RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 TRBV19A0A075B6N1 114 aa6.92□□□□□ -1.3
GACAT3-201ENST00000426539 TRAV6A0A075B6T7 132 aa6.92□□□□□ -1.3
GACAT3-201ENST00000426539 A0A096LPF7 62 aa6.92□□□□□ -1.3
GACAT3-201ENST00000426539 UBE2L5PA0A1B0GUS4 154 aa6.92□□□□□ -1.3
GACAT3-201ENST00000426539 C5orf51A6NDU8 294 aa6.92□□□□□ -1.3
GACAT3-201ENST00000426539 SNURFLB1AK76 121 aa6.92□□□□□ -1.3
GACAT3-201ENST00000426539 KLLNB2CW77 178 aa6.92□□□□□ -1.3
GACAT3-201ENST00000426539 H3BNG1 76 aa6.92□□□□□ -1.3
GACAT3-201ENST00000426539 ZNF324O75467 553 aaPredicted RBP6.92□□□□□ -1.3
GACAT3-201ENST00000426539 RPL29P47914 159 aaKnown RBP6.92□□□□□ -1.3
GACAT3-201ENST00000426539 CD300CQ08708 224 aa6.92□□□□□ -1.3
GACAT3-201ENST00000426539 BTN1A1Q13410 526 aa6.92□□□□□ -1.3
GACAT3-201ENST00000426539 ZNF846Q147U1 533 aa6.92□□□□□ -1.3
GACAT3-201ENST00000426539 TMEM252Q8N6L7 170 aa6.92□□□□□ -1.3
GACAT3-201ENST00000426539 MAPKAPK5-AS1Q8N8E1 139 aa6.92□□□□□ -1.3
GACAT3-201ENST00000426539 OR1L4Q8NGR5 311 aa6.92□□□□□ -1.3
GACAT3-201ENST00000426539 CHAC2Q8WUX2 184 aa6.92□□□□□ -1.3
GACAT3-201ENST00000426539 MRPL53Q96EL3 112 aaKnown RBP6.92□□□□□ -1.3
GACAT3-201ENST00000426539 C2orf50Q96LR7 162 aa6.92□□□□□ -1.3
GACAT3-201ENST00000426539 GSN-AS1Q9NRJ2 163 aa6.92□□□□□ -1.3
GACAT3-201ENST00000426539 NDUFA13Q9P0J0 144 aa6.92□□□□□ -1.3
GACAT3-201ENST00000426539 TMEM14CQ9P0S9 112 aa6.92□□□□□ -1.3
GACAT3-201ENST00000426539 C7orf71A4D174 169 aa6.91□□□□□ -1.3
GACAT3-201ENST00000426539 SLC25A5P05141 298 aaKnown RBP6.91□□□□□ -1.3
GACAT3-201ENST00000426539 PYYP10082 97 aa6.91□□□□□ -1.3
GACAT3-201ENST00000426539 SULT1A1P50225 295 aa6.91□□□□□ -1.3
GACAT3-201ENST00000426539 RAB31Q13636 194 aa6.91□□□□□ -1.3
GACAT3-201ENST00000426539 RAB32Q13637 225 aa6.91□□□□□ -1.3
GACAT3-201ENST00000426539 TTC32Q5I0X7 151 aa6.91□□□□□ -1.3
GACAT3-201ENST00000426539 GCSAMLQ5JQS6 135 aa6.91□□□□□ -1.3
GACAT3-201ENST00000426539 PRR9Q5T870 116 aa6.91□□□□□ -1.3
GACAT3-201ENST00000426539 Q6ZQT7 251 aa6.91□□□□□ -1.3
GACAT3-201ENST00000426539 C12orf45Q8N5I9 185 aaPredicted RBP6.91□□□□□ -1.3
GACAT3-201ENST00000426539 C18orf15Q96N68 181 aa6.91□□□□□ -1.3
GACAT3-201ENST00000426539 PFDN5Q99471 154 aa6.91□□□□□ -1.3
GACAT3-201ENST00000426539 LINC00467Q9BRT7 94 aa6.91□□□□□ -1.3
GACAT3-201ENST00000426539 AGPAT4-IT1Q9H0P7 198 aa6.91□□□□□ -1.3
GACAT3-201ENST00000426539 LYRM2Q9NU23 88 aaPredicted RBP6.91□□□□□ -1.3
GACAT3-201ENST00000426539 NUDT15Q9NV35 164 aa6.91□□□□□ -1.3
GACAT3-201ENST00000426539 KLF12Q9Y4X4 402 aa6.91□□□□□ -1.3
GACAT3-201ENST00000426539 DNAH5Q8TE73 4624 aa6.9□□□□□ -1.3
GACAT3-201ENST00000426539 A0A1W2PPQ1 181 aa6.9□□□□□ -1.3
GACAT3-201ENST00000426539 HIST1H1EP10412 219 aaKnown RBP6.9□□□□□ -1.3
GACAT3-201ENST00000426539 CRISP2P16562 243 aa6.9□□□□□ -1.3
GACAT3-201ENST00000426539 BTF3P20290 206 aaKnown RBP6.9□□□□□ -1.3
GACAT3-201ENST00000426539 FGF7P21781 194 aa6.9□□□□□ -1.3
GACAT3-201ENST00000426539 S100A11P31949 105 aa6.9□□□□□ -1.3
GACAT3-201ENST00000426539 S100A10P60903 97 aa6.9□□□□□ -1.3
GACAT3-201ENST00000426539 BAXQ07812 192 aa6.9□□□□□ -1.3
GACAT3-201ENST00000426539 ANXA2RQ3ZCQ2 193 aa6.9□□□□□ -1.3
GACAT3-201ENST00000426539 Q6ZRN7 208 aaPredicted RBP6.9□□□□□ -1.3
GACAT3-201ENST00000426539 EXOC3-AS1Q8N2X6 119 aa6.9□□□□□ -1.3
GACAT3-201ENST00000426539 ZFAND2AQ8N6M9 145 aa6.9□□□□□ -1.3
GACAT3-201ENST00000426539 FAM167A-AS1Q96KT0 104 aa6.9□□□□□ -1.3
GACAT3-201ENST00000426539 SLC25A2Q9BXI2 301 aa6.9□□□□□ -1.3
GACAT3-201ENST00000426539 TP53TG3Q9ULZ0 132 aa6.9□□□□□ -1.3
GACAT3-201ENST00000426539 IGKV2-40A0A087WW87 121 aaPredicted RBP6.89□□□□□ -1.31
GACAT3-201ENST00000426539 TRGV1A0A0A0MS02 117 aa6.89□□□□□ -1.31
GACAT3-201ENST00000426539 RGS13O14921 159 aa6.89□□□□□ -1.31
GACAT3-201ENST00000426539 SPINK4O60575 86 aa6.89□□□□□ -1.31
GACAT3-201ENST00000426539 IGKV2D-40P01614 121 aaPredicted RBP6.89□□□□□ -1.31
GACAT3-201ENST00000426539 PVALBP20472 110 aaPredicted RBP6.89□□□□□ -1.31
GACAT3-201ENST00000426539 RNASE4P34096 147 aaKnown RBP6.89□□□□□ -1.31
GACAT3-201ENST00000426539 TCL1AP56279 114 aa6.89□□□□□ -1.31
GACAT3-201ENST00000426539 C9orf47Q6ZRZ4 202 aa6.89□□□□□ -1.31
GACAT3-201ENST00000426539 Q8N1X5 172 aa6.89□□□□□ -1.31
GACAT3-201ENST00000426539 ZNF680Q8NEM1 530 aa6.89□□□□□ -1.31
GACAT3-201ENST00000426539 BLNKQ8WV28 456 aa6.89□□□□□ -1.31
GACAT3-201ENST00000426539 LINC00477Q96M19 166 aa6.89□□□□□ -1.31
GACAT3-201ENST00000426539 VGLL1Q99990 258 aa6.89□□□□□ -1.31
GACAT3-201ENST00000426539 FUT9Q9Y231 359 aa6.89□□□□□ -1.31
GACAT3-201ENST00000426539 PRELID1Q9Y255 219 aa6.89□□□□□ -1.31
GACAT3-201ENST00000426539 TRGV2A0A075B6R0 118 aa6.88□□□□□ -1.31
GACAT3-201ENST00000426539 LINC00315P59091 139 aa6.88□□□□□ -1.31
GACAT3-201ENST00000426539 NHLH2Q02577 135 aa6.88□□□□□ -1.31
GACAT3-201ENST00000426539 PDE6HQ13956 83 aa6.88□□□□□ -1.31
GACAT3-201ENST00000426539 ICAM4Q14773 271 aa6.88□□□□□ -1.31
GACAT3-201ENST00000426539 ATP6V1FQ16864 119 aa6.88□□□□□ -1.31
GACAT3-201ENST00000426539 MIR17HGQ75NE6 70 aa6.88□□□□□ -1.31
GACAT3-201ENST00000426539 EIF4E3Q8N5X7 224 aaKnown RBP6.88□□□□□ -1.31
GACAT3-201ENST00000426539 THAP6Q8TBB0 222 aa6.88□□□□□ -1.31
GACAT3-201ENST00000426539 NPCDR1Q9BY65 106 aa6.88□□□□□ -1.31
GACAT3-201ENST00000426539 GPN1Q9HCN4 374 aaPredicted RBP6.88□□□□□ -1.31
GACAT3-201ENST00000426539 TIMM9Q9Y5J7 89 aa6.88□□□□□ -1.31
GACAT3-201ENST00000426539 MPDU1O75352 247 aa6.87□□□□□ -1.31
GACAT3-201ENST00000426539 IGHV3-53P01767 116 aa6.87□□□□□ -1.31
GACAT3-201ENST00000426539 HBG1P69891 147 aa6.87□□□□□ -1.31
GACAT3-201ENST00000426539 HBG2P69892 147 aa6.87□□□□□ -1.31
GACAT3-201ENST00000426539 IBA57Q5T440 356 aaKnown RBP6.87□□□□□ -1.31
GACAT3-201ENST00000426539 FAM122CQ6P4D5 195 aa6.87□□□□□ -1.31
GACAT3-201ENST00000426539 STX12Q86Y82 276 aa6.87□□□□□ -1.31
GACAT3-201ENST00000426539 ST6GAL2Q96JF0 529 aa6.87□□□□□ -1.31
GACAT3-201ENST00000426539 SCRT2Q9NQ03 307 aa6.87□□□□□ -1.31
GACAT3-201ENST00000426539 MRPL16Q9NX20 251 aaKnown RBP6.87□□□□□ -1.31
GACAT3-201ENST00000426539 ZNF492Q9P255 531 aa6.87□□□□□ -1.31
GACAT3-201ENST00000426539 H0YIZ8 118 aa6.86□□□□□ -1.31
GACAT3-201ENST00000426539 GPX1P07203 203 aa6.86□□□□□ -1.31
GACAT3-201ENST00000426539 NMBP08949 121 aa6.86□□□□□ -1.31
GACAT3-201ENST00000426539 FUSP35637 526 aaKnown RBP eCLIP6.86□□□□□ -1.31
GACAT3-201ENST00000426539 Q8TAT8 98 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms