RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 TXNDC17Q9BRA2 123 aa8.41□□□□□ -1.06
HLA-DQB3-203ENST00000425319 SRRQ9GZT4 340 aa8.41□□□□□ -1.06
HLA-DQB3-203ENST00000425319 GPN1Q9HCN4 374 aaPredicted RBP8.41□□□□□ -1.06
HLA-DQB3-203ENST00000425319 MSRB1Q9NZV6 116 aa8.41□□□□□ -1.06
HLA-DQB3-203ENST00000425319 A0A087WTM6 91 aa8.4□□□□□ -1.06
HLA-DQB3-203ENST00000425319 J3QL48 77 aa8.4□□□□□ -1.06
HLA-DQB3-203ENST00000425319 SLC17A3O00476 420 aa8.4□□□□□ -1.06
HLA-DQB3-203ENST00000425319 SPINK4O60575 86 aa8.4□□□□□ -1.06
HLA-DQB3-203ENST00000425319 PRAF2O60831 178 aa8.4□□□□□ -1.06
HLA-DQB3-203ENST00000425319 NDUFB6O95139 128 aa8.4□□□□□ -1.06
HLA-DQB3-203ENST00000425319 IGHV3-53P01767 116 aa8.4□□□□□ -1.06
HLA-DQB3-203ENST00000425319 S100A11P31949 105 aa8.4□□□□□ -1.06
HLA-DQB3-203ENST00000425319 CSN1S1P47710 185 aa8.4□□□□□ -1.06
HLA-DQB3-203ENST00000425319 HBG1P69891 147 aa8.4□□□□□ -1.06
HLA-DQB3-203ENST00000425319 HBG2P69892 147 aa8.4□□□□□ -1.06
HLA-DQB3-203ENST00000425319 ZNF415Q09FC8 603 aa8.4□□□□□ -1.06
HLA-DQB3-203ENST00000425319 PDE6HQ13956 83 aa8.4□□□□□ -1.06
HLA-DQB3-203ENST00000425319 TRIM63Q969Q1 353 aa8.4□□□□□ -1.06
HLA-DQB3-203ENST00000425319 MRPL32Q9BYC8 188 aaKnown RBP8.4□□□□□ -1.06
HLA-DQB3-203ENST00000425319 UQCC1Q9NVA1 299 aa8.4□□□□□ -1.06
HLA-DQB3-203ENST00000425319 DNAH11Q96DT5 4516 aa8.4□□□□□ -1.07
HLA-DQB3-203ENST00000425319 ABCA13Q86UQ4 5058 aa8.4□□□□□ -1.07
HLA-DQB3-203ENST00000425319 IGHV1OR15-1A0A075B7D0 117 aa8.39□□□□□ -1.07
HLA-DQB3-203ENST00000425319 C7orf66A4D0T2 115 aa8.39□□□□□ -1.07
HLA-DQB3-203ENST00000425319 H3BQ15 152 aa8.39□□□□□ -1.07
HLA-DQB3-203ENST00000425319 CCNKO75909 580 aa8.39□□□□□ -1.07
HLA-DQB3-203ENST00000425319 RPL29P47914 159 aaKnown RBP8.39□□□□□ -1.07
HLA-DQB3-203ENST00000425319 CRYBA4P53673 196 aa8.39□□□□□ -1.07
HLA-DQB3-203ENST00000425319 BAXQ07812 192 aa8.39□□□□□ -1.07
HLA-DQB3-203ENST00000425319 ATP6V1FQ16864 119 aa8.39□□□□□ -1.07
HLA-DQB3-203ENST00000425319 Q6ZRN7 208 aaPredicted RBP8.39□□□□□ -1.07
HLA-DQB3-203ENST00000425319 C8orf49Q96NF6 230 aa8.39□□□□□ -1.07
HLA-DQB3-203ENST00000425319 MGST2Q99735 147 aa8.39□□□□□ -1.07
HLA-DQB3-203ENST00000425319 VGLL1Q99990 258 aa8.39□□□□□ -1.07
HLA-DQB3-203ENST00000425319 KLF12Q9Y4X4 402 aa8.39□□□□□ -1.07
HLA-DQB3-203ENST00000425319 LSM5Q9Y4Y9 91 aaKnown RBP8.39□□□□□ -1.07
HLA-DQB3-203ENST00000425319 PKD1P98161 4303 aa8.38□□□□□ -1.07
HLA-DQB3-203ENST00000425319 TRBV19A0A075B6N1 114 aa8.38□□□□□ -1.07
HLA-DQB3-203ENST00000425319 TRAV5A0A0B4J249 113 aa8.38□□□□□ -1.07
HLA-DQB3-203ENST00000425319 C5orf51A6NDU8 294 aa8.38□□□□□ -1.07
HLA-DQB3-203ENST00000425319 FAM25EA8MYX2 175 aa8.38□□□□□ -1.07
HLA-DQB3-203ENST00000425319 E5RGE8 158 aa8.38□□□□□ -1.07
HLA-DQB3-203ENST00000425319 H3BMQ9 156 aa8.38□□□□□ -1.07
HLA-DQB3-203ENST00000425319 XGP55808 180 aa8.38□□□□□ -1.07
HLA-DQB3-203ENST00000425319 ERCC8Q13216 396 aa8.38□□□□□ -1.07
HLA-DQB3-203ENST00000425319 MIC13Q5XKP0 118 aa8.38□□□□□ -1.07
HLA-DQB3-203ENST00000425319 STX12Q86Y82 276 aa8.38□□□□□ -1.07
HLA-DQB3-203ENST00000425319 BLNKQ8WV28 456 aa8.38□□□□□ -1.07
HLA-DQB3-203ENST00000425319 SPXQ9BT56 116 aa8.38□□□□□ -1.07
HLA-DQB3-203ENST00000425319 SLC39A9Q9NUM3 307 aa8.38□□□□□ -1.07
HLA-DQB3-203ENST00000425319 TMEM14CQ9P0S9 112 aa8.38□□□□□ -1.07
HLA-DQB3-203ENST00000425319 RCL1Q9Y2P8 373 aaKnown RBP8.38□□□□□ -1.07
HLA-DQB3-203ENST00000425319 IGLV5-52A0A0A0MRZ9 124 aa8.37□□□□□ -1.07
HLA-DQB3-203ENST00000425319 KLLNB2CW77 178 aa8.37□□□□□ -1.07
HLA-DQB3-203ENST00000425319 C9JCJ5 164 aa8.37□□□□□ -1.07
HLA-DQB3-203ENST00000425319 MBPP02686 304 aaPredicted RBP8.37□□□□□ -1.07
HLA-DQB3-203ENST00000425319 BTN1A1Q13410 526 aa8.37□□□□□ -1.07
HLA-DQB3-203ENST00000425319 FAM159AQ6UWV7 190 aa8.37□□□□□ -1.07
HLA-DQB3-203ENST00000425319 C9orf47Q6ZRZ4 202 aa8.37□□□□□ -1.07
HLA-DQB3-203ENST00000425319 IQCF2Q8IXL9 164 aa8.37□□□□□ -1.07
HLA-DQB3-203ENST00000425319 C11orf72Q8NBR9 251 aa8.37□□□□□ -1.07
HLA-DQB3-203ENST00000425319 NTN5Q8WTR8 489 aaPredicted RBP8.37□□□□□ -1.07
HLA-DQB3-203ENST00000425319 MITD1Q8WV92 249 aa8.37□□□□□ -1.07
HLA-DQB3-203ENST00000425319 AGPAT4-IT1Q9H0P7 198 aa8.37□□□□□ -1.07
HLA-DQB3-203ENST00000425319 SH3BGRL3Q9H299 93 aa8.37□□□□□ -1.07
HLA-DQB3-203ENST00000425319 MRPL16Q9NX20 251 aaKnown RBP8.37□□□□□ -1.07
HLA-DQB3-203ENST00000425319 TRBV7-9A0A0J9YWB2 115 aa8.36□□□□□ -1.07
HLA-DQB3-203ENST00000425319 LINC00854A0A1B0GVQ3 168 aa8.36□□□□□ -1.07
HLA-DQB3-203ENST00000425319 CST7O76096 145 aa8.36□□□□□ -1.07
HLA-DQB3-203ENST00000425319 SMR3BP02814 79 aaPredicted RBP8.36□□□□□ -1.07
HLA-DQB3-203ENST00000425319 CRISP2P16562 243 aa8.36□□□□□ -1.07
HLA-DQB3-203ENST00000425319 CD300CQ08708 224 aa8.36□□□□□ -1.07
HLA-DQB3-203ENST00000425319 Q6ZSN1 163 aa8.36□□□□□ -1.07
HLA-DQB3-203ENST00000425319 FLVCR2Q9UPI3 526 aa8.36□□□□□ -1.07
HLA-DQB3-203ENST00000425319 WDR83OSQ9Y284 106 aa8.36□□□□□ -1.07
HLA-DQB3-203ENST00000425319 V9GYH0 126 aa8.36□□□□□ -1.07
HLA-DQB3-203ENST00000425319 TRGV11A0A075B6L2 103 aa8.35□□□□□ -1.07
HLA-DQB3-203ENST00000425319 TRAV8-6A0A0B4J262 113 aa8.35□□□□□ -1.07
HLA-DQB3-203ENST00000425319 M0R3E3 92 aa8.35□□□□□ -1.07
HLA-DQB3-203ENST00000425319 CRYGDP07320 174 aa8.35□□□□□ -1.07
HLA-DQB3-203ENST00000425319 NBEAP1P0C6P0 100 aa8.35□□□□□ -1.07
HLA-DQB3-203ENST00000425319 SULT1A1P50225 295 aa8.35□□□□□ -1.07
HLA-DQB3-203ENST00000425319 ZNF138P52744 262 aa8.35□□□□□ -1.07
HLA-DQB3-203ENST00000425319 ARL16Q0P5N6 197 aa8.35□□□□□ -1.07
HLA-DQB3-203ENST00000425319 FHL2Q14192 279 aa8.35□□□□□ -1.07
HLA-DQB3-203ENST00000425319 MORN5Q5VZ52 161 aa8.35□□□□□ -1.07
HLA-DQB3-203ENST00000425319 TMEM70Q9BUB7 260 aa8.35□□□□□ -1.07
HLA-DQB3-203ENST00000425319 SLC25A31Q9H0C2 315 aa8.35□□□□□ -1.07
HLA-DQB3-203ENST00000425319 KCNIP2Q9NS61 270 aa8.35□□□□□ -1.07
HLA-DQB3-203ENST00000425319 ZNF492Q9P255 531 aa8.35□□□□□ -1.07
HLA-DQB3-203ENST00000425319 TNFRSF18Q9Y5U5 241 aa8.35□□□□□ -1.07
HLA-DQB3-203ENST00000425319 FAM24AA6NFZ4 105 aa8.34□□□□□ -1.07
HLA-DQB3-203ENST00000425319 PLA2G1BP04054 148 aaKnown RBP8.34□□□□□ -1.07
HLA-DQB3-203ENST00000425319 GYPEP15421 78 aa8.34□□□□□ -1.07
HLA-DQB3-203ENST00000425319 FGF7P21781 194 aa8.34□□□□□ -1.07
HLA-DQB3-203ENST00000425319 PPT1P50897 306 aa8.34□□□□□ -1.07
HLA-DQB3-203ENST00000425319 FAM122CQ6P4D5 195 aa8.34□□□□□ -1.07
HLA-DQB3-203ENST00000425319 OR4C5Q8NGB2 326 aa8.34□□□□□ -1.07
HLA-DQB3-203ENST00000425319 CHAC2Q8WUX2 184 aa8.34□□□□□ -1.07
HLA-DQB3-203ENST00000425319 ATP5SQ99766 215 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms