RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 K7EIL1 84 aa11.38□□□□□ -0.59
COL11A1-204ENST00000427239 CNN1P51911 297 aaKnown RBP11.38□□□□□ -0.59
COL11A1-204ENST00000427239 NUTF2P61970 127 aaKnown RBP11.38□□□□□ -0.59
COL11A1-204ENST00000427239 HIST1H1AQ02539 215 aaPredicted RBP11.38□□□□□ -0.59
COL11A1-204ENST00000427239 HAGHQ16775 308 aa11.38□□□□□ -0.59
COL11A1-204ENST00000427239 C9orf47Q6ZRZ4 202 aa11.38□□□□□ -0.59
COL11A1-204ENST00000427239 TRPT1Q86TN4 253 aaKnown RBP11.38□□□□□ -0.59
COL11A1-204ENST00000427239 OR4B1Q8NGF8 309 aa11.38□□□□□ -0.59
COL11A1-204ENST00000427239 LINC00477Q96M19 166 aa11.38□□□□□ -0.59
COL11A1-204ENST00000427239 ATG101Q9BSB4 218 aa11.38□□□□□ -0.59
COL11A1-204ENST00000427239 PDE6DO43924 150 aa11.37□□□□□ -0.59
COL11A1-204ENST00000427239 SNAPINO95295 136 aa11.37□□□□□ -0.59
COL11A1-204ENST00000427239 ZNF705DP0CH99 300 aaPredicted RBP11.37□□□□□ -0.59
COL11A1-204ENST00000427239 ZNF705BP0CI00 300 aaPredicted RBP11.37□□□□□ -0.59
COL11A1-204ENST00000427239 ATP5G3P48201 142 aa11.37□□□□□ -0.59
COL11A1-204ENST00000427239 C10orf91Q5T1B1 145 aa11.37□□□□□ -0.59
COL11A1-204ENST00000427239 CYB561D1Q8N8Q1 229 aa11.37□□□□□ -0.59
COL11A1-204ENST00000427239 LOC102724200A0A096LPH7 203 aaPredicted RBP11.36□□□□□ -0.59
COL11A1-204ENST00000427239 FBLL1A6NHQ2 334 aaKnown RBP11.36□□□□□ -0.59
COL11A1-204ENST00000427239 A8MTW9 85 aa11.36□□□□□ -0.59
COL11A1-204ENST00000427239 NPIPB6E9PJ23 425 aa11.36□□□□□ -0.59
COL11A1-204ENST00000427239 DEFB121Q5J5C9 76 aa11.36□□□□□ -0.59
COL11A1-204ENST00000427239 TMEM78Q5T7P6 136 aa11.36□□□□□ -0.59
COL11A1-204ENST00000427239 GOLT1AQ6ZVE7 132 aa11.36□□□□□ -0.59
COL11A1-204ENST00000427239 EIF5A2Q9GZV4 153 aaKnown RBP11.36□□□□□ -0.59
COL11A1-204ENST00000427239 RPH3ALQ9UNE2 315 aa11.36□□□□□ -0.59
COL11A1-204ENST00000427239 IGKV2-40A0A087WW87 121 aaPredicted RBP11.35□□□□□ -0.59
COL11A1-204ENST00000427239 LOC102723971A0A1B0GUV8 181 aa11.35□□□□□ -0.59
COL11A1-204ENST00000427239 PEX7O00628 323 aa11.35□□□□□ -0.59
COL11A1-204ENST00000427239 IGKV2D-40P01614 121 aaPredicted RBP11.35□□□□□ -0.59
COL11A1-204ENST00000427239 GNG5P63218 68 aa11.35□□□□□ -0.59
COL11A1-204ENST00000427239 MORN3Q6PF18 240 aaPredicted RBP11.35□□□□□ -0.59
COL11A1-204ENST00000427239 LINC00322Q6ZN03 302 aaPredicted RBP11.35□□□□□ -0.59
COL11A1-204ENST00000427239 LINC00469Q8N7U9 141 aa11.35□□□□□ -0.59
COL11A1-204ENST00000427239 RARRES2Q99969 163 aa11.35□□□□□ -0.59
COL11A1-204ENST00000427239 AGPAT4-IT1Q9H0P7 198 aa11.35□□□□□ -0.59
COL11A1-204ENST00000427239 PPP1R14DQ9NXH3 145 aa11.35□□□□□ -0.59
COL11A1-204ENST00000427239 KIR2DL5BA0A0G2JN68 375 aa11.35□□□□□ -0.59
COL11A1-204ENST00000427239 KIR2DL5BA0A0G2JPC4 375 aa11.35□□□□□ -0.59
COL11A1-204ENST00000427239 RBMY1BA6NDE4 496 aaKnown RBP11.35□□□□□ -0.59
COL11A1-204ENST00000427239 RBMY1EA6NEQ0 496 aaKnown RBP11.35□□□□□ -0.59
COL11A1-204ENST00000427239 RBMY1DP0C7P1 496 aaKnown RBP11.35□□□□□ -0.59
COL11A1-204ENST00000427239 DEFA6Q01524 100 aa11.35□□□□□ -0.59
COL11A1-204ENST00000427239 ZNF506Q5JVG8 444 aa11.35□□□□□ -0.59
COL11A1-204ENST00000427239 KIR2DL5AQ8N109 375 aa11.35□□□□□ -0.59
COL11A1-204ENST00000427239 KIR2DL5BQ8NHK3 375 aa11.35□□□□□ -0.59
COL11A1-204ENST00000427239 VGLL1Q99990 258 aa11.35□□□□□ -0.59
COL11A1-204ENST00000427239 NDUFS6O75380 124 aaKnown RBP11.34□□□□□ -0.59
COL11A1-204ENST00000427239 IGKV3-20P01619 116 aa11.34□□□□□ -0.59
COL11A1-204ENST00000427239 S100A8P05109 93 aa11.34□□□□□ -0.59
COL11A1-204ENST00000427239 SMIM6P0DI80 62 aa11.34□□□□□ -0.59
COL11A1-204ENST00000427239 PRB4P10163 310 aaPredicted RBP11.34□□□□□ -0.59
COL11A1-204ENST00000427239 APOC4P55056 127 aa11.34□□□□□ -0.59
COL11A1-204ENST00000427239 ERCC8Q13216 396 aa11.34□□□□□ -0.59
COL11A1-204ENST00000427239 ODF3Q96PU9 254 aa11.34□□□□□ -0.59
COL11A1-204ENST00000427239 CSTL1Q9H114 145 aa11.34□□□□□ -0.59
COL11A1-204ENST00000427239 SMDT1Q9H4I9 107 aa11.34□□□□□ -0.59
COL11A1-204ENST00000427239 KLF12Q9Y4X4 402 aa11.34□□□□□ -0.59
COL11A1-204ENST00000427239 TRBV7-9A0A0J9YWB2 115 aa11.33□□□□□ -0.6
COL11A1-204ENST00000427239 S100A9P06702 114 aaKnown RBP11.33□□□□□ -0.6
COL11A1-204ENST00000427239 FRMD6-AS1P0C7T7 363 aa11.33□□□□□ -0.6
COL11A1-204ENST00000427239 RPL35AP18077 110 aaKnown RBP11.33□□□□□ -0.6
COL11A1-204ENST00000427239 ZNF138P52744 262 aa11.33□□□□□ -0.6
COL11A1-204ENST00000427239 TMEM75Q8N9X5 138 aa11.33□□□□□ -0.6
COL11A1-204ENST00000427239 SEC11CQ9BY50 192 aa11.33□□□□□ -0.6
COL11A1-204ENST00000427239 ZNF492Q9P255 531 aa11.33□□□□□ -0.6
COL11A1-204ENST00000427239 LENEPQ9Y5L5 61 aa11.33□□□□□ -0.6
COL11A1-204ENST00000427239 CT45A10P0DMU9 189 aa11.32□□□□□ -0.6
COL11A1-204ENST00000427239 TSPOP30536 169 aa11.32□□□□□ -0.6
COL11A1-204ENST00000427239 TMEM88Q6PEY1 159 aa11.32□□□□□ -0.6
COL11A1-204ENST00000427239 AMTNQ6UX39 209 aa11.32□□□□□ -0.6
COL11A1-204ENST00000427239 MRAPQ8TCY5 172 aa11.32□□□□□ -0.6
COL11A1-204ENST00000427239 C11orf52Q96A22 123 aa11.32□□□□□ -0.6
COL11A1-204ENST00000427239 C1QTNF4Q9BXJ3 329 aa11.32□□□□□ -0.6
COL11A1-204ENST00000427239 TMEM250H0YL14 139 aa11.32□□□□□ -0.6
COL11A1-204ENST00000427239 UBE2CO00762 179 aa11.32□□□□□ -0.6
COL11A1-204ENST00000427239 AMBPP02760 352 aa11.32□□□□□ -0.6
COL11A1-204ENST00000427239 ADCYAP1P18509 176 aa11.32□□□□□ -0.6
COL11A1-204ENST00000427239 RAB5BP61020 215 aa11.32□□□□□ -0.6
COL11A1-204ENST00000427239 CBLN2Q8IUK8 224 aa11.32□□□□□ -0.6
COL11A1-204ENST00000427239 C2CD4CQ8TF44 421 aa11.32□□□□□ -0.6
COL11A1-204ENST00000427239 FMC1Q96HJ9 113 aa11.32□□□□□ -0.6
COL11A1-204ENST00000427239 LINC00479Q96M42 142 aa11.32□□□□□ -0.6
COL11A1-204ENST00000427239 AGRNO00468 2067 aa11.31□□□□□ -0.6
COL11A1-204ENST00000427239 TRAV8-1A0A0A6YYK1 113 aa11.31□□□□□ -0.6
COL11A1-204ENST00000427239 SCO2A0A1W2PP80 73 aa11.31□□□□□ -0.6
COL11A1-204ENST00000427239 IGLV2-11P01706 119 aa11.31□□□□□ -0.6
COL11A1-204ENST00000427239 UBE2G1P62253 170 aa11.31□□□□□ -0.6
COL11A1-204ENST00000427239 PEA15Q15121 130 aa11.31□□□□□ -0.6
COL11A1-204ENST00000427239 FAM19A4Q96LR4 140 aa11.31□□□□□ -0.6
COL11A1-204ENST00000427239 PSG8Q9UQ74 426 aa11.31□□□□□ -0.6
COL11A1-204ENST00000427239 LEPP41159 167 aa11.3□□□□□ -0.6
COL11A1-204ENST00000427239 AKR1C3P42330 323 aa11.3□□□□□ -0.6
COL11A1-204ENST00000427239 CDKN1BP46527 198 aa11.3□□□□□ -0.6
COL11A1-204ENST00000427239 TMEM183BQ1AE95 376 aa11.3□□□□□ -0.6
COL11A1-204ENST00000427239 SAPCD1Q5SSQ6 148 aa11.3□□□□□ -0.6
COL11A1-204ENST00000427239 SLC35B3Q9H1N7 401 aa11.3□□□□□ -0.6
COL11A1-204ENST00000427239 NBEAL2Q6ZNJ1 2754 aa11.3□□□□□ -0.6
COL11A1-204ENST00000427239 TRAV34A0A0B4J273 112 aa11.29□□□□□ -0.6
COL11A1-204ENST00000427239 TRBV6-1A0A0K0K1D8 114 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms