RNA–Protein interactions for RNA: ENST00000436374.5

CCDC144A-209, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-209ENST00000436374 HLA-DRB4X5D2U9 266 aa13.16□□□□□ -0.3
CCDC144A-209ENST00000436374 ZNF705FA8MVS1 300 aaPredicted RBP13.15□□□□□ -0.3
CCDC144A-209ENST00000436374 HLA-DMBP28068 263 aa13.15□□□□□ -0.3
CCDC144A-209ENST00000436374 TSPOP30536 169 aa13.15□□□□□ -0.3
CCDC144A-209ENST00000436374 ZNF138P52744 262 aa13.15□□□□□ -0.3
CCDC144A-209ENST00000436374 GNG5P63218 68 aa13.15□□□□□ -0.3
CCDC144A-209ENST00000436374 HIST1H1AQ02539 215 aaPredicted RBP13.15□□□□□ -0.3
CCDC144A-209ENST00000436374 STHQ8IWL8 128 aa13.15□□□□□ -0.3
CCDC144A-209ENST00000436374 FAM24BQ8N5W8 94 aa13.15□□□□□ -0.3
CCDC144A-209ENST00000436374 C9JCJ5 164 aa13.14□□□□□ -0.31
CCDC144A-209ENST00000436374 RPL35P42766 123 aaKnown RBP13.14□□□□□ -0.31
CCDC144A-209ENST00000436374 FLI1Q01543 452 aaPredicted RBP13.14□□□□□ -0.31
CCDC144A-209ENST00000436374 DNAH9Q9NYC9 4486 aa13.13□□□□□ -0.31
CCDC144A-209ENST00000436374 KRBOX1C9JBD0 128 aa13.13□□□□□ -0.31
CCDC144A-209ENST00000436374 AMBPP02760 352 aa13.13□□□□□ -0.31
CCDC144A-209ENST00000436374 SFTA3P0C7M3 94 aa13.13□□□□□ -0.31
CCDC144A-209ENST00000436374 LEPP41159 167 aa13.13□□□□□ -0.31
CCDC144A-209ENST00000436374 GNG4P50150 75 aa13.13□□□□□ -0.31
CCDC144A-209ENST00000436374 CEBPGP53567 150 aa13.13□□□□□ -0.31
CCDC144A-209ENST00000436374 ACTL10Q5JWF8 245 aa13.13□□□□□ -0.31
CCDC144A-209ENST00000436374 SMIM7Q9BQ49 75 aa13.13□□□□□ -0.31
CCDC144A-209ENST00000436374 NIPSNAP3BQ9BS92 247 aa13.13□□□□□ -0.31
CCDC144A-209ENST00000436374 PARLQ9H300 379 aa13.13□□□□□ -0.31
CCDC144A-209ENST00000436374 PSG8Q9UQ74 426 aa13.13□□□□□ -0.31
CCDC144A-209ENST00000436374 LY96Q9Y6Y9 160 aa13.13□□□□□ -0.31
CCDC144A-209ENST00000436374 IGKV2-40A0A087WW87 121 aaPredicted RBP13.12□□□□□ -0.31
CCDC144A-209ENST00000436374 TMEM218A2RU14 115 aa13.12□□□□□ -0.31
CCDC144A-209ENST00000436374 ZNF727A8MUV8 499 aa13.12□□□□□ -0.31
CCDC144A-209ENST00000436374 IGKV2D-40P01614 121 aaPredicted RBP13.12□□□□□ -0.31
CCDC144A-209ENST00000436374 CD7P09564 240 aa13.12□□□□□ -0.31
CCDC144A-209ENST00000436374 ZNF492Q9P255 531 aa13.12□□□□□ -0.31
CCDC144A-209ENST00000436374 PRAC2D3DTV9 90 aa13.11□□□□□ -0.31
CCDC144A-209ENST00000436374 H3BMM0 161 aa13.11□□□□□ -0.31
CCDC144A-209ENST00000436374 SRSF3P84103 164 aaKnown RBP13.11□□□□□ -0.31
CCDC144A-209ENST00000436374 ZNF674Q2M3X9 581 aa13.11□□□□□ -0.31
CCDC144A-209ENST00000436374 MORN3Q6PF18 240 aaPredicted RBP13.11□□□□□ -0.31
CCDC144A-209ENST00000436374 BAGE2Q86Y30 109 aa13.11□□□□□ -0.31
CCDC144A-209ENST00000436374 OR4B1Q8NGF8 309 aa13.11□□□□□ -0.31
CCDC144A-209ENST00000436374 SEC11CQ9BY50 192 aa13.11□□□□□ -0.31
CCDC144A-209ENST00000436374 AGPAT4-IT1Q9H0P7 198 aa13.11□□□□□ -0.31
CCDC144A-209ENST00000436374 C19orf73Q9NVV2 129 aa13.11□□□□□ -0.31
CCDC144A-209ENST00000436374 A8MTW9 85 aa13.1□□□□□ -0.31
CCDC144A-209ENST00000436374 LTAP01374 205 aa13.1□□□□□ -0.31
CCDC144A-209ENST00000436374 CT45A10P0DMU9 189 aa13.1□□□□□ -0.31
CCDC144A-209ENST00000436374 KRTAP10-11P60412 298 aa13.1□□□□□ -0.31
CCDC144A-209ENST00000436374 PRNTQ86SH4 94 aa13.1□□□□□ -0.31
CCDC144A-209ENST00000436374 Q86TA4 180 aa13.1□□□□□ -0.31
CCDC144A-209ENST00000436374 APRG1Q8IVJ8 170 aa13.1□□□□□ -0.31
CCDC144A-209ENST00000436374 CITED4Q96RK1 184 aa13.1□□□□□ -0.31
CCDC144A-209ENST00000436374 VGLL1Q99990 258 aa13.1□□□□□ -0.31
CCDC144A-209ENST00000436374 C1QTNF4Q9BXJ3 329 aa13.1□□□□□ -0.31
CCDC144A-209ENST00000436374 F8W036 122 aa13.09□□□□□ -0.31
CCDC144A-209ENST00000436374 PNRC1Q12796 327 aaPredicted RBP13.09□□□□□ -0.31
CCDC144A-209ENST00000436374 TMEM241Q24JQ0 296 aa13.09□□□□□ -0.31
CCDC144A-209ENST00000436374 PRR25Q96S07 402 aa13.09□□□□□ -0.31
CCDC144A-209ENST00000436374 TUBA4BQ9H853 241 aa13.09□□□□□ -0.31
CCDC144A-209ENST00000436374 NAT8Q9UHE5 227 aa13.09□□□□□ -0.31
CCDC144A-209ENST00000436374 F6UB75 175 aa13.08□□□□□ -0.32
CCDC144A-209ENST00000436374 IGLV2-11P01706 119 aa13.08□□□□□ -0.32
CCDC144A-209ENST00000436374 CRISP2P16562 243 aa13.08□□□□□ -0.32
CCDC144A-209ENST00000436374 SMUG1Q53HV7 270 aa13.08□□□□□ -0.32
CCDC144A-209ENST00000436374 CENPWQ5EE01 88 aa13.08□□□□□ -0.32
CCDC144A-209ENST00000436374 COX8CQ7Z4L0 72 aa13.08□□□□□ -0.32
CCDC144A-209ENST00000436374 TRPT1Q86TN4 253 aaKnown RBP13.08□□□□□ -0.32
CCDC144A-209ENST00000436374 TMEM183AQ8IXX5 376 aa13.08□□□□□ -0.32
CCDC144A-209ENST00000436374 TRAV8-1A0A0A6YYK1 113 aa13.07□□□□□ -0.32
CCDC144A-209ENST00000436374 TRAV34A0A0B4J273 112 aa13.07□□□□□ -0.32
CCDC144A-209ENST00000436374 KNCNA6PVL3 124 aa13.07□□□□□ -0.32
CCDC144A-209ENST00000436374 A8MZ25 164 aa13.07□□□□□ -0.32
CCDC144A-209ENST00000436374 C9JQL5 133 aa13.07□□□□□ -0.32
CCDC144A-209ENST00000436374 K7EIL1 84 aa13.07□□□□□ -0.32
CCDC144A-209ENST00000436374 CDKN1BP46527 198 aa13.07□□□□□ -0.32
CCDC144A-209ENST00000436374 ERCC8Q13216 396 aa13.07□□□□□ -0.32
CCDC144A-209ENST00000436374 Q8N1Y9 231 aa13.07□□□□□ -0.32
CCDC144A-209ENST00000436374 IGF2BP2-AS1Q96M15 143 aa13.07□□□□□ -0.32
CCDC144A-209ENST00000436374 LINC00479Q96M42 142 aa13.07□□□□□ -0.32
CCDC144A-209ENST00000436374 DERL1Q9BUN8 251 aa13.07□□□□□ -0.32
CCDC144A-209ENST00000436374 KIR2DL5BA0A0G2JN68 375 aa13.06□□□□□ -0.32
CCDC144A-209ENST00000436374 KIR2DL5BA0A0G2JPC4 375 aa13.06□□□□□ -0.32
CCDC144A-209ENST00000436374 APOC4P55056 127 aa13.06□□□□□ -0.32
CCDC144A-209ENST00000436374 GDF5OSQ5U4N7 250 aa13.06□□□□□ -0.32
CCDC144A-209ENST00000436374 KIR2DL5AQ8N109 375 aa13.06□□□□□ -0.32
CCDC144A-209ENST00000436374 KIR2DL5BQ8NHK3 375 aa13.06□□□□□ -0.32
CCDC144A-209ENST00000436374 FAM19A4Q96LR4 140 aa13.06□□□□□ -0.32
CCDC144A-209ENST00000436374 ASCL2Q99929 193 aa13.06□□□□□ -0.32
CCDC144A-209ENST00000436374 C20orf144Q9BQM9 153 aa13.06□□□□□ -0.32
CCDC144A-209ENST00000436374 SRD5A3Q9H8P0 318 aa13.06□□□□□ -0.32
CCDC144A-209ENST00000436374 LOC102724200A0A096LPH7 203 aaPredicted RBP13.05□□□□□ -0.32
CCDC144A-209ENST00000436374 GPX1P07203 203 aa13.05□□□□□ -0.32
CCDC144A-209ENST00000436374 DEFB125Q8N687 156 aa13.05□□□□□ -0.32
CCDC144A-209ENST00000436374 TVP23CQ96ET8 276 aa13.05□□□□□ -0.32
CCDC144A-209ENST00000436374 MLST8Q9BVC4 326 aa13.05□□□□□ -0.32
CCDC144A-209ENST00000436374 UBE2CO00762 179 aa13.04□□□□□ -0.32
CCDC144A-209ENST00000436374 ZNF705DP0CH99 300 aaPredicted RBP13.04□□□□□ -0.32
CCDC144A-209ENST00000436374 ZNF705BP0CI00 300 aaPredicted RBP13.04□□□□□ -0.32
CCDC144A-209ENST00000436374 SLC7A5P1Q8MH63 180 aa13.04□□□□□ -0.32
CCDC144A-209ENST00000436374 Q8TAT8 98 aa13.04□□□□□ -0.32
CCDC144A-209ENST00000436374 CARHSP1Q9Y2V2 147 aaKnown RBP13.04□□□□□ -0.32
CCDC144A-209ENST00000436374 KLLNB2CW77 178 aa13.03□□□□□ -0.32
CCDC144A-209ENST00000436374 C10orf91Q5T1B1 145 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms