RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 RNASE2P10153 161 aaKnown RBP9.01□□□□□ -0.97
SCN4A-201ENST00000435607 DEFB113Q30KQ7 82 aa9.01□□□□□ -0.97
SCN4A-201ENST00000435607 MPZP25189 248 aa9□□□□□ -0.97
SCN4A-201ENST00000435607 LAIR2Q6ISS4 152 aa9□□□□□ -0.97
SCN4A-201ENST00000435607 FOXI2Q6ZQN5 318 aa9□□□□□ -0.97
SCN4A-201ENST00000435607 PRB4P10163 310 aaPredicted RBP9□□□□□ -0.97
SCN4A-201ENST00000435607 Q86TA4 180 aa9□□□□□ -0.97
SCN4A-201ENST00000435607 Q8NFD4 153 aa9□□□□□ -0.97
SCN4A-201ENST00000435607 HS3ST6Q96QI5 342 aa9□□□□□ -0.97
SCN4A-201ENST00000435607 RNF126Q9BV68 326 aa9□□□□□ -0.97
SCN4A-201ENST00000435607 THSD7AQ9UPZ6 1657 aa9□□□□□ -0.97
SCN4A-201ENST00000435607 A0A0J9YY99 117 aa9□□□□□ -0.97
SCN4A-201ENST00000435607 SDHAF1A6NFY7 115 aa9□□□□□ -0.97
SCN4A-201ENST00000435607 GP9P14770 177 aa9□□□□□ -0.97
SCN4A-201ENST00000435607 CFHR4Q92496 578 aa9□□□□□ -0.97
SCN4A-201ENST00000435607 NOP10Q9NPE3 64 aaKnown RBP9□□□□□ -0.97
SCN4A-201ENST00000435607 WISP1O95388 367 aa9□□□□□ -0.97
SCN4A-201ENST00000435607 XCL1P47992 114 aa9□□□□□ -0.97
SCN4A-201ENST00000435607 CAMK2N2Q96S95 79 aa9□□□□□ -0.97
SCN4A-201ENST00000435607 PYGO2Q9BRQ0 406 aa9□□□□□ -0.97
SCN4A-201ENST00000435607 IGKV1D-17A0A075B6S4 117 aa9□□□□□ -0.97
SCN4A-201ENST00000435607 TRAV1-1A0A0B4J248 108 aa9□□□□□ -0.97
SCN4A-201ENST00000435607 MST1P26927 711 aa9□□□□□ -0.97
SCN4A-201ENST00000435607 CREBBPQ92793 2442 aa8.99□□□□□ -0.97
SCN4A-201ENST00000435607 SMKR1H3BMG3 65 aa8.99□□□□□ -0.97
SCN4A-201ENST00000435607 SYS1-DBNDD2H3BUS1 97 aa8.99□□□□□ -0.97
SCN4A-201ENST00000435607 Q5BKY6 102 aa8.99□□□□□ -0.97
SCN4A-201ENST00000435607 BVES-AS1Q5T3Y7 98 aa8.99□□□□□ -0.97
SCN4A-201ENST00000435607 MRPL53Q96EL3 112 aaKnown RBP8.99□□□□□ -0.97
SCN4A-201ENST00000435607 CSRP3P50461 194 aa8.99□□□□□ -0.97
SCN4A-201ENST00000435607 RNF152Q8N8N0 203 aa8.99□□□□□ -0.97
SCN4A-201ENST00000435607 WDR90Q96KV7 1748 aa8.99□□□□□ -0.97
SCN4A-201ENST00000435607 PRSS46E5RG02 174 aa8.99□□□□□ -0.97
SCN4A-201ENST00000435607 F8W735 103 aaPredicted RBP8.99□□□□□ -0.97
SCN4A-201ENST00000435607 CRYGCP07315 174 aa8.99□□□□□ -0.97
SCN4A-201ENST00000435607 TRAV12-1A0A0B4J245 112 aa8.99□□□□□ -0.97
SCN4A-201ENST00000435607 C2orf66Q6UXQ4 117 aa8.99□□□□□ -0.97
SCN4A-201ENST00000435607 COL11A2P13942 1736 aaPredicted RBP8.99□□□□□ -0.97
SCN4A-201ENST00000435607 TRAV3A0A0B4J244 114 aa8.99□□□□□ -0.97
SCN4A-201ENST00000435607 IGHV3-38A0A0C4DH36 116 aa8.99□□□□□ -0.97
SCN4A-201ENST00000435607 MP68P56378 58 aa8.99□□□□□ -0.97
SCN4A-201ENST00000435607 C14orf177Q52M58 125 aa8.99□□□□□ -0.97
SCN4A-201ENST00000435607 LINC01551Q86U37 167 aa8.99□□□□□ -0.97
SCN4A-201ENST00000435607 LRRC37AA6NMS7 1700 aa8.99□□□□□ -0.97
SCN4A-201ENST00000435607 IGHV7-4-1A0A0J9YVY3 117 aa8.99□□□□□ -0.97
SCN4A-201ENST00000435607 NDUFA12Q9UI09 145 aa8.99□□□□□ -0.97
SCN4A-201ENST00000435607 TCF15Q12870 199 aa8.98□□□□□ -0.97
SCN4A-201ENST00000435607 GLRX5Q86SX6 157 aa8.98□□□□□ -0.97
SCN4A-201ENST00000435607 TRAV12-2A0A075B6T6 113 aa8.98□□□□□ -0.97
SCN4A-201ENST00000435607 RNF222A6NCQ9 220 aa8.98□□□□□ -0.97
SCN4A-201ENST00000435607 TRACP01848 142 aa8.98□□□□□ -0.97
SCN4A-201ENST00000435607 IGFL3Q6UXB1 125 aa8.98□□□□□ -0.97
SCN4A-201ENST00000435607 C16orf74Q96GX8 76 aa8.98□□□□□ -0.97
SCN4A-201ENST00000435607 Q8N8P6 123 aa8.98□□□□□ -0.97
SCN4A-201ENST00000435607 CITED1Q99966 193 aa8.98□□□□□ -0.97
SCN4A-201ENST00000435607 A0A1W2PPI3 338 aa8.98□□□□□ -0.97
SCN4A-201ENST00000435607 IGLL5B9A064 214 aa8.98□□□□□ -0.97
SCN4A-201ENST00000435607 ATP5G1P05496 136 aa8.98□□□□□ -0.97
SCN4A-201ENST00000435607 TMEM14EPQ6UXP3 125 aa8.98□□□□□ -0.97
SCN4A-201ENST00000435607 OR11H6Q8NGC7 330 aa8.98□□□□□ -0.97
SCN4A-201ENST00000435607 KIR3DS1Q14943 382 aa8.98□□□□□ -0.97
SCN4A-201ENST00000435607 IGKV1D-12P01611 117 aa8.97□□□□□ -0.97
SCN4A-201ENST00000435607 C8orf31Q8N9H6 132 aa8.97□□□□□ -0.97
SCN4A-201ENST00000435607 TBX6O95947 436 aaPredicted RBP8.97□□□□□ -0.97
SCN4A-201ENST00000435607 FAM231BA6NCW3 169 aa8.97□□□□□ -0.97
SCN4A-201ENST00000435607 Q6P435 159 aa8.97□□□□□ -0.97
SCN4A-201ENST00000435607 Q8TCH9 128 aa8.97□□□□□ -0.97
SCN4A-201ENST00000435607 PLXND1Q9Y4D7 1925 aa8.97□□□□□ -0.97
SCN4A-201ENST00000435607 NTF4P34130 210 aa8.97□□□□□ -0.97
SCN4A-201ENST00000435607 C5orf47Q569G3 176 aa8.97□□□□□ -0.97
SCN4A-201ENST00000435607 TRBV24-1A0A075B6N3 115 aa8.97□□□□□ -0.97
SCN4A-201ENST00000435607 G3V318 75 aa8.97□□□□□ -0.97
SCN4A-201ENST00000435607 HERV-K104P63124 156 aa8.97□□□□□ -0.97
SCN4A-201ENST00000435607 C8orf49Q96NF6 230 aa8.97□□□□□ -0.97
SCN4A-201ENST00000435607 SPINK8P0C7L1 97 aa8.96□□□□□ -0.97
SCN4A-201ENST00000435607 SPANXCQ9NY87 97 aa8.96□□□□□ -0.97
SCN4A-201ENST00000435607 IGKV1-12A0A0C4DH73 117 aa8.96□□□□□ -0.97
SCN4A-201ENST00000435607 PRR30Q53SZ7 412 aaPredicted RBP8.96□□□□□ -0.97
SCN4A-201ENST00000435607 MYLKQ15746 1914 aa8.96□□□□□ -0.97
SCN4A-201ENST00000435607 SHANK1Q9Y566 2161 aa8.96□□□□□ -0.98
SCN4A-201ENST00000435607 A0A087X0K7 114 aa8.96□□□□□ -0.98
SCN4A-201ENST00000435607 ORMDL1Q9P0S3 153 aa8.96□□□□□ -0.98
SCN4A-201ENST00000435607 PTPRDP23468 1912 aa8.96□□□□□ -0.98
SCN4A-201ENST00000435607 hDV102S1A0JD36 115 aa8.96□□□□□ -0.98
SCN4A-201ENST00000435607 Q6ZQT7 251 aa8.96□□□□□ -0.98
SCN4A-201ENST00000435607 A0A0A6YYD4 124 aa8.96□□□□□ -0.98
SCN4A-201ENST00000435607 ZNF492Q9P255 531 aa8.96□□□□□ -0.98
SCN4A-201ENST00000435607 LCTP09848 1927 aa8.96□□□□□ -0.98
SCN4A-201ENST00000435607 C9JQL5 133 aa8.96□□□□□ -0.98
SCN4A-201ENST00000435607 IGLV2-23P01705 113 aa8.95□□□□□ -0.98
SCN4A-201ENST00000435607 SLC25A29Q8N8R3 303 aa8.95□□□□□ -0.98
SCN4A-201ENST00000435607 HIST1H2BKO60814 126 aa8.95□□□□□ -0.98
SCN4A-201ENST00000435607 HIST1H2BJP06899 126 aa8.95□□□□□ -0.98
SCN4A-201ENST00000435607 HIST1H2BOP23527 126 aa8.95□□□□□ -0.98
SCN4A-201ENST00000435607 HIST1H2BBP33778 126 aa8.95□□□□□ -0.98
SCN4A-201ENST00000435607 HIST1H2BDP58876 126 aa8.95□□□□□ -0.98
SCN4A-201ENST00000435607 HIST1H2BCP62807 126 aa8.95□□□□□ -0.98
SCN4A-201ENST00000435607 HIST2H2BEQ16778 126 aa8.95□□□□□ -0.98
SCN4A-201ENST00000435607 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.95□□□□□ -0.98
SCN4A-201ENST00000435607 HIST1H2BHQ93079 126 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms