RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 GGTLC1Q9BX51 225 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 CHST6Q9GZX3 395 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 MS4A6AQ9H2W1 248 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 MANBALQ9NQG1 85 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 RPRMQ9NS64 109 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 RABAC1Q9UI14 185 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 ZNF443Q9Y2A4 671 aaPredicted RBP2.9□□□□□ -1.95
HMGB3-203ENST00000430118 IER3IP1Q9Y5U9 82 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 ZNF780BQ9Y6R6 833 aa2.9□□□□□ -1.95
HMGB3-203ENST00000430118 WNK1Q9H4A3 2382 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 TRAV36DV7A0A075B6V5 113 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 A0A0G2JLM5 398 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 ZNF816-ZNF321PA0A0X1KG74 233 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 C7orf71A4D174 169 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 C5orf63A6NC05 138 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 F5H768 121 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 H0YJW9 148 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 PEX7O00628 323 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 RER1O15258 196 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 HMGB3O15347 200 aaKnown RBP2.89□□□□□ -1.95
HMGB3-203ENST00000430118 SOX14O95416 240 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 PRH1P02810 166 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 MT-ND6P03923 174 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 CLPSP04118 112 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 CD3DP04234 171 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 GPX1P07203 203 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 IGHV3-43DP0DP04 118 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 BCL2P10415 239 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 CPMP14384 443 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 MDKP21741 143 aaPredicted RBP2.89□□□□□ -1.95
HMGB3-203ENST00000430118 CFHR2P36980 270 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 PPP1CBP62140 327 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 RPS28P62857 69 aaKnown RBP2.89□□□□□ -1.95
HMGB3-203ENST00000430118 FMODQ06828 376 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 FUT5Q11128 374 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 INSL4Q14641 139 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 SPATA31B1PQ5VZV4 182 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 DGAT2L6Q6ZPD8 337 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 Q6ZVH6 145 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 SGPP2Q8IWX5 399 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 KRTCAP2Q8N6L1 136 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 OR5H2Q8NGV7 314 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 OR6N2Q8NGY6 317 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 VSTM2AQ8TAG5 236 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 C18orf32Q8TCD1 76 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 GNPNAT1Q96EK6 184 aaPredicted RBP2.89□□□□□ -1.95
HMGB3-203ENST00000430118 TMEM101Q96IK0 257 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 KCNS1Q96KK3 526 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 GPER1Q99527 375 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 MRPL32Q9BYC8 188 aaKnown RBP2.89□□□□□ -1.95
HMGB3-203ENST00000430118 COMMD5Q9GZQ3 224 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 AICDAQ9GZX7 198 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 CST11Q9H112 138 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 OR2D2Q9H210 308 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 CCL28Q9NRJ3 127 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 SPANXB1Q9NS25 103 aaPredicted RBP2.89□□□□□ -1.95
HMGB3-203ENST00000430118 AK3Q9UIJ7 227 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 WASHC3Q9Y3C0 194 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 MED31Q9Y3C7 131 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 TRAPPC1Q9Y5R8 145 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 LINC00312Q9Y6C7 94 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 VWFP04275 2813 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 MED12LQ86YW9 2145 aa2.89□□□□□ -1.95
HMGB3-203ENST00000430118 MALRD1Q5VYJ5 2156 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 RYR2Q92736 4967 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 IGKV1D-13A0A0B4J2D9 117 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 A0A1W2PPM0 123 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 DAPL1A0PJW8 107 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 J3KT08 172 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 PLPP1O14494 284 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 FFAR1O14842 300 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 CRXO43186 299 aaPredicted RBP2.88□□□□□ -1.95
HMGB3-203ENST00000430118 SYNGR1O43759 233 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 PITX3O75364 302 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 MPZL1O95297 269 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 MOSP00540 346 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 KRASP01116 189 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 APOA2P02652 100 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 CRYGDP07320 174 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 SPINK8P0C7L1 97 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 IGKV1-13P0DP09 117 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 CRISP2P16562 243 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 IL3RAP26951 378 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 CRYBB3P26998 211 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 DLX6P56179 175 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 RPS11P62280 158 aaKnown RBP eCLIP2.88□□□□□ -1.95
HMGB3-203ENST00000430118 EDDM3AQ14507 147 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 ZNF726P1Q15940 193 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 RPEL1Q2QD12 228 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 MPV17L2Q567V2 206 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 FAM27D1Q5T7N8 215 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 ZNF880Q6PDB4 577 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 SLC25A34Q6PIV7 304 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 GLIPR1L1Q6UWM5 242 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 TMEM256Q8N2U0 113 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 OR52E2Q8NGJ4 325 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 OR51A4Q8NGJ6 313 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 OR10AG1Q8NH19 301 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 OR4A5Q8NH83 315 aa2.88□□□□□ -1.95
HMGB3-203ENST00000430118 OR1L1Q8NH94 360 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms