□□□□ -1.57
LSM3P3-201ENST00000436601 SOHLH1Q5JUK2 328 aa5.22□□□□□ -1.57
LSM3P3-201ENST00000436601 ZNF738Q8NE65 137 aa5.22□□□□□ -1.57
LSM3P3-201ENST00000436601 IL17DQ8TAD2 202 aa5.22□□□□□ -1.57
LSM3P3-201ENST00000436601 IGF2BP2-AS1Q96M15 143 aa5.22□□□□□ -1.57
LSM3P3-201ENST00000436601 AGPAT4-IT1Q9H0P7 198 aa5.22□□□□□ -1.57
LSM3P3-201ENST00000436601 JMJD1CQ15652 2540 aa5.21□□□□□ -1.58
LSM3P3-201ENST00000436601 TRBV6-1A0A0K0K1D8 114 aa5.21□□□□□ -1.58
LSM3P3-201ENST00000436601 SERTM2A0A1B0GWG4 89 aa5.21□□□□□ -1.58
LSM3P3-201ENST00000436601 RBAKDNA6NC62 111 aa5.21□□□□□ -1.58
LSM3P3-201ENST00000436601 ZNF727A8MUV8 499 aa5.21□□□□□ -1.58
LSM3P3-201ENST00000436601 KRBOX1C9JBD0 128 aa5.21□□□□□ -1.58
LSM3P3-201ENST00000436601 IGLV2-8P01709 118 aa5.21□□□□□ -1.58
LSM3P3-201ENST00000436601 S100A9P06702 114 aaKnown RBP5.21□□□□□ -1.58
LSM3P3-201ENST00000436601 CNN1P51911 297 aaKnown RBP5.21□□□□□ -1.58
LSM3P3-201ENST00000436601 TAS2R60P59551 318 aa5.21□□□□□ -1.58
LSM3P3-201ENST00000436601 DEFB131AP59861 70 aa5.21□□□□□ -1.58
LSM3P3-201ENST00000436601 KRTAP19-4Q3LI73 84 aa5.21□□□□□ -1.58
LSM3P3-201ENST00000436601 ODF3L2Q3SX64 289 aa5.21□□□□□ -1.58
LSM3P3-201ENST00000436601 FAM74A3Q4VXF1 159 aa5.21□□□□□ -1.58
LSM3P3-201ENST00000436601 GDF5OSQ5U4N7 250 aa5.21□□□□□ -1.58
LSM3P3-201ENST00000436601 C9orf47Q6ZRZ4 202 aa5.21□□□□□ -1.58
LSM3P3-201ENST00000436601 TMEM75Q8N9X5 138 aa5.21□□□□□ -1.58
LSM3P3-201ENST00000436601 OR8A1Q8NGG7 326 aa5.21□□□□□ -1.58
LSM3P3-201ENST00000436601 TVP23CQ96ET8 276 aa5.21□□□□□ -1.58
LSM3P3-201ENST00000436601 FMC1Q96HJ9 113 aa5.21□□□□□ -1.58
LSM3P3-201ENST00000436601 ASCL2Q99929 193 aa5.21□□□□□ -1.58
LSM3P3-201ENST00000436601 SMIM7Q9BQ49 75 aa5.21□□□□□ -1.58
LSM3P3-201ENST00000436601 SEC11CQ9BY50 192 aa5.21□□□□□ -1.58
LSM3P3-201ENST00000436601 MAP6D1Q9H9H5 199 aa5.21□□□□□ -1.58
LSM3P3-201ENST00000436601 PSG8Q9UQ74 426 aa5.21□□□□□ -1.58
LSM3P3-201ENST00000436601 CARHSP1Q9Y2V2 147 aaKnown RBP5.21□□□□□ -1.58
LSM3P3-201ENST00000436601 A0A0J9YX75 114 aa5.2□□□□□ -1.58
LSM3P3-201ENST00000436601 KNCNA6PVL3 124 aa5.2□□□□□ -1.58
LSM3P3-201ENST00000436601 C9JCJ5 164 aa5.2□□□□□ -1.58
LSM3P3-201ENST00000436601 K7EQM0 130 aa5.2□□□□□ -1.58
LSM3P3-201ENST00000436601 LTAP01374 205 aa5.2□□□□□ -1.58
LSM3P3-201ENST00000436601 CD7P09564 240 aa5.2□□□□□ -1.58
LSM3P3-201ENST00000436601 GNG4P50150 75 aa5.2□□□□□ -1.58
LSM3P3-201ENST00000436601 UBE2G1P62253 170 aa5.2□□□□□ -1.58
LSM3P3-201ENST00000436601 FLI1Q01543 452 aaPredicted RBP5.2□□□□□ -1.58
LSM3P3-201ENST00000436601 HIST1H1AQ02539 215 aaPredicted RBP5.2□□□□□ -1.58
LSM3P3-201ENST00000436601 TMEM241Q24JQ0 296 aa5.2□□□□□ -1.58
LSM3P3-201ENST00000436601 CENPWQ5EE01 88 aa5.2□□□□□ -1.58
LSM3P3-201ENST00000436601 PRNTQ86SH4 94 aa5.2□□□□□ -1.58
LSM3P3-201ENST00000436601 Q86TA4 180 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms