RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 APOBEC3AP31941 199 aaPredicted RBP9.78□□□□□ -0.84
CDH3-202ENST00000429102 LEPP41159 167 aa9.78□□□□□ -0.84
CDH3-202ENST00000429102 RPL11P62913 178 aaKnown RBP9.78□□□□□ -0.84
CDH3-202ENST00000429102 CDKN1BP46527 198 aa9.78□□□□□ -0.84
CDH3-202ENST00000429102 ARL6IP6Q8N6S5 226 aa9.78□□□□□ -0.84
CDH3-202ENST00000429102 FER1L6-AS1Q8NA97 138 aa9.78□□□□□ -0.84
CDH3-202ENST00000429102 WFDC12Q8WWY7 111 aa9.78□□□□□ -0.84
CDH3-202ENST00000429102 GTSF1LQ9H1H1 148 aa9.78□□□□□ -0.84
CDH3-202ENST00000429102 C21orf62Q9NYP8 219 aa9.78□□□□□ -0.84
CDH3-202ENST00000429102 A0A0G2JLM5 398 aa9.78□□□□□ -0.84
CDH3-202ENST00000429102 CCL21O00585 134 aa9.78□□□□□ -0.84
CDH3-202ENST00000429102 COX8AP10176 69 aa9.78□□□□□ -0.84
CDH3-202ENST00000429102 SMAGPQ0VAQ4 97 aa9.78□□□□□ -0.84
CDH3-202ENST00000429102 C2orf91Q6ZV80 131 aa9.78□□□□□ -0.84
CDH3-202ENST00000429102 OR1N2Q8NGR9 330 aa9.78□□□□□ -0.84
CDH3-202ENST00000429102 OR2K2Q8NGT1 345 aa9.78□□□□□ -0.84
CDH3-202ENST00000429102 COL25A1Q9BXS0 654 aaPredicted RBP9.78□□□□□ -0.84
CDH3-202ENST00000429102 FOXC2Q99958 501 aa9.77□□□□□ -0.84
CDH3-202ENST00000429102 DPM3Q9P2X0 92 aa9.77□□□□□ -0.84
CDH3-202ENST00000429102 MFAP4P55083 255 aa9.77□□□□□ -0.85
CDH3-202ENST00000429102 TMEM30BQ3MIR4 351 aa9.77□□□□□ -0.85
CDH3-202ENST00000429102 HIVEP3Q5T1R4 2406 aa9.77□□□□□ -0.85
CDH3-202ENST00000429102 HRNRQ86YZ3 2850 aaPredicted RBP9.77□□□□□ -0.85
CDH3-202ENST00000429102 RBPJQ06330 500 aa9.77□□□□□ -0.85
CDH3-202ENST00000429102 LINC01545Q5VT33 79 aa9.77□□□□□ -0.85
CDH3-202ENST00000429102 LINC00311Q8N616 119 aa9.77□□□□□ -0.85
CDH3-202ENST00000429102 JMJD8Q96S16 334 aa9.77□□□□□ -0.85
CDH3-202ENST00000429102 TLN2Q9Y4G6 2542 aa9.76□□□□□ -0.85
CDH3-202ENST00000429102 NACAE9PAV3 2078 aa9.76□□□□□ -0.85
CDH3-202ENST00000429102 A0A096LNJ9 63 aa9.76□□□□□ -0.85
CDH3-202ENST00000429102 FAM104BQ5XKR9 115 aa9.76□□□□□ -0.85
CDH3-202ENST00000429102 DYNAPQ8N1N2 210 aa9.76□□□□□ -0.85
CDH3-202ENST00000429102 SOX21Q9Y651 276 aaPredicted RBP9.76□□□□□ -0.85
CDH3-202ENST00000429102 H3BRN7 92 aa9.76□□□□□ -0.85
CDH3-202ENST00000429102 CT83Q5H943 113 aa9.76□□□□□ -0.85
CDH3-202ENST00000429102 G3V318 75 aa9.76□□□□□ -0.85
CDH3-202ENST00000429102 CD5LO43866 347 aa9.76□□□□□ -0.85
CDH3-202ENST00000429102 HBDP02042 147 aa9.76□□□□□ -0.85
CDH3-202ENST00000429102 CLEC3BP05452 202 aa9.76□□□□□ -0.85
CDH3-202ENST00000429102 FAM71F2Q6NXP2 309 aa9.76□□□□□ -0.85
CDH3-202ENST00000429102 GFRA4Q9GZZ7 299 aa9.76□□□□□ -0.85
CDH3-202ENST00000429102 CEACAM4O75871 244 aa9.75□□□□□ -0.85
CDH3-202ENST00000429102 CDSNQ15517 529 aa9.75□□□□□ -0.85
CDH3-202ENST00000429102 CLEC19AQ6UXS0 136 aa9.75□□□□□ -0.85
CDH3-202ENST00000429102 GLMPQ8WWB7 406 aa9.75□□□□□ -0.85
CDH3-202ENST00000429102 IGKV2D-26A0A0A0MRZ7 120 aa9.75□□□□□ -0.85
CDH3-202ENST00000429102 CRXO43186 299 aaPredicted RBP9.75□□□□□ -0.85
CDH3-202ENST00000429102 NDUFA3O95167 84 aa9.75□□□□□ -0.85
CDH3-202ENST00000429102 FABP2P12104 132 aa9.75□□□□□ -0.85
CDH3-202ENST00000429102 AMTNQ6UX39 209 aa9.75□□□□□ -0.85
CDH3-202ENST00000429102 IL17RELQ6ZVW7 336 aa9.75□□□□□ -0.85
CDH3-202ENST00000429102 Q8NA96 180 aa9.75□□□□□ -0.85
CDH3-202ENST00000429102 ARPC1AQ92747 370 aa9.75□□□□□ -0.85
CDH3-202ENST00000429102 FAM208BQ5VWN6 2430 aa9.75□□□□□ -0.85
CDH3-202ENST00000429102 VPS13CQ709C8 3753 aa9.75□□□□□ -0.85
CDH3-202ENST00000429102 CRYGBP07316 175 aa9.75□□□□□ -0.85
CDH3-202ENST00000429102 PIP4P2Q8N4L2 257 aa9.75□□□□□ -0.85
CDH3-202ENST00000429102 PRR25Q96S07 402 aa9.75□□□□□ -0.85
CDH3-202ENST00000429102 PTPN13Q12923 2485 aa9.74□□□□□ -0.85
CDH3-202ENST00000429102 NPIPB6E9PJ23 425 aa9.74□□□□□ -0.85
CDH3-202ENST00000429102 TMEM219Q86XT9 240 aa9.74□□□□□ -0.85
CDH3-202ENST00000429102 LINC01548A6NM66 108 aa9.74□□□□□ -0.85
CDH3-202ENST00000429102 INS-IGF2F8WCM5 200 aa9.74□□□□□ -0.85
CDH3-202ENST00000429102 EFNA4P52798 201 aa9.74□□□□□ -0.85
CDH3-202ENST00000429102 IGFL3Q6UXB1 125 aa9.74□□□□□ -0.85
CDH3-202ENST00000429102 FANCD2OSQ96PS1 177 aa9.74□□□□□ -0.85
CDH3-202ENST00000429102 B9A039 149 aa9.73□□□□□ -0.85
CDH3-202ENST00000429102 TRGV3P03979 118 aa9.73□□□□□ -0.85
CDH3-202ENST00000429102 C5orf64Q2M2E5 130 aa9.73□□□□□ -0.85
CDH3-202ENST00000429102 C15orf32Q32M92 178 aa9.73□□□□□ -0.85
CDH3-202ENST00000429102 TMEM158Q8WZ71 300 aa9.73□□□□□ -0.85
CDH3-202ENST00000429102 MS4A6AQ9H2W1 248 aa9.73□□□□□ -0.85
CDH3-202ENST00000429102 CRYBG3Q68DQ2 2970 aa9.73□□□□□ -0.85
CDH3-202ENST00000429102 TRAV40A0A0B4J280 105 aa9.73□□□□□ -0.85
CDH3-202ENST00000429102 ZC2HC1BQ5TFG8 222 aa9.73□□□□□ -0.85
CDH3-202ENST00000429102 AGRNO00468 2067 aa9.73□□□□□ -0.85
CDH3-202ENST00000429102 M0R381 172 aa9.73□□□□□ -0.85
CDH3-202ENST00000429102 SMAD7O15105 426 aaKnown RBP9.72□□□□□ -0.85
CDH3-202ENST00000429102 SRD5A1P18405 259 aa9.72□□□□□ -0.85
CDH3-202ENST00000429102 EMP1P54849 157 aa9.72□□□□□ -0.85
CDH3-202ENST00000429102 MAP1LC3AQ9H492 121 aa9.72□□□□□ -0.85
CDH3-202ENST00000429102 MYO9AB2RTY4 2548 aa9.72□□□□□ -0.85
CDH3-202ENST00000429102 TNFRSF13BO14836 293 aaPredicted RBP9.72□□□□□ -0.85
CDH3-202ENST00000429102 FXYD2P54710 66 aa9.72□□□□□ -0.85
CDH3-202ENST00000429102 JKAMPQ9P055 326 aa9.72□□□□□ -0.85
CDH3-202ENST00000429102 RPL7P18124 248 aaKnown RBP9.71□□□□□ -0.85
CDH3-202ENST00000429102 SPANXN1Q5VSR9 72 aa9.71□□□□□ -0.85
CDH3-202ENST00000429102 UBTD1Q9HAC8 227 aa9.71□□□□□ -0.85
CDH3-202ENST00000429102 TMEM14CQ9P0S9 112 aa9.71□□□□□ -0.85
CDH3-202ENST00000429102 USP9XQ93008 2570 aaPredicted RBP9.71□□□□□ -0.85
CDH3-202ENST00000429102 SAMD5Q5TGI4 173 aa9.71□□□□□ -0.85
CDH3-202ENST00000429102 PVRIGQ6DKI7 326 aa9.71□□□□□ -0.85
CDH3-202ENST00000429102 ACACBO00763 2458 aa9.71□□□□□ -0.86
CDH3-202ENST00000429102 CFHR4Q92496 578 aa9.71□□□□□ -0.86
CDH3-202ENST00000429102 SMIM12Q96EX1 92 aa9.71□□□□□ -0.86
CDH3-202ENST00000429102 TIMD4Q96H15 378 aa9.71□□□□□ -0.86
CDH3-202ENST00000429102 HIST1H4GQ99525 98 aa9.71□□□□□ -0.86
CDH3-202ENST00000429102 KAAG1Q9UBP8 84 aa9.71□□□□□ -0.86
CDH3-202ENST00000429102 TNFRSF6BO95407 300 aa9.7□□□□□ -0.86
CDH3-202ENST00000429102 IGF1P05019 195 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms