RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 Q5BKY6 102 aa13.09□□□□□ -0.31
MSH5-207ENST00000425703 TMEM78Q5T7P6 136 aa13.09□□□□□ -0.31
MSH5-207ENST00000425703 FAM122CQ6P4D5 195 aa13.09□□□□□ -0.31
MSH5-207ENST00000425703 PQLC2Q6ZP29 291 aa13.09□□□□□ -0.31
MSH5-207ENST00000425703 INO80EQ8NBZ0 244 aaPredicted RBP13.09□□□□□ -0.31
MSH5-207ENST00000425703 PSMG3Q9BT73 122 aaPredicted RBP13.09□□□□□ -0.31
MSH5-207ENST00000425703 TRAV12-3A0A0B4J271 114 aa13.08□□□□□ -0.32
MSH5-207ENST00000425703 A0A1W2PPV4 95 aa13.08□□□□□ -0.32
MSH5-207ENST00000425703 C7orf71A4D174 169 aa13.08□□□□□ -0.32
MSH5-207ENST00000425703 RBAKDNA6NC62 111 aa13.08□□□□□ -0.32
MSH5-207ENST00000425703 P0DMU3 169 aa13.08□□□□□ -0.32
MSH5-207ENST00000425703 FAM231AP0DMU4 169 aa13.08□□□□□ -0.32
MSH5-207ENST00000425703 FAM231CP0DMU5 169 aa13.08□□□□□ -0.32
MSH5-207ENST00000425703 CSN1S1P47710 185 aa13.08□□□□□ -0.32
MSH5-207ENST00000425703 RANP62826 216 aaKnown RBP13.08□□□□□ -0.32
MSH5-207ENST00000425703 LINC00467Q9BRT7 94 aa13.08□□□□□ -0.32
MSH5-207ENST00000425703 Q9H3A6 140 aa13.08□□□□□ -0.32
MSH5-207ENST00000425703 IGKV2-40A0A087WW87 121 aaPredicted RBP13.07□□□□□ -0.32
MSH5-207ENST00000425703 IGKV2D-40P01614 121 aaPredicted RBP13.07□□□□□ -0.32
MSH5-207ENST00000425703 DEFB130BP0DP73 79 aa13.07□□□□□ -0.32
MSH5-207ENST00000425703 DEFB130AP0DP74 79 aa13.07□□□□□ -0.32
MSH5-207ENST00000425703 RAB2AP61019 212 aa13.07□□□□□ -0.32
MSH5-207ENST00000425703 SERF2P84101 59 aa13.07□□□□□ -0.32
MSH5-207ENST00000425703 OR10G4Q8NGN3 311 aa13.07□□□□□ -0.32
MSH5-207ENST00000425703 OR10G9Q8NGN4 311 aa13.07□□□□□ -0.32
MSH5-207ENST00000425703 OR10G7Q8NGN6 311 aa13.07□□□□□ -0.32
MSH5-207ENST00000425703 OR2T35Q8NGX2 323 aa13.07□□□□□ -0.32
MSH5-207ENST00000425703 RXFP4Q8TDU9 374 aa13.07□□□□□ -0.32
MSH5-207ENST00000425703 ZNF492Q9P255 531 aa13.07□□□□□ -0.32
MSH5-207ENST00000425703 CBY3A6NI87 242 aa13.06□□□□□ -0.32
MSH5-207ENST00000425703 J3KRW8 73 aa13.06□□□□□ -0.32
MSH5-207ENST00000425703 MBP02144 154 aa13.06□□□□□ -0.32
MSH5-207ENST00000425703 HTN3P15516 51 aa13.06□□□□□ -0.32
MSH5-207ENST00000425703 ARL6IP6Q8N6S5 226 aa13.06□□□□□ -0.32
MSH5-207ENST00000425703 HSD17B11Q8NBQ5 300 aa13.06□□□□□ -0.32
MSH5-207ENST00000425703 VGLL1Q99990 258 aa13.06□□□□□ -0.32
MSH5-207ENST00000425703 TNFSF18Q9UNG2 199 aa13.06□□□□□ -0.32
MSH5-207ENST00000425703 VPS13DQ5THJ4 4388 aa13.06□□□□□ -0.32
MSH5-207ENST00000425703 RNF222A6NCQ9 220 aa13.05□□□□□ -0.32
MSH5-207ENST00000425703 ZNF324O75467 553 aaPredicted RBP13.05□□□□□ -0.32
MSH5-207ENST00000425703 GPX1P07203 203 aa13.05□□□□□ -0.32
MSH5-207ENST00000425703 ZNF138P52744 262 aa13.05□□□□□ -0.32
MSH5-207ENST00000425703 ZFAND2AQ8N6M9 145 aa13.05□□□□□ -0.32
MSH5-207ENST00000425703 NOP10Q9NPE3 64 aaKnown RBP13.05□□□□□ -0.32
MSH5-207ENST00000425703 OTORQ9NRC9 128 aa13.05□□□□□ -0.32
MSH5-207ENST00000425703 FXYD6-FXYD2A0A087WZ82 144 aa13.04□□□□□ -0.32
MSH5-207ENST00000425703 ATP5G1P05496 136 aa13.04□□□□□ -0.32
MSH5-207ENST00000425703 ATP6V0CP27449 155 aa13.04□□□□□ -0.32
MSH5-207ENST00000425703 ATP5G3P48201 142 aa13.04□□□□□ -0.32
MSH5-207ENST00000425703 FAM74A1Q5RGS3 127 aa13.04□□□□□ -0.32
MSH5-207ENST00000425703 LINC00612Q8N6U2 182 aa13.04□□□□□ -0.32
MSH5-207ENST00000425703 C15orf53Q8NAA6 179 aa13.04□□□□□ -0.32
MSH5-207ENST00000425703 ZNF680Q8NEM1 530 aa13.04□□□□□ -0.32
MSH5-207ENST00000425703 TMED6Q8WW62 240 aa13.04□□□□□ -0.32
MSH5-207ENST00000425703 GNPNAT1Q96EK6 184 aaPredicted RBP13.04□□□□□ -0.32
MSH5-207ENST00000425703 LENEPQ9Y5L5 61 aa13.04□□□□□ -0.32
MSH5-207ENST00000425703 EPPK1P58107 5090 aaKnown RBP13.04□□□□□ -0.32
MSH5-207ENST00000425703 SNURFLB1AK76 121 aa13.03□□□□□ -0.32
MSH5-207ENST00000425703 DIRC3C9JPN6 131 aa13.03□□□□□ -0.32
MSH5-207ENST00000425703 RNASE4P34096 147 aaKnown RBP13.03□□□□□ -0.32
MSH5-207ENST00000425703 CDC34P49427 236 aaPredicted RBP13.03□□□□□ -0.32
MSH5-207ENST00000425703 CD300CQ08708 224 aa13.03□□□□□ -0.32
MSH5-207ENST00000425703 DAZ2Q13117 558 aaKnown RBP13.03□□□□□ -0.32
MSH5-207ENST00000425703 ANXA2RQ3ZCQ2 193 aa13.03□□□□□ -0.32
MSH5-207ENST00000425703 TMEM88Q6PEY1 159 aa13.03□□□□□ -0.32
MSH5-207ENST00000425703 POM121L12Q8N7R1 296 aa13.03□□□□□ -0.32
MSH5-207ENST00000425703 BORCS7-ASMTA0A0B4J1R7 106 aa13.02□□□□□ -0.33
MSH5-207ENST00000425703 STAG3L2P0CL84 134 aa13.02□□□□□ -0.33
MSH5-207ENST00000425703 STAG3L3P0CL85 134 aa13.02□□□□□ -0.33
MSH5-207ENST00000425703 BTN1A1Q13410 526 aa13.02□□□□□ -0.33
MSH5-207ENST00000425703 EIF4E3Q8N5X7 224 aaKnown RBP13.02□□□□□ -0.33
MSH5-207ENST00000425703 CMTM2Q8TAZ6 248 aa13.02□□□□□ -0.33
MSH5-207ENST00000425703 G3V3Q6 166 aa13.01□□□□□ -0.33
MSH5-207ENST00000425703 EIF3GO75821 320 aaKnown RBP eCLIP13.01□□□□□ -0.33
MSH5-207ENST00000425703 SUN5Q8TC36 379 aa13.01□□□□□ -0.33
MSH5-207ENST00000425703 RAB24Q969Q5 203 aa13.01□□□□□ -0.33
MSH5-207ENST00000425703 PGPA6NDG6 321 aa13□□□□□ -0.33
MSH5-207ENST00000425703 F5H768 121 aa13□□□□□ -0.33
MSH5-207ENST00000425703 TAAR5O14804 337 aa13□□□□□ -0.33
MSH5-207ENST00000425703 ARL14EPLP0DKL9 152 aa13□□□□□ -0.33
MSH5-207ENST00000425703 RNF212Q495C1 297 aa13□□□□□ -0.33
MSH5-207ENST00000425703 RPL7L1Q6DKI1 246 aaKnown RBP13□□□□□ -0.33
MSH5-207ENST00000425703 Q8TAT8 98 aa13□□□□□ -0.33
MSH5-207ENST00000425703 HYLS1Q96M11 299 aa13□□□□□ -0.33
MSH5-207ENST00000425703 SH3BGRL3Q9H299 93 aa13□□□□□ -0.33
MSH5-207ENST00000425703 IBA57Q5T440 356 aaKnown RBP12.99□□□□□ -0.33
MSH5-207ENST00000425703 PRR9Q5T870 116 aa12.99□□□□□ -0.33
MSH5-207ENST00000425703 C11orf72Q8NBR9 251 aa12.99□□□□□ -0.33
MSH5-207ENST00000425703 ST6GAL2Q96JF0 529 aa12.99□□□□□ -0.33
MSH5-207ENST00000425703 C18orf15Q96N68 181 aa12.99□□□□□ -0.33
MSH5-207ENST00000425703 ACTR3CQ9C0K3 210 aaPredicted RBP12.99□□□□□ -0.33
MSH5-207ENST00000425703 DNAH6Q9C0G6 4158 aa12.98□□□□□ -0.33
MSH5-207ENST00000425703 IGHV1OR15-1A0A075B7D0 117 aa12.98□□□□□ -0.33
MSH5-207ENST00000425703 RGS13O14921 159 aa12.98□□□□□ -0.33
MSH5-207ENST00000425703 HMGB3O15347 200 aaKnown RBP12.98□□□□□ -0.33
MSH5-207ENST00000425703 TMEM167BQ9NRX6 74 aa12.98□□□□□ -0.33
MSH5-207ENST00000425703 SERTM2A0A1B0GWG4 89 aa12.97□□□□□ -0.33
MSH5-207ENST00000425703 CXorf1O96002 111 aa12.97□□□□□ -0.33
MSH5-207ENST00000425703 GCHFRP30047 84 aa12.97□□□□□ -0.33
MSH5-207ENST00000425703 FAM3BP58499 235 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms