RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 PRAC2D3DTV9 90 aa13.66□□□□□ -0.22
HMGN1-206ENST00000431390 SAP30O75446 220 aa13.66□□□□□ -0.22
HMGN1-206ENST00000431390 IGLV2-8P01709 118 aa13.66□□□□□ -0.22
HMGN1-206ENST00000431390 TFPI2P48307 235 aa13.66□□□□□ -0.22
HMGN1-206ENST00000431390 OR2K2Q8NGT1 345 aa13.66□□□□□ -0.22
HMGN1-206ENST00000431390 SGK494Q96LW2 274 aa13.66□□□□□ -0.22
HMGN1-206ENST00000431390 SPAG8Q99932 426 aaPredicted RBP13.66□□□□□ -0.22
HMGN1-206ENST00000431390 ZFP30Q9Y2G7 519 aa13.66□□□□□ -0.22
HMGN1-206ENST00000431390 C7orf77A4D0Y5 90 aa13.65□□□□□ -0.22
HMGN1-206ENST00000431390 MLST8Q9BVC4 326 aa13.65□□□□□ -0.22
HMGN1-206ENST00000431390 IGLV1-51P01701 117 aa13.64□□□□□ -0.23
HMGN1-206ENST00000431390 C9orf47Q6ZRZ4 202 aa13.64□□□□□ -0.23
HMGN1-206ENST00000431390 PRNTQ86SH4 94 aa13.64□□□□□ -0.23
HMGN1-206ENST00000431390 ISOC2Q96AB3 205 aa13.64□□□□□ -0.23
HMGN1-206ENST00000431390 VGLL1Q99990 258 aa13.64□□□□□ -0.23
HMGN1-206ENST00000431390 OR4C46A6NHA9 309 aa13.63□□□□□ -0.23
HMGN1-206ENST00000431390 K7EN84 100 aa13.63□□□□□ -0.23
HMGN1-206ENST00000431390 GCGP01275 180 aa13.63□□□□□ -0.23
HMGN1-206ENST00000431390 TMEM183AQ8IXX5 376 aa13.63□□□□□ -0.23
HMGN1-206ENST00000431390 FAM24BQ8N5W8 94 aa13.63□□□□□ -0.23
HMGN1-206ENST00000431390 AURKAIP1Q9NWT8 199 aaPredicted RBP13.63□□□□□ -0.23
HMGN1-206ENST00000431390 NOTCH1P46531 2555 aa13.63□□□□□ -0.23
HMGN1-206ENST00000431390 A0A087WWC5 75 aa13.62□□□□□ -0.23
HMGN1-206ENST00000431390 ZNF688P0C7X2 276 aa13.62□□□□□ -0.23
HMGN1-206ENST00000431390 PRB4P10163 310 aaPredicted RBP13.62□□□□□ -0.23
HMGN1-206ENST00000431390 OR10J6PQ8NGY7 276 aa13.62□□□□□ -0.23
HMGN1-206ENST00000431390 RPS10P5Q9NQ39 176 aa13.62□□□□□ -0.23
HMGN1-206ENST00000431390 BIN3Q9NQY0 253 aa13.62□□□□□ -0.23
HMGN1-206ENST00000431390 PPP1R14DQ9NXH3 145 aa13.62□□□□□ -0.23
HMGN1-206ENST00000431390 PSMG4Q5JS54 123 aa13.62□□□□□ -0.23
HMGN1-206ENST00000431390 SAPCD1Q5SSQ6 148 aa13.62□□□□□ -0.23
HMGN1-206ENST00000431390 TMEM78Q5T7P6 136 aa13.62□□□□□ -0.23
HMGN1-206ENST00000431390 OR8A1Q8NGG7 326 aa13.62□□□□□ -0.23
HMGN1-206ENST00000431390 AGPAT4-IT1Q9H0P7 198 aa13.62□□□□□ -0.23
HMGN1-206ENST00000431390 IZUMO1RA6ND01 250 aa13.61□□□□□ -0.23
HMGN1-206ENST00000431390 NPIPB6E9PJ23 425 aa13.61□□□□□ -0.23
HMGN1-206ENST00000431390 MT-ND4LP03901 98 aa13.61□□□□□ -0.23
HMGN1-206ENST00000431390 MGST1P10620 155 aaKnown RBP13.61□□□□□ -0.23
HMGN1-206ENST00000431390 INSL3P51460 131 aa13.61□□□□□ -0.23
HMGN1-206ENST00000431390 ERCC8Q13216 396 aa13.61□□□□□ -0.23
HMGN1-206ENST00000431390 NHLRC2Q8NBF2 726 aa13.61□□□□□ -0.23
HMGN1-206ENST00000431390 LINC00477Q96M19 166 aa13.61□□□□□ -0.23
HMGN1-206ENST00000431390 PRR25Q96S07 402 aa13.61□□□□□ -0.23
HMGN1-206ENST00000431390 NDFIP1Q9BT67 221 aa13.61□□□□□ -0.23
HMGN1-206ENST00000431390 ZNF256Q9Y2P7 627 aaPredicted RBP13.61□□□□□ -0.23
HMGN1-206ENST00000431390 ZNF138P52744 262 aa13.6□□□□□ -0.23
HMGN1-206ENST00000431390 RNF212Q495C1 297 aa13.6□□□□□ -0.23
HMGN1-206ENST00000431390 COX8CQ7Z4L0 72 aa13.6□□□□□ -0.23
HMGN1-206ENST00000431390 ANAPC16Q96DE5 110 aa13.6□□□□□ -0.23
HMGN1-206ENST00000431390 SFRP2Q96HF1 295 aa13.6□□□□□ -0.23
HMGN1-206ENST00000431390 CTDSP1Q9GZU7 261 aa13.6□□□□□ -0.23
HMGN1-206ENST00000431390 TMEM242Q9NWH2 141 aa13.6□□□□□ -0.23
HMGN1-206ENST00000431390 ZNF492Q9P255 531 aa13.6□□□□□ -0.23
HMGN1-206ENST00000431390 LENEPQ9Y5L5 61 aa13.6□□□□□ -0.23
HMGN1-206ENST00000431390 SCO1O75880 301 aa13.59□□□□□ -0.23
HMGN1-206ENST00000431390 OR5I1Q13606 314 aa13.59□□□□□ -0.23
HMGN1-206ENST00000431390 C9orf66Q5T8R8 295 aa13.59□□□□□ -0.23
HMGN1-206ENST00000431390 PPP1R2P9O14990 202 aa13.58□□□□□ -0.23
HMGN1-206ENST00000431390 WFDC9Q8NEX5 89 aa13.58□□□□□ -0.23
HMGN1-206ENST00000431390 Q8TAT8 98 aa13.58□□□□□ -0.23
HMGN1-206ENST00000431390 MCRIP2Q9BUT9 160 aaKnown RBP13.58□□□□□ -0.23
HMGN1-206ENST00000431390 OSTCQ9NRP0 149 aa13.58□□□□□ -0.23
HMGN1-206ENST00000431390 F6UB75 175 aa13.58□□□□□ -0.24
HMGN1-206ENST00000431390 CD33P20138 364 aa13.58□□□□□ -0.24
HMGN1-206ENST00000431390 HIST1H1AQ02539 215 aaPredicted RBP13.58□□□□□ -0.24
HMGN1-206ENST00000431390 FOXI2Q6ZQN5 318 aa13.58□□□□□ -0.24
HMGN1-206ENST00000431390 FAM231DQ6ZW35 169 aa13.58□□□□□ -0.24
HMGN1-206ENST00000431390 SAV1Q9H4B6 383 aaPredicted RBP13.58□□□□□ -0.24
HMGN1-206ENST00000431390 TRBV7-9A0A0J9YWB2 115 aa13.57□□□□□ -0.24
HMGN1-206ENST00000431390 A0A0J9YX75 114 aa13.57□□□□□ -0.24
HMGN1-206ENST00000431390 ZNF705DP0CH99 300 aaPredicted RBP13.57□□□□□ -0.24
HMGN1-206ENST00000431390 ZNF705BP0CI00 300 aaPredicted RBP13.57□□□□□ -0.24
HMGN1-206ENST00000431390 CMC4P56277 68 aaPredicted RBP13.57□□□□□ -0.24
HMGN1-206ENST00000431390 DEFB131AP59861 70 aa13.57□□□□□ -0.24
HMGN1-206ENST00000431390 DEFB1P60022 68 aa13.57□□□□□ -0.24
HMGN1-206ENST00000431390 ERVFC1-1P60608 527 aa13.57□□□□□ -0.24
HMGN1-206ENST00000431390 EBLN2Q6P2I7 272 aa13.57□□□□□ -0.24
HMGN1-206ENST00000431390 C15orf54Q8N8G6 183 aa13.57□□□□□ -0.24
HMGN1-206ENST00000431390 OR10G8Q8NGN5 311 aa13.57□□□□□ -0.24
HMGN1-206ENST00000431390 ZC2HC1AQ96GY0 325 aa13.57□□□□□ -0.24
HMGN1-206ENST00000431390 C8orf49Q96NF6 230 aa13.57□□□□□ -0.24
HMGN1-206ENST00000431390 GPR61Q9BZJ8 451 aa13.57□□□□□ -0.24
HMGN1-206ENST00000431390 MAP6D1Q9H9H5 199 aa13.57□□□□□ -0.24
HMGN1-206ENST00000431390 DUSP14O95147 198 aaKnown RBP13.56□□□□□ -0.24
HMGN1-206ENST00000431390 CT45A10P0DMU9 189 aa13.56□□□□□ -0.24
HMGN1-206ENST00000431390 IBA57Q5T440 356 aaKnown RBP13.56□□□□□ -0.24
HMGN1-206ENST00000431390 PRR27Q6MZM9 219 aa13.56□□□□□ -0.24
HMGN1-206ENST00000431390 ASCL2Q99929 193 aa13.56□□□□□ -0.24
HMGN1-206ENST00000431390 H7BYZ3 331 aa13.55□□□□□ -0.24
HMGN1-206ENST00000431390 SMUG1Q53HV7 270 aa13.55□□□□□ -0.24
HMGN1-206ENST00000431390 GDF5OSQ5U4N7 250 aa13.55□□□□□ -0.24
HMGN1-206ENST00000431390 ODF3Q96PU9 254 aa13.55□□□□□ -0.24
HMGN1-206ENST00000431390 SMCO4Q9NRQ5 59 aa13.55□□□□□ -0.24
HMGN1-206ENST00000431390 C19orf71A6NCJ1 209 aa13.54□□□□□ -0.24
HMGN1-206ENST00000431390 CXorf65A6NEN9 183 aa13.54□□□□□ -0.24
HMGN1-206ENST00000431390 BEAN1Q3B7T3 259 aa13.54□□□□□ -0.24
HMGN1-206ENST00000431390 FAM19A4Q96LR4 140 aa13.54□□□□□ -0.24
HMGN1-206ENST00000431390 FAM110AQ9BQ89 295 aa13.54□□□□□ -0.24
HMGN1-206ENST00000431390 RNASE7Q9H1E1 156 aaKnown RBP13.54□□□□□ -0.24
HMGN1-206ENST00000431390 TUBA4BQ9H853 241 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms