RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 TREM1Q9NP99 234 aa17.15■□□□□ 0.34
SMARCAL1-208ENST00000434435 NBEAL1Q6ZS30 2694 aa17.14■□□□□ 0.34
SMARCAL1-208ENST00000434435 TRAV8-1A0A0A6YYK1 113 aa17.14■□□□□ 0.33
SMARCAL1-208ENST00000434435 SRP19P09132 144 aaKnown RBP17.14■□□□□ 0.33
SMARCAL1-208ENST00000434435 UBE2G1P62253 170 aa17.14■□□□□ 0.33
SMARCAL1-208ENST00000434435 FMC1Q96HJ9 113 aa17.14■□□□□ 0.33
SMARCAL1-208ENST00000434435 AGPAT4-IT1Q9H0P7 198 aa17.14■□□□□ 0.33
SMARCAL1-208ENST00000434435 AURKAIP1Q9NWT8 199 aaPredicted RBP17.14■□□□□ 0.33
SMARCAL1-208ENST00000434435 TRAV34A0A0B4J273 112 aa17.13■□□□□ 0.33
SMARCAL1-208ENST00000434435 A8MTW9 85 aa17.13■□□□□ 0.33
SMARCAL1-208ENST00000434435 IGKV3-20P01619 116 aa17.13■□□□□ 0.33
SMARCAL1-208ENST00000434435 S100A9P06702 114 aaKnown RBP17.13■□□□□ 0.33
SMARCAL1-208ENST00000434435 FLI1Q01543 452 aaPredicted RBP17.13■□□□□ 0.33
SMARCAL1-208ENST00000434435 TRPT1Q86TN4 253 aaKnown RBP17.13■□□□□ 0.33
SMARCAL1-208ENST00000434435 LINC00479Q96M42 142 aa17.13■□□□□ 0.33
SMARCAL1-208ENST00000434435 CLUHP3Q96NS8 147 aa17.13■□□□□ 0.33
SMARCAL1-208ENST00000434435 TUBA4BQ9H853 241 aa17.13■□□□□ 0.33
SMARCAL1-208ENST00000434435 PPP1R14DQ9NXH3 145 aa17.13■□□□□ 0.33
SMARCAL1-208ENST00000434435 ZNF138P52744 262 aa17.12■□□□□ 0.33
SMARCAL1-208ENST00000434435 CEBPGP53567 150 aa17.12■□□□□ 0.33
SMARCAL1-208ENST00000434435 TMEM183BQ1AE95 376 aa17.12■□□□□ 0.33
SMARCAL1-208ENST00000434435 UQCC3Q6UW78 93 aa17.12■□□□□ 0.33
SMARCAL1-208ENST00000434435 Q8TAT8 98 aa17.12■□□□□ 0.33
SMARCAL1-208ENST00000434435 SGK494Q96LW2 274 aa17.12■□□□□ 0.33
SMARCAL1-208ENST00000434435 PSG8Q9UQ74 426 aa17.12■□□□□ 0.33
SMARCAL1-208ENST00000434435 KLF12Q9Y4X4 402 aa17.12■□□□□ 0.33
SMARCAL1-208ENST00000434435 IGLV2-11P01706 119 aa17.11■□□□□ 0.33
SMARCAL1-208ENST00000434435 CT45A10P0DMU9 189 aa17.11■□□□□ 0.33
SMARCAL1-208ENST00000434435 IGHV4-30-4P0DP06 118 aa17.11■□□□□ 0.33
SMARCAL1-208ENST00000434435 Q86TA4 180 aa17.11■□□□□ 0.33
SMARCAL1-208ENST00000434435 ODF3Q96PU9 254 aa17.11■□□□□ 0.33
SMARCAL1-208ENST00000434435 DERL1Q9BUN8 251 aa17.11■□□□□ 0.33
SMARCAL1-208ENST00000434435 ZNF492Q9P255 531 aa17.11■□□□□ 0.33
SMARCAL1-208ENST00000434435 TRBV6-1A0A0K0K1D8 114 aa17.1■□□□□ 0.33
SMARCAL1-208ENST00000434435 C9JQL5 133 aa17.1■□□□□ 0.33
SMARCAL1-208ENST00000434435 RPL35AP18077 110 aaKnown RBP17.1■□□□□ 0.33
SMARCAL1-208ENST00000434435 RPL35P42766 123 aaKnown RBP17.1■□□□□ 0.33
SMARCAL1-208ENST00000434435 PRNTQ86SH4 94 aa17.1■□□□□ 0.33
SMARCAL1-208ENST00000434435 EIF4E3Q8N5X7 224 aaKnown RBP17.1■□□□□ 0.33
SMARCAL1-208ENST00000434435 NDFIP1Q9BT67 221 aa17.1■□□□□ 0.33
SMARCAL1-208ENST00000434435 SLC35B3Q9H1N7 401 aa17.1■□□□□ 0.33
SMARCAL1-208ENST00000434435 PARLQ9H300 379 aa17.1■□□□□ 0.33
SMARCAL1-208ENST00000434435 LENEPQ9Y5L5 61 aa17.1■□□□□ 0.33
SMARCAL1-208ENST00000434435 RBMY1BA6NDE4 496 aaKnown RBP17.09■□□□□ 0.33
SMARCAL1-208ENST00000434435 RBMY1EA6NEQ0 496 aaKnown RBP17.09■□□□□ 0.33
SMARCAL1-208ENST00000434435 PRB2P02812 416 aaPredicted RBP17.09■□□□□ 0.33
SMARCAL1-208ENST00000434435 RBMY1DP0C7P1 496 aaKnown RBP17.09■□□□□ 0.33
SMARCAL1-208ENST00000434435 TAS2R60P59551 318 aa17.09■□□□□ 0.33
SMARCAL1-208ENST00000434435 AMTNQ6UX39 209 aa17.09■□□□□ 0.33
SMARCAL1-208ENST00000434435 LOC102724200A0A096LPH7 203 aaPredicted RBP17.08■□□□□ 0.32
SMARCAL1-208ENST00000434435 LEPP41159 167 aa17.08■□□□□ 0.32
SMARCAL1-208ENST00000434435 ZNF674Q2M3X9 581 aa17.08■□□□□ 0.32
SMARCAL1-208ENST00000434435 TRBV7-9A0A0J9YWB2 115 aa17.07■□□□□ 0.32
SMARCAL1-208ENST00000434435 A8MZ25 164 aa17.07■□□□□ 0.32
SMARCAL1-208ENST00000434435 TSPOP30536 169 aa17.07■□□□□ 0.32
SMARCAL1-208ENST00000434435 NUTF2P61970 127 aaKnown RBP17.07■□□□□ 0.32
SMARCAL1-208ENST00000434435 MORN3Q6PF18 240 aaPredicted RBP17.07■□□□□ 0.32
SMARCAL1-208ENST00000434435 K7EIL1 84 aa17.06■□□□□ 0.32
SMARCAL1-208ENST00000434435 CENPWQ5EE01 88 aa17.06■□□□□ 0.32
SMARCAL1-208ENST00000434435 SAPCD1Q5SSQ6 148 aa17.06■□□□□ 0.32
SMARCAL1-208ENST00000434435 FAM19A4Q96LR4 140 aa17.06■□□□□ 0.32
SMARCAL1-208ENST00000434435 ASCL2Q99929 193 aa17.06■□□□□ 0.32
SMARCAL1-208ENST00000434435 ZFP30Q9Y2G7 519 aa17.06■□□□□ 0.32
SMARCAL1-208ENST00000434435 LTAP01374 205 aa17.05■□□□□ 0.32
SMARCAL1-208ENST00000434435 AMBPP02760 352 aa17.05■□□□□ 0.32
SMARCAL1-208ENST00000434435 CRISP2P16562 243 aa17.05■□□□□ 0.32
SMARCAL1-208ENST00000434435 NDUFA5Q16718 116 aa17.05■□□□□ 0.32
SMARCAL1-208ENST00000434435 SPINK13Q1W4C9 94 aa17.05■□□□□ 0.32
SMARCAL1-208ENST00000434435 IGF2BP2-AS1Q96M15 143 aa17.05■□□□□ 0.32
SMARCAL1-208ENST00000434435 SMIM7Q9BQ49 75 aa17.05■□□□□ 0.32
SMARCAL1-208ENST00000434435 ZNF727A8MUV8 499 aa17.04■□□□□ 0.32
SMARCAL1-208ENST00000434435 M0R2Z0 102 aa17.04■□□□□ 0.32
SMARCAL1-208ENST00000434435 SFTA3P0C7M3 94 aa17.04■□□□□ 0.32
SMARCAL1-208ENST00000434435 CDKN1BP46527 198 aa17.04■□□□□ 0.32
SMARCAL1-208ENST00000434435 GNG4P50150 75 aa17.04■□□□□ 0.32
SMARCAL1-208ENST00000434435 APOC4P55056 127 aa17.04■□□□□ 0.32
SMARCAL1-208ENST00000434435 FXYD7P58549 80 aa17.04■□□□□ 0.32
SMARCAL1-208ENST00000434435 SOHLH1Q5JUK2 328 aa17.04■□□□□ 0.32
SMARCAL1-208ENST00000434435 BAGE2Q86Y30 109 aa17.04■□□□□ 0.32
SMARCAL1-208ENST00000434435 TVP23CQ96ET8 276 aa17.04■□□□□ 0.32
SMARCAL1-208ENST00000434435 C9JCJ5 164 aa17.03■□□□□ 0.32
SMARCAL1-208ENST00000434435 FAM74A3Q4VXF1 159 aa17.03■□□□□ 0.32
SMARCAL1-208ENST00000434435 ZFAND2AQ8N6M9 145 aa17.03■□□□□ 0.32
SMARCAL1-208ENST00000434435 TRBV20OR9-2A0A075B6H5 130 aa17.02■□□□□ 0.32
SMARCAL1-208ENST00000434435 KIR2DL5BA0A0G2JN68 375 aa17.02■□□□□ 0.32
SMARCAL1-208ENST00000434435 KIR2DL5BA0A0G2JPC4 375 aa17.02■□□□□ 0.32
SMARCAL1-208ENST00000434435 J3KRW8 73 aa17.02■□□□□ 0.32
SMARCAL1-208ENST00000434435 TMEM183AQ8IXX5 376 aa17.02■□□□□ 0.32
SMARCAL1-208ENST00000434435 KIR2DL5AQ8N109 375 aa17.02■□□□□ 0.32
SMARCAL1-208ENST00000434435 KIR2DL5BQ8NHK3 375 aa17.02■□□□□ 0.32
SMARCAL1-208ENST00000434435 C8orf49Q96NF6 230 aa17.02■□□□□ 0.32
SMARCAL1-208ENST00000434435 C1QTNF4Q9BXJ3 329 aa17.02■□□□□ 0.32
SMARCAL1-208ENST00000434435 CSTL1Q9H114 145 aa17.02■□□□□ 0.32
SMARCAL1-208ENST00000434435 KLLNB2CW77 178 aa17.01■□□□□ 0.31
SMARCAL1-208ENST00000434435 CA1P00915 261 aaPredicted RBP17.01■□□□□ 0.31
SMARCAL1-208ENST00000434435 GPX1P07203 203 aa17.01■□□□□ 0.31
SMARCAL1-208ENST00000434435 FRMD6-AS1P0C7T7 363 aa17.01■□□□□ 0.31
SMARCAL1-208ENST00000434435 SMUG1Q53HV7 270 aa17.01■□□□□ 0.31
SMARCAL1-208ENST00000434435 LINC00322Q6ZN03 302 aaPredicted RBP17.01■□□□□ 0.31
SMARCAL1-208ENST00000434435 SMIM12Q96EX1 92 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms