RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 NPIPB6E9PJ23 425 aa17.12■□□□□ 0.33
CPSF4-204ENST00000436336 LTAP01374 205 aa17.12■□□□□ 0.33
CPSF4-204ENST00000436336 ERCC8Q13216 396 aa17.12■□□□□ 0.33
CPSF4-204ENST00000436336 ODF3L2Q3SX64 289 aa17.12■□□□□ 0.33
CPSF4-204ENST00000436336 TMEM78Q5T7P6 136 aa17.12■□□□□ 0.33
CPSF4-204ENST00000436336 EBLN2Q6P2I7 272 aa17.12■□□□□ 0.33
CPSF4-204ENST00000436336 FOXI2Q6ZQN5 318 aa17.12■□□□□ 0.33
CPSF4-204ENST00000436336 BAGE2Q86Y30 109 aa17.12■□□□□ 0.33
CPSF4-204ENST00000436336 FAM110AQ9BQ89 295 aa17.12■□□□□ 0.33
CPSF4-204ENST00000436336 AGPAT4-IT1Q9H0P7 198 aa17.12■□□□□ 0.33
CPSF4-204ENST00000436336 SAV1Q9H4B6 383 aaPredicted RBP17.12■□□□□ 0.33
CPSF4-204ENST00000436336 ANK2Q01484 3957 aa17.11■□□□□ 0.33
CPSF4-204ENST00000436336 A0A0J9YX75 114 aa17.11■□□□□ 0.33
CPSF4-204ENST00000436336 ZNF705DP0CH99 300 aaPredicted RBP17.11■□□□□ 0.33
CPSF4-204ENST00000436336 ZNF705BP0CI00 300 aaPredicted RBP17.11■□□□□ 0.33
CPSF4-204ENST00000436336 HIST1H1AQ02539 215 aaPredicted RBP17.11■□□□□ 0.33
CPSF4-204ENST00000436336 TVP23CQ96ET8 276 aa17.11■□□□□ 0.33
CPSF4-204ENST00000436336 LINC00477Q96M19 166 aa17.11■□□□□ 0.33
CPSF4-204ENST00000436336 SDF2L1Q9HCN8 221 aa17.11■□□□□ 0.33
CPSF4-204ENST00000436336 PPP1R14DQ9NXH3 145 aa17.11■□□□□ 0.33
CPSF4-204ENST00000436336 ZFP30Q9Y2G7 519 aa17.11■□□□□ 0.33
CPSF4-204ENST00000436336 LY96Q9Y6Y9 160 aa17.11■□□□□ 0.33
CPSF4-204ENST00000436336 OR11H12B2RN74 326 aa17.1■□□□□ 0.33
CPSF4-204ENST00000436336 APOC3P02656 99 aa17.1■□□□□ 0.33
CPSF4-204ENST00000436336 GDF5OSQ5U4N7 250 aa17.1■□□□□ 0.33
CPSF4-204ENST00000436336 SMIM12Q96EX1 92 aa17.1■□□□□ 0.33
CPSF4-204ENST00000436336 PGPEP1LA6NFU8 196 aa17.1■□□□□ 0.33
CPSF4-204ENST00000436336 ZNF138P52744 262 aa17.1■□□□□ 0.33
CPSF4-204ENST00000436336 PNRC1Q12796 327 aaPredicted RBP17.1■□□□□ 0.33
CPSF4-204ENST00000436336 ZNF492Q9P255 531 aa17.1■□□□□ 0.33
CPSF4-204ENST00000436336 KRTAP21-3Q3LHN1 58 aa17.09■□□□□ 0.33
CPSF4-204ENST00000436336 OCC1Q8TAD7 63 aa17.09■□□□□ 0.33
CPSF4-204ENST00000436336 Q8TAT8 98 aa17.09■□□□□ 0.33
CPSF4-204ENST00000436336 AGRNO00468 2067 aa17.09■□□□□ 0.33
CPSF4-204ENST00000436336 DUSP14O95147 198 aaKnown RBP17.08■□□□□ 0.32
CPSF4-204ENST00000436336 IGLV2-8P01709 118 aa17.08■□□□□ 0.32
CPSF4-204ENST00000436336 CD7P09564 240 aa17.08■□□□□ 0.32
CPSF4-204ENST00000436336 RPL23P62829 140 aaKnown RBP17.08■□□□□ 0.32
CPSF4-204ENST00000436336 SAPCD1Q5SSQ6 148 aa17.08■□□□□ 0.32
CPSF4-204ENST00000436336 LINC01551Q86U37 167 aa17.08■□□□□ 0.32
CPSF4-204ENST00000436336 NDFIP1Q9BT67 221 aa17.08■□□□□ 0.32
CPSF4-204ENST00000436336 MLST8Q9BVC4 326 aa17.08■□□□□ 0.32
CPSF4-204ENST00000436336 APRG1Q8IVJ8 170 aa17.07■□□□□ 0.32
CPSF4-204ENST00000436336 TMEM183AQ8IXX5 376 aa17.07■□□□□ 0.32
CPSF4-204ENST00000436336 PRR25Q96S07 402 aa17.07■□□□□ 0.32
CPSF4-204ENST00000436336 LENEPQ9Y5L5 61 aa17.07■□□□□ 0.32
CPSF4-204ENST00000436336 NOTCH3Q9UM47 2321 aa17.07■□□□□ 0.32
CPSF4-204ENST00000436336 HLA-DRB4P13762 266 aa17.07■□□□□ 0.32
CPSF4-204ENST00000436336 SVBPQ8N300 66 aa17.07■□□□□ 0.32
CPSF4-204ENST00000436336 NHLRC2Q8NBF2 726 aa17.07■□□□□ 0.32
CPSF4-204ENST00000436336 HLA-DRB4X5D2U9 266 aa17.07■□□□□ 0.32
CPSF4-204ENST00000436336 ADIRFQ15847 76 aa17.06■□□□□ 0.32
CPSF4-204ENST00000436336 ZNF124Q15973 351 aa17.06■□□□□ 0.32
CPSF4-204ENST00000436336 OXLD1Q5BKU9 147 aa17.06■□□□□ 0.32
CPSF4-204ENST00000436336 ACTL10Q5JWF8 245 aa17.06■□□□□ 0.32
CPSF4-204ENST00000436336 GTSCR1Q86UQ5 136 aa17.06■□□□□ 0.32
CPSF4-204ENST00000436336 ASCL2Q99929 193 aa17.06■□□□□ 0.32
CPSF4-204ENST00000436336 C19orf73Q9NVV2 129 aa17.06■□□□□ 0.32
CPSF4-204ENST00000436336 KNCNA6PVL3 124 aa17.05■□□□□ 0.32
CPSF4-204ENST00000436336 CT45A10P0DMU9 189 aa17.05■□□□□ 0.32
CPSF4-204ENST00000436336 AURKAIP1Q9NWT8 199 aaPredicted RBP17.05■□□□□ 0.32
CPSF4-204ENST00000436336 TRBV7-9A0A0J9YWB2 115 aa17.04■□□□□ 0.32
CPSF4-204ENST00000436336 CMYA5Q8N3K9 4069 aa17.04■□□□□ 0.32
CPSF4-204ENST00000436336 H3BMM0 161 aa17.04■□□□□ 0.32
CPSF4-204ENST00000436336 K7EN84 100 aa17.04■□□□□ 0.32
CPSF4-204ENST00000436336 MGST1P10620 155 aaKnown RBP17.04■□□□□ 0.32
CPSF4-204ENST00000436336 COX8CQ7Z4L0 72 aa17.04■□□□□ 0.32
CPSF4-204ENST00000436336 OR4B1Q8NGF8 309 aa17.04■□□□□ 0.32
CPSF4-204ENST00000436336 FAM19A4Q96LR4 140 aa17.04■□□□□ 0.32
CPSF4-204ENST00000436336 ODF3Q96PU9 254 aa17.04■□□□□ 0.32
CPSF4-204ENST00000436336 A8MTW9 85 aa17.03■□□□□ 0.32
CPSF4-204ENST00000436336 M0R036 132 aa17.03■□□□□ 0.32
CPSF4-204ENST00000436336 SNAPINO95295 136 aa17.03■□□□□ 0.32
CPSF4-204ENST00000436336 GCGP01275 180 aa17.03■□□□□ 0.32
CPSF4-204ENST00000436336 C8orf49Q96NF6 230 aa17.03■□□□□ 0.32
CPSF4-204ENST00000436336 BIN3Q9NQY0 253 aa17.03■□□□□ 0.32
CPSF4-204ENST00000436336 CLRN3Q8NCR9 226 aa17.02■□□□□ 0.32
CPSF4-204ENST00000436336 ISOC2Q96AB3 205 aa17.02■□□□□ 0.32
CPSF4-204ENST00000436336 ZC2HC1AQ96GY0 325 aa17.01■□□□□ 0.31
CPSF4-204ENST00000436336 ZMAT5Q9UDW3 170 aaKnown RBP17.01■□□□□ 0.31
CPSF4-204ENST00000436336 IGKV3-20P01619 116 aa17.01■□□□□ 0.31
CPSF4-204ENST00000436336 CRISP2P16562 243 aa17.01■□□□□ 0.31
CPSF4-204ENST00000436336 EGFEM1PQ0D2K5 195 aa17.01■□□□□ 0.31
CPSF4-204ENST00000436336 OR5I1Q13606 314 aa17.01■□□□□ 0.31
CPSF4-204ENST00000436336 SMUG1Q53HV7 270 aa17.01■□□□□ 0.31
CPSF4-204ENST00000436336 STHQ8IWL8 128 aa17.01■□□□□ 0.31
CPSF4-204ENST00000436336 CLUHP3Q96NS8 147 aa17.01■□□□□ 0.31
CPSF4-204ENST00000436336 B4DEV8 164 aa17■□□□□ 0.31
CPSF4-204ENST00000436336 PRR27Q6MZM9 219 aa16.99■□□□□ 0.31
CPSF4-204ENST00000436336 AMTNQ6UX39 209 aa16.99■□□□□ 0.31
CPSF4-204ENST00000436336 WFDC10AQ9H1F0 79 aa16.99■□□□□ 0.31
CPSF4-204ENST00000436336 LEPP41159 167 aa16.99■□□□□ 0.31
CPSF4-204ENST00000436336 ZFAND2AQ8N6M9 145 aa16.99■□□□□ 0.31
CPSF4-204ENST00000436336 RHEBQ15382 184 aa16.98■□□□□ 0.31
CPSF4-204ENST00000436336 TRPT1Q86TN4 253 aaKnown RBP16.98■□□□□ 0.31
CPSF4-204ENST00000436336 TSPOP30536 169 aa16.97■□□□□ 0.31
CPSF4-204ENST00000436336 SAMD5Q5TGI4 173 aa16.97■□□□□ 0.31
CPSF4-204ENST00000436336 SFRP2Q96HF1 295 aa16.97■□□□□ 0.31
CPSF4-204ENST00000436336 RBMY1BA6NDE4 496 aaKnown RBP16.96■□□□□ 0.31
CPSF4-204ENST00000436336 RBMY1EA6NEQ0 496 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms