RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 J3KRW8 73 aa12.68□□□□□ -0.38
IGHV3-47-201ENST00000425060 IGKV2D-40P01614 121 aaPredicted RBP12.68□□□□□ -0.38
IGHV3-47-201ENST00000425060 SLC25A5P05141 298 aaKnown RBP12.68□□□□□ -0.38
IGHV3-47-201ENST00000425060 CRISP2P16562 243 aa12.68□□□□□ -0.38
IGHV3-47-201ENST00000425060 ATP6V0CP27449 155 aa12.68□□□□□ -0.38
IGHV3-47-201ENST00000425060 DAD1P61803 113 aa12.68□□□□□ -0.38
IGHV3-47-201ENST00000425060 RANP62826 216 aaKnown RBP12.68□□□□□ -0.38
IGHV3-47-201ENST00000425060 UBE2L3P68036 154 aaKnown RBP12.68□□□□□ -0.38
IGHV3-47-201ENST00000425060 HSD17B11Q8NBQ5 300 aa12.68□□□□□ -0.38
IGHV3-47-201ENST00000425060 Q9H3A6 140 aa12.68□□□□□ -0.38
IGHV3-47-201ENST00000425060 TRAV12-3A0A0B4J271 114 aa12.67□□□□□ -0.38
IGHV3-47-201ENST00000425060 ZNF324O75467 553 aaPredicted RBP12.67□□□□□ -0.38
IGHV3-47-201ENST00000425060 HTN1P15515 57 aa12.67□□□□□ -0.38
IGHV3-47-201ENST00000425060 PQLC2Q6ZP29 291 aa12.67□□□□□ -0.38
IGHV3-47-201ENST00000425060 OR10G4Q8NGN3 311 aa12.67□□□□□ -0.38
IGHV3-47-201ENST00000425060 OR10G9Q8NGN4 311 aa12.67□□□□□ -0.38
IGHV3-47-201ENST00000425060 OR10G7Q8NGN6 311 aa12.67□□□□□ -0.38
IGHV3-47-201ENST00000425060 TMEM263Q8WUH6 116 aaKnown RBP12.67□□□□□ -0.38
IGHV3-47-201ENST00000425060 FAM210BQ96KR6 192 aa12.67□□□□□ -0.38
IGHV3-47-201ENST00000425060 ZNF492Q9P255 531 aa12.67□□□□□ -0.38
IGHV3-47-201ENST00000425060 A0A1W2PPV4 95 aa12.66□□□□□ -0.38
IGHV3-47-201ENST00000425060 NMBP08949 121 aa12.66□□□□□ -0.38
IGHV3-47-201ENST00000425060 CD300CQ08708 224 aa12.66□□□□□ -0.38
IGHV3-47-201ENST00000425060 ZFAND2AQ8N6M9 145 aa12.66□□□□□ -0.38
IGHV3-47-201ENST00000425060 INO80EQ8NBZ0 244 aaPredicted RBP12.66□□□□□ -0.38
IGHV3-47-201ENST00000425060 NDUFAF3Q9BU61 184 aa12.66□□□□□ -0.38
IGHV3-47-201ENST00000425060 FXYD6-FXYD2A0A087WZ82 144 aa12.65□□□□□ -0.38
IGHV3-47-201ENST00000425060 C7orf71A4D174 169 aa12.65□□□□□ -0.38
IGHV3-47-201ENST00000425060 RBAKDNA6NC62 111 aa12.65□□□□□ -0.38
IGHV3-47-201ENST00000425060 SERF2P84101 59 aa12.65□□□□□ -0.38
IGHV3-47-201ENST00000425060 TMEM78Q5T7P6 136 aa12.65□□□□□ -0.38
IGHV3-47-201ENST00000425060 PYGO2Q9BRQ0 406 aa12.65□□□□□ -0.38
IGHV3-47-201ENST00000425060 TIMM8BQ9Y5J9 83 aaPredicted RBP12.65□□□□□ -0.38
IGHV3-47-201ENST00000425060 DNAH10Q8IVF4 4471 aa12.64□□□□□ -0.39
IGHV3-47-201ENST00000425060 TRBV7-9A0A0J9YWB2 115 aa12.64□□□□□ -0.39
IGHV3-47-201ENST00000425060 STAG3L2P0CL84 134 aa12.64□□□□□ -0.39
IGHV3-47-201ENST00000425060 STAG3L3P0CL85 134 aa12.64□□□□□ -0.39
IGHV3-47-201ENST00000425060 DEFB130BP0DP73 79 aa12.64□□□□□ -0.39
IGHV3-47-201ENST00000425060 DEFB130AP0DP74 79 aa12.64□□□□□ -0.39
IGHV3-47-201ENST00000425060 BTN1A1Q13410 526 aa12.64□□□□□ -0.39
IGHV3-47-201ENST00000425060 PRR9Q5T870 116 aa12.64□□□□□ -0.39
IGHV3-47-201ENST00000425060 RPL7L1Q6DKI1 246 aaKnown RBP12.64□□□□□ -0.39
IGHV3-47-201ENST00000425060 LINC00612Q8N6U2 182 aa12.64□□□□□ -0.39
IGHV3-47-201ENST00000425060 LINC00467Q9BRT7 94 aa12.64□□□□□ -0.39
IGHV3-47-201ENST00000425060 SH3BGRL3Q9H299 93 aa12.64□□□□□ -0.39
IGHV3-47-201ENST00000425060 DIRC3C9JPN6 131 aa12.63□□□□□ -0.39
IGHV3-47-201ENST00000425060 HMGB3O15347 200 aaKnown RBP12.63□□□□□ -0.39
IGHV3-47-201ENST00000425060 HTN3P15516 51 aa12.63□□□□□ -0.39
IGHV3-47-201ENST00000425060 CSN1S1P47710 185 aa12.63□□□□□ -0.39
IGHV3-47-201ENST00000425060 CDC34P49427 236 aaPredicted RBP12.63□□□□□ -0.39
IGHV3-47-201ENST00000425060 ZNF138P52744 262 aa12.63□□□□□ -0.39
IGHV3-47-201ENST00000425060 CCDC28AQ8IWP9 274 aa12.63□□□□□ -0.39
IGHV3-47-201ENST00000425060 SUN5Q8TC36 379 aa12.63□□□□□ -0.39
IGHV3-47-201ENST00000425060 RXFP4Q8TDU9 374 aa12.63□□□□□ -0.39
IGHV3-47-201ENST00000425060 NOP10Q9NPE3 64 aaKnown RBP12.63□□□□□ -0.39
IGHV3-47-201ENST00000425060 OTORQ9NRC9 128 aa12.63□□□□□ -0.39
IGHV3-47-201ENST00000425060 PGPA6NDG6 321 aa12.62□□□□□ -0.39
IGHV3-47-201ENST00000425060 CBY3A6NI87 242 aa12.62□□□□□ -0.39
IGHV3-47-201ENST00000425060 MBP02144 154 aa12.62□□□□□ -0.39
IGHV3-47-201ENST00000425060 GPX1P07203 203 aa12.62□□□□□ -0.39
IGHV3-47-201ENST00000425060 RNASE4P34096 147 aaKnown RBP12.62□□□□□ -0.39
IGHV3-47-201ENST00000425060 ARL6IP6Q8N6S5 226 aa12.62□□□□□ -0.39
IGHV3-47-201ENST00000425060 RAB24Q969Q5 203 aa12.62□□□□□ -0.39
IGHV3-47-201ENST00000425060 ARL14EPLP0DKL9 152 aa12.61□□□□□ -0.39
IGHV3-47-201ENST00000425060 TMEM88Q6PEY1 159 aa12.61□□□□□ -0.39
IGHV3-47-201ENST00000425060 Q6ZQT7 251 aa12.61□□□□□ -0.39
IGHV3-47-201ENST00000425060 Q8TAT8 98 aa12.61□□□□□ -0.39
IGHV3-47-201ENST00000425060 GNPNAT1Q96EK6 184 aaPredicted RBP12.61□□□□□ -0.39
IGHV3-47-201ENST00000425060 BIRC6Q9NR09 4857 aa12.6□□□□□ -0.39
IGHV3-47-201ENST00000425060 BORCS7-ASMTA0A0B4J1R7 106 aa12.6□□□□□ -0.39
IGHV3-47-201ENST00000425060 SMLR1H3BR10 107 aa12.6□□□□□ -0.39
IGHV3-47-201ENST00000425060 P0DMU3 169 aa12.6□□□□□ -0.39
IGHV3-47-201ENST00000425060 FAM231AP0DMU4 169 aa12.6□□□□□ -0.39
IGHV3-47-201ENST00000425060 FAM231CP0DMU5 169 aa12.6□□□□□ -0.39
IGHV3-47-201ENST00000425060 ANXA2RQ3ZCQ2 193 aa12.6□□□□□ -0.39
IGHV3-47-201ENST00000425060 C11orf72Q8NBR9 251 aa12.6□□□□□ -0.39
IGHV3-47-201ENST00000425060 TMED6Q8WW62 240 aa12.6□□□□□ -0.39
IGHV3-47-201ENST00000425060 HYLS1Q96M11 299 aa12.6□□□□□ -0.39
IGHV3-47-201ENST00000425060 CYTL1Q9NRR1 136 aa12.6□□□□□ -0.39
IGHV3-47-201ENST00000425060 ARPC5O15511 151 aa12.59□□□□□ -0.39
IGHV3-47-201ENST00000425060 ATP5G1P05496 136 aa12.59□□□□□ -0.39
IGHV3-47-201ENST00000425060 ATP5G3P48201 142 aa12.59□□□□□ -0.39
IGHV3-47-201ENST00000425060 DAZ2Q13117 558 aaKnown RBP12.59□□□□□ -0.39
IGHV3-47-201ENST00000425060 SSX7Q7RTT5 188 aa12.59□□□□□ -0.39
IGHV3-47-201ENST00000425060 EIF4E3Q8N5X7 224 aaKnown RBP12.59□□□□□ -0.39
IGHV3-47-201ENST00000425060 POM121L12Q8N7R1 296 aa12.59□□□□□ -0.39
IGHV3-47-201ENST00000425060 LENEPQ9Y5L5 61 aa12.59□□□□□ -0.39
IGHV3-47-201ENST00000425060 SNURFLB1AK76 121 aa12.58□□□□□ -0.4
IGHV3-47-201ENST00000425060 TAAR5O14804 337 aa12.58□□□□□ -0.4
IGHV3-47-201ENST00000425060 GCHFRP30047 84 aa12.58□□□□□ -0.4
IGHV3-47-201ENST00000425060 FAM74A1Q5RGS3 127 aa12.58□□□□□ -0.4
IGHV3-47-201ENST00000425060 ACTR3CQ9C0K3 210 aaPredicted RBP12.58□□□□□ -0.4
IGHV3-47-201ENST00000425060 ZNF726P1Q15940 193 aa12.57□□□□□ -0.4
IGHV3-47-201ENST00000425060 ZNF680Q8NEM1 530 aa12.57□□□□□ -0.4
IGHV3-47-201ENST00000425060 CMTM2Q8TAZ6 248 aa12.57□□□□□ -0.4
IGHV3-47-201ENST00000425060 ST6GAL2Q96JF0 529 aa12.57□□□□□ -0.4
IGHV3-47-201ENST00000425060 GSN-AS1Q9NRJ2 163 aa12.57□□□□□ -0.4
IGHV3-47-201ENST00000425060 IGHV1OR15-1A0A075B7D0 117 aa12.56□□□□□ -0.4
IGHV3-47-201ENST00000425060 F5H768 121 aa12.56□□□□□ -0.4
IGHV3-47-201ENST00000425060 CXorf1O96002 111 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms