RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 HBG2P69892 147 aa11.34□□□□□ -0.59
VARS-216ENST00000428445 CD300CQ08708 224 aa11.34□□□□□ -0.59
VARS-216ENST00000428445 C11orf72Q8NBR9 251 aa11.34□□□□□ -0.59
VARS-216ENST00000428445 ZNF680Q8NEM1 530 aa11.34□□□□□ -0.59
VARS-216ENST00000428445 C11orf1Q9H5F2 150 aa11.34□□□□□ -0.59
VARS-216ENST00000428445 LSM5Q9Y4Y9 91 aaKnown RBP11.34□□□□□ -0.59
VARS-216ENST00000428445 TRBV19A0A075B6N1 114 aa11.33□□□□□ -0.6
VARS-216ENST00000428445 TRGV2A0A075B6R0 118 aa11.33□□□□□ -0.6
VARS-216ENST00000428445 TRGV1A0A0A0MS02 117 aa11.33□□□□□ -0.6
VARS-216ENST00000428445 C5orf51A6NDU8 294 aa11.33□□□□□ -0.6
VARS-216ENST00000428445 MPDU1O75352 247 aa11.33□□□□□ -0.6
VARS-216ENST00000428445 CST7O76096 145 aa11.33□□□□□ -0.6
VARS-216ENST00000428445 IGHV3-53P01767 116 aa11.33□□□□□ -0.6
VARS-216ENST00000428445 HIST1H1EP10412 219 aaKnown RBP11.33□□□□□ -0.6
VARS-216ENST00000428445 BTN1A1Q13410 526 aa11.33□□□□□ -0.6
VARS-216ENST00000428445 LYRM2Q9NU23 88 aaPredicted RBP11.33□□□□□ -0.6
VARS-216ENST00000428445 SLC39A9Q9NUM3 307 aa11.33□□□□□ -0.6
VARS-216ENST00000428445 TP53TG3Q9ULZ0 132 aa11.33□□□□□ -0.6
VARS-216ENST00000428445 FAM24AA6NFZ4 105 aa11.32□□□□□ -0.6
VARS-216ENST00000428445 FAM25EA8MYX2 175 aa11.32□□□□□ -0.6
VARS-216ENST00000428445 EPM2AB3EWF7 344 aa11.32□□□□□ -0.6
VARS-216ENST00000428445 ZNF324O75467 553 aaPredicted RBP11.32□□□□□ -0.6
VARS-216ENST00000428445 RNASE4P34096 147 aaKnown RBP11.32□□□□□ -0.6
VARS-216ENST00000428445 IL15RAQ13261 267 aa11.32□□□□□ -0.6
VARS-216ENST00000428445 ANXA2RQ3ZCQ2 193 aa11.32□□□□□ -0.6
VARS-216ENST00000428445 STX12Q86Y82 276 aa11.32□□□□□ -0.6
VARS-216ENST00000428445 NDUFA13Q9P0J0 144 aa11.32□□□□□ -0.6
VARS-216ENST00000428445 FUT9Q9Y231 359 aa11.32□□□□□ -0.6
VARS-216ENST00000428445 C7orf71A4D174 169 aa11.31□□□□□ -0.6
VARS-216ENST00000428445 KLLNB2CW77 178 aa11.31□□□□□ -0.6
VARS-216ENST00000428445 SIVA1O15304 175 aa11.31□□□□□ -0.6
VARS-216ENST00000428445 XGP55808 180 aa11.31□□□□□ -0.6
VARS-216ENST00000428445 TMEM252Q8N6L7 170 aa11.31□□□□□ -0.6
VARS-216ENST00000428445 FAM19A4Q96LR4 140 aa11.31□□□□□ -0.6
VARS-216ENST00000428445 AGPAT4-IT1Q9H0P7 198 aa11.31□□□□□ -0.6
VARS-216ENST00000428445 NXPH4O95158 308 aa11.3□□□□□ -0.6
VARS-216ENST00000428445 NDUFB4O95168 129 aa11.3□□□□□ -0.6
VARS-216ENST00000428445 DNAH10OSP0CZ25 163 aa11.3□□□□□ -0.6
VARS-216ENST00000428445 BAXQ07812 192 aa11.3□□□□□ -0.6
VARS-216ENST00000428445 SLAQ13239 276 aa11.3□□□□□ -0.6
VARS-216ENST00000428445 EXOC3-AS1Q8N2X6 119 aa11.3□□□□□ -0.6
VARS-216ENST00000428445 EIF4E3Q8N5X7 224 aaKnown RBP11.3□□□□□ -0.6
VARS-216ENST00000428445 TIMM9Q9Y5J7 89 aa11.3□□□□□ -0.6
VARS-216ENST00000428445 PAX4O43316 350 aa11.29□□□□□ -0.6
VARS-216ENST00000428445 PYYP10082 97 aa11.29□□□□□ -0.6
VARS-216ENST00000428445 CRISP2P16562 243 aa11.29□□□□□ -0.6
VARS-216ENST00000428445 IBA57Q5T440 356 aaKnown RBP11.29□□□□□ -0.6
VARS-216ENST00000428445 PRR9Q5T870 116 aa11.29□□□□□ -0.6
VARS-216ENST00000428445 C9orf47Q6ZRZ4 202 aa11.29□□□□□ -0.6
VARS-216ENST00000428445 BLNKQ8WV28 456 aa11.29□□□□□ -0.6
VARS-216ENST00000428445 AAMDCQ9H7C9 122 aa11.29□□□□□ -0.6
VARS-216ENST00000428445 NUDT15Q9NV35 164 aa11.29□□□□□ -0.6
VARS-216ENST00000428445 MRPL16Q9NX20 251 aaKnown RBP11.29□□□□□ -0.6
VARS-216ENST00000428445 VPS13BQ7Z7G8 4022 aa11.28□□□□□ -0.6
VARS-216ENST00000428445 TRAV6A0A075B6T7 132 aa11.28□□□□□ -0.6
VARS-216ENST00000428445 TRBV7-9A0A0J9YWB2 115 aa11.28□□□□□ -0.6
VARS-216ENST00000428445 SPINK4O60575 86 aa11.28□□□□□ -0.6
VARS-216ENST00000428445 H2AFB2P0C5Z0 115 aa11.28□□□□□ -0.6
VARS-216ENST00000428445 INAFM2P0DMQ5 153 aa11.28□□□□□ -0.6
VARS-216ENST00000428445 LINC00299Q6ZSB3 139 aa11.28□□□□□ -0.6
VARS-216ENST00000428445 LYPD1Q8N2G4 141 aa11.28□□□□□ -0.6
VARS-216ENST00000428445 CCDC32Q9BV29 185 aa11.28□□□□□ -0.6
VARS-216ENST00000428445 IGKV2-40A0A087WW87 121 aaPredicted RBP11.27□□□□□ -0.61
VARS-216ENST00000428445 UBE2L5PA0A1B0GUS4 154 aa11.27□□□□□ -0.61
VARS-216ENST00000428445 PRAF2O60831 178 aa11.27□□□□□ -0.61
VARS-216ENST00000428445 IGKV2D-40P01614 121 aaPredicted RBP11.27□□□□□ -0.61
VARS-216ENST00000428445 GPX1P07203 203 aa11.27□□□□□ -0.61
VARS-216ENST00000428445 FGF7P21781 194 aa11.27□□□□□ -0.61
VARS-216ENST00000428445 KRTAP10-1P60331 282 aa11.27□□□□□ -0.61
VARS-216ENST00000428445 RAB32Q13637 225 aa11.27□□□□□ -0.61
VARS-216ENST00000428445 GCSAMLQ5JQS6 135 aa11.27□□□□□ -0.61
VARS-216ENST00000428445 LYPD5Q6UWN5 251 aa11.27□□□□□ -0.61
VARS-216ENST00000428445 C8orf49Q96NF6 230 aa11.27□□□□□ -0.61
VARS-216ENST00000428445 VGLL1Q99990 258 aa11.27□□□□□ -0.61
VARS-216ENST00000428445 SEC22CQ9BRL7 303 aa11.27□□□□□ -0.61
VARS-216ENST00000428445 PGPEP1Q9NXJ5 209 aa11.27□□□□□ -0.61
VARS-216ENST00000428445 IGSF23A1L1A6 192 aa11.26□□□□□ -0.61
VARS-216ENST00000428445 TCL1AP56279 114 aa11.26□□□□□ -0.61
VARS-216ENST00000428445 S100A10P60903 97 aa11.26□□□□□ -0.61
VARS-216ENST00000428445 TMEM78Q5T7P6 136 aa11.26□□□□□ -0.61
VARS-216ENST00000428445 ICOSQ9Y6W8 199 aa11.26□□□□□ -0.61
VARS-216ENST00000428445 FAM240BA0A1B0GVZ2 78 aa11.25□□□□□ -0.61
VARS-216ENST00000428445 SMR3BP02814 79 aaPredicted RBP11.25□□□□□ -0.61
VARS-216ENST00000428445 NBEAP1P0C6P0 100 aa11.25□□□□□ -0.61
VARS-216ENST00000428445 CRYBA4P53673 196 aa11.25□□□□□ -0.61
VARS-216ENST00000428445 HAMPP81172 84 aa11.25□□□□□ -0.61
VARS-216ENST00000428445 FHL2Q14192 279 aa11.25□□□□□ -0.61
VARS-216ENST00000428445 ICAM4Q14773 271 aa11.25□□□□□ -0.61
VARS-216ENST00000428445 FAM122CQ6P4D5 195 aa11.25□□□□□ -0.61
VARS-216ENST00000428445 ZFAND2AQ8N6M9 145 aa11.25□□□□□ -0.61
VARS-216ENST00000428445 ST6GAL2Q96JF0 529 aa11.25□□□□□ -0.61
VARS-216ENST00000428445 NPCDR1Q9BY65 106 aa11.25□□□□□ -0.61
VARS-216ENST00000428445 SLC25A31Q9H0C2 315 aa11.25□□□□□ -0.61
VARS-216ENST00000428445 GPN1Q9HCN4 374 aaPredicted RBP11.25□□□□□ -0.61
VARS-216ENST00000428445 E5RGE8 158 aa11.24□□□□□ -0.61
VARS-216ENST00000428445 K7EP13 123 aa11.24□□□□□ -0.61
VARS-216ENST00000428445 ERVFC1-1P60608 527 aa11.24□□□□□ -0.61
VARS-216ENST00000428445 Q5VSD8 79 aa11.24□□□□□ -0.61
VARS-216ENST00000428445 MZT2BQ6NZ67 158 aa11.24□□□□□ -0.61
VARS-216ENST00000428445 OR51M1Q9H341 326 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms