RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 HIST1H1AQ02539 215 aaPredicted RBP12.23□□□□□ -0.45
UBE3D-204ENST00000430071 MORN3Q6PF18 240 aaPredicted RBP12.23□□□□□ -0.45
UBE3D-204ENST00000430071 AMTNQ6UX39 209 aa12.23□□□□□ -0.45
UBE3D-204ENST00000430071 TMEM167BQ9NRX6 74 aa12.23□□□□□ -0.45
UBE3D-204ENST00000430071 VPS13DQ5THJ4 4388 aa12.23□□□□□ -0.45
UBE3D-204ENST00000430071 ZNF705EA8MWA4 302 aaPredicted RBP12.22□□□□□ -0.45
UBE3D-204ENST00000430071 DUSP14O95147 198 aaKnown RBP12.22□□□□□ -0.45
UBE3D-204ENST00000430071 FXYD7P58549 80 aa12.22□□□□□ -0.45
UBE3D-204ENST00000430071 ALKAL2Q6UX46 152 aa12.22□□□□□ -0.45
UBE3D-204ENST00000430071 SFT2D1Q8WV19 159 aa12.22□□□□□ -0.45
UBE3D-204ENST00000430071 SLC35B3Q9H1N7 401 aa12.22□□□□□ -0.45
UBE3D-204ENST00000430071 OTORQ9NRC9 128 aa12.22□□□□□ -0.45
UBE3D-204ENST00000430071 XCL2Q9UBD3 114 aa12.22□□□□□ -0.45
UBE3D-204ENST00000430071 PGPA6NDG6 321 aa12.21□□□□□ -0.45
UBE3D-204ENST00000430071 RAB5CP51148 216 aa12.21□□□□□ -0.45
UBE3D-204ENST00000430071 KLK5Q9Y337 293 aaPredicted RBP12.21□□□□□ -0.45
UBE3D-204ENST00000430071 IGKV2-40A0A087WW87 121 aaPredicted RBP12.2□□□□□ -0.46
UBE3D-204ENST00000430071 A0A1B0GV50 99 aa12.2□□□□□ -0.46
UBE3D-204ENST00000430071 NPIPB6E9PJ23 425 aa12.2□□□□□ -0.46
UBE3D-204ENST00000430071 IGKV2D-40P01614 121 aaPredicted RBP12.2□□□□□ -0.46
UBE3D-204ENST00000430071 H2AFB1P0C5Y9 115 aa12.2□□□□□ -0.46
UBE3D-204ENST00000430071 OR10J6PQ8NGY7 276 aa12.2□□□□□ -0.46
UBE3D-204ENST00000430071 CELA1Q9UNI1 258 aa12.2□□□□□ -0.46
UBE3D-204ENST00000430071 YTHDF2Q9Y5A9 579 aaKnown RBP12.2□□□□□ -0.46
UBE3D-204ENST00000430071 GGTLC3B5MD39 225 aa12.19□□□□□ -0.46
UBE3D-204ENST00000430071 ERCC8Q13216 396 aa12.19□□□□□ -0.46
UBE3D-204ENST00000430071 DNAH6Q9C0G6 4158 aa12.19□□□□□ -0.46
UBE3D-204ENST00000430071 UBE2G2P60604 165 aa12.18□□□□□ -0.46
UBE3D-204ENST00000430071 NUTF2P61970 127 aaKnown RBP12.18□□□□□ -0.46
UBE3D-204ENST00000430071 ZNF767PQ75MW2 155 aa12.18□□□□□ -0.46
UBE3D-204ENST00000430071 VGLL1Q99990 258 aa12.18□□□□□ -0.46
UBE3D-204ENST00000430071 AGPAT4-IT1Q9H0P7 198 aa12.18□□□□□ -0.46
UBE3D-204ENST00000430071 A0A1W2PRE2 83 aa12.18□□□□□ -0.46
UBE3D-204ENST00000430071 FAM74A7A6NL05 159 aa12.18□□□□□ -0.46
UBE3D-204ENST00000430071 DIRC3C9JPN6 131 aa12.18□□□□□ -0.46
UBE3D-204ENST00000430071 M0R2Z0 102 aa12.18□□□□□ -0.46
UBE3D-204ENST00000430071 CT45A10P0DMU9 189 aa12.18□□□□□ -0.46
UBE3D-204ENST00000430071 MIFP14174 115 aa12.18□□□□□ -0.46
UBE3D-204ENST00000430071 CSN1S1P47710 185 aa12.18□□□□□ -0.46
UBE3D-204ENST00000430071 SUMO1P63165 101 aaKnown RBP12.18□□□□□ -0.46
UBE3D-204ENST00000430071 GNG5P63218 68 aa12.18□□□□□ -0.46
UBE3D-204ENST00000430071 CCL20P78556 96 aa12.18□□□□□ -0.46
UBE3D-204ENST00000430071 SPINK13Q1W4C9 94 aa12.18□□□□□ -0.46
UBE3D-204ENST00000430071 TRAV1-1A0A0B4J248 108 aa12.17□□□□□ -0.46
UBE3D-204ENST00000430071 SLC25A5P05141 298 aaKnown RBP12.17□□□□□ -0.46
UBE3D-204ENST00000430071 C9orf47Q6ZRZ4 202 aa12.17□□□□□ -0.46
UBE3D-204ENST00000430071 Q6ZTC4 211 aa12.17□□□□□ -0.46
UBE3D-204ENST00000430071 CMTM2Q8TAZ6 248 aa12.17□□□□□ -0.46
UBE3D-204ENST00000430071 RXFP4Q8TDU9 374 aa12.17□□□□□ -0.46
UBE3D-204ENST00000430071 RPH3ALQ9UNE2 315 aa12.17□□□□□ -0.46
UBE3D-204ENST00000430071 DNAH10Q8IVF4 4471 aa12.16□□□□□ -0.46
UBE3D-204ENST00000430071 CRXO43186 299 aaPredicted RBP12.16□□□□□ -0.46
UBE3D-204ENST00000430071 ARL6IP6Q8N6S5 226 aa12.16□□□□□ -0.46
UBE3D-204ENST00000430071 C5orf17Q8NAS9 161 aa12.16□□□□□ -0.46
UBE3D-204ENST00000430071 C1QTNF4Q9BXJ3 329 aa12.16□□□□□ -0.46
UBE3D-204ENST00000430071 RBAKDNA6NC62 111 aa12.15□□□□□ -0.46
UBE3D-204ENST00000430071 PAGE4O60829 102 aa12.15□□□□□ -0.46
UBE3D-204ENST00000430071 KIR3DS1Q14943 382 aa12.15□□□□□ -0.46
UBE3D-204ENST00000430071 GOLT1AQ6ZVE7 132 aa12.15□□□□□ -0.46
UBE3D-204ENST00000430071 LINC00477Q96M19 166 aa12.15□□□□□ -0.46
UBE3D-204ENST00000430071 PPP1R14DQ9NXH3 145 aa12.15□□□□□ -0.46
UBE3D-204ENST00000430071 APLNQ9ULZ1 77 aa12.15□□□□□ -0.46
UBE3D-204ENST00000430071 EPDR1Q9UM22 224 aa12.15□□□□□ -0.46
UBE3D-204ENST00000430071 TRAV12-2A0A075B6T6 113 aa12.14□□□□□ -0.47
UBE3D-204ENST00000430071 IGLL5B9A064 214 aa12.14□□□□□ -0.47
UBE3D-204ENST00000430071 TCRAP04437 139 aa12.14□□□□□ -0.47
UBE3D-204ENST00000430071 C12orf74Q32Q52 190 aa12.14□□□□□ -0.47
UBE3D-204ENST00000430071 TMEM78Q5T7P6 136 aa12.14□□□□□ -0.47
UBE3D-204ENST00000430071 ZNF705AQ6ZN79 300 aaPredicted RBP12.14□□□□□ -0.47
UBE3D-204ENST00000430071 Q8TAT8 98 aa12.14□□□□□ -0.47
UBE3D-204ENST00000430071 C2CD4CQ8TF44 421 aa12.14□□□□□ -0.47
UBE3D-204ENST00000430071 FAM19A4Q96LR4 140 aa12.14□□□□□ -0.47
UBE3D-204ENST00000430071 ODF3Q96PU9 254 aa12.14□□□□□ -0.47
UBE3D-204ENST00000430071 IGHV3OR16-12A0A075B7B8 117 aa12.13□□□□□ -0.47
UBE3D-204ENST00000430071 HBE1P02100 147 aa12.13□□□□□ -0.47
UBE3D-204ENST00000430071 AMBPP02760 352 aa12.13□□□□□ -0.47
UBE3D-204ENST00000430071 ATP5G3P48201 142 aa12.13□□□□□ -0.47
UBE3D-204ENST00000430071 LGALS9CQ6DKI2 356 aa12.13□□□□□ -0.47
UBE3D-204ENST00000430071 CCDC28AQ8IWP9 274 aa12.13□□□□□ -0.47
UBE3D-204ENST00000430071 C1orf158Q8N1D5 194 aa12.13□□□□□ -0.47
UBE3D-204ENST00000430071 IGF2BP2-AS1Q96M15 143 aa12.13□□□□□ -0.47
UBE3D-204ENST00000430071 ZNF492Q9P255 531 aa12.13□□□□□ -0.47
UBE3D-204ENST00000430071 ARL2-SNX15V9GYD0 113 aa12.13□□□□□ -0.47
UBE3D-204ENST00000430071 TRAV8-1A0A0A6YYK1 113 aa12.12□□□□□ -0.47
UBE3D-204ENST00000430071 IFNA7P01567 189 aa12.12□□□□□ -0.47
UBE3D-204ENST00000430071 CDKN1BP46527 198 aa12.12□□□□□ -0.47
UBE3D-204ENST00000430071 ZNF138P52744 262 aa12.12□□□□□ -0.47
UBE3D-204ENST00000430071 CST9LP1Q5W188 147 aa12.12□□□□□ -0.47
UBE3D-204ENST00000430071 TEX261Q6UWH6 196 aa12.12□□□□□ -0.47
UBE3D-204ENST00000430071 NKX6-2Q9C056 277 aaPredicted RBP12.12□□□□□ -0.47
UBE3D-204ENST00000430071 GNG13Q9P2W3 67 aa12.12□□□□□ -0.47
UBE3D-204ENST00000430071 TEX46H3BTG2 121 aa12.11□□□□□ -0.47
UBE3D-204ENST00000430071 J3KRW8 73 aa12.11□□□□□ -0.47
UBE3D-204ENST00000430071 PRM2P04554 102 aa12.11□□□□□ -0.47
UBE3D-204ENST00000430071 TSPOP30536 169 aa12.11□□□□□ -0.47
UBE3D-204ENST00000430071 LEPP41159 167 aa12.11□□□□□ -0.47
UBE3D-204ENST00000430071 PPT1P50897 306 aa12.11□□□□□ -0.47
UBE3D-204ENST00000430071 GFI1BQ5VTD9 330 aa12.11□□□□□ -0.47
UBE3D-204ENST00000430071 ZNF680Q8NEM1 530 aa12.11□□□□□ -0.47
UBE3D-204ENST00000430071 ATG101Q9BSB4 218 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 276.9 ms