RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 KLF14Q8TD94 323 aaPredicted RBP2.37□□□□□ -2.03
SF3B1-205ENST00000424674 POP5Q969H6 163 aaKnown RBP2.37□□□□□ -2.03
SF3B1-205ENST00000424674 LSM10Q969L4 123 aaKnown RBP2.37□□□□□ -2.03
SF3B1-205ENST00000424674 CST11Q9H112 138 aa2.37□□□□□ -2.03
SF3B1-205ENST00000424674 BRWD3Q6RI45 1802 aa2.37□□□□□ -2.03
SF3B1-205ENST00000424674 ATG2BQ96BY7 2078 aa2.37□□□□□ -2.03
SF3B1-205ENST00000424674 AKAP11Q9UKA4 1901 aa2.36□□□□□ -2.03
SF3B1-205ENST00000424674 PCM1Q15154 2024 aa2.36□□□□□ -2.03
SF3B1-205ENST00000424674 MUC21A0A0G2JKD1 596 aa2.36□□□□□ -2.03
SF3B1-205ENST00000424674 A6NN06 94 aa2.36□□□□□ -2.03
SF3B1-205ENST00000424674 PANO1I0J062 215 aa2.36□□□□□ -2.03
SF3B1-205ENST00000424674 M0R233 179 aa2.36□□□□□ -2.03
SF3B1-205ENST00000424674 PROSCO94903 275 aa2.36□□□□□ -2.03
SF3B1-205ENST00000424674 IL5P05113 134 aa2.36□□□□□ -2.03
SF3B1-205ENST00000424674 ATP5EP56381 51 aaPredicted RBP2.36□□□□□ -2.03
SF3B1-205ENST00000424674 Q6ZQT0 140 aa2.36□□□□□ -2.03
SF3B1-205ENST00000424674 S100A13Q99584 98 aa2.36□□□□□ -2.03
SF3B1-205ENST00000424674 SMIM7Q9BQ49 75 aa2.36□□□□□ -2.03
SF3B1-205ENST00000424674 C14orf132Q9NPU4 83 aa2.36□□□□□ -2.03
SF3B1-205ENST00000424674 CCDC141Q6ZP82 1450 aa2.36□□□□□ -2.03
SF3B1-205ENST00000424674 FRMPD1Q5SYB0 1578 aa2.36□□□□□ -2.03
SF3B1-205ENST00000424674 WNK3Q9BYP7 1800 aa2.35□□□□□ -2.03
SF3B1-205ENST00000424674 LTBP4Q8N2S1 1624 aa2.35□□□□□ -2.03
SF3B1-205ENST00000424674 UACAQ9BZF9 1416 aa2.35□□□□□ -2.03
SF3B1-205ENST00000424674 MYH6P13533 1939 aa2.35□□□□□ -2.03
SF3B1-205ENST00000424674 GAPVD1Q14C86 1478 aa2.35□□□□□ -2.03
SF3B1-205ENST00000424674 C11orf86A6NJI1 115 aa2.35□□□□□ -2.03
SF3B1-205ENST00000424674 F8W1H4 67 aa2.35□□□□□ -2.03
SF3B1-205ENST00000424674 GYPAP02724 150 aa2.35□□□□□ -2.03
SF3B1-205ENST00000424674 MT-ATP8P03928 68 aa2.35□□□□□ -2.03
SF3B1-205ENST00000424674 ASIPP42127 132 aa2.35□□□□□ -2.03
SF3B1-205ENST00000424674 PEA15Q15121 130 aa2.35□□□□□ -2.03
SF3B1-205ENST00000424674 SPANXN5Q5MJ07 72 aa2.35□□□□□ -2.03
SF3B1-205ENST00000424674 FAM27BQ5VT28 67 aa2.35□□□□□ -2.03
SF3B1-205ENST00000424674 Q6P435 159 aa2.35□□□□□ -2.03
SF3B1-205ENST00000424674 IGFL3Q6UXB1 125 aa2.35□□□□□ -2.03
SF3B1-205ENST00000424674 Q6ZR54 194 aa2.35□□□□□ -2.03
SF3B1-205ENST00000424674 Q6ZS52 159 aa2.35□□□□□ -2.03
SF3B1-205ENST00000424674 FP248Q71RG6 208 aaPredicted RBP2.35□□□□□ -2.03
SF3B1-205ENST00000424674 SBSPONQ8IVN8 264 aa2.35□□□□□ -2.03
SF3B1-205ENST00000424674 UBALD1Q8TB05 177 aa2.35□□□□□ -2.03
SF3B1-205ENST00000424674 DPH3P1Q9H4G8 78 aa2.35□□□□□ -2.03
SF3B1-205ENST00000424674 NPVFQ9HCQ7 196 aa2.35□□□□□ -2.03
SF3B1-205ENST00000424674 HHLA3Q9XRX5 114 aa2.35□□□□□ -2.03
SF3B1-205ENST00000424674 MYH9P35579 1960 aaKnown RBP2.35□□□□□ -2.03
SF3B1-205ENST00000424674 ABCC3O15438 1527 aa2.35□□□□□ -2.03
SF3B1-205ENST00000424674 ARHGAP5Q13017 1502 aa2.35□□□□□ -2.03
SF3B1-205ENST00000424674 LTBP1Q14766 1721 aa2.34□□□□□ -2.03
SF3B1-205ENST00000424674 RBBP6Q7Z6E9 1792 aaKnown RBP2.34□□□□□ -2.03
SF3B1-205ENST00000424674 IGLV4-69A0A075B6H9 119 aa2.34□□□□□ -2.03
SF3B1-205ENST00000424674 TRAV14DV4A0A0A6YYC5 116 aa2.34□□□□□ -2.03
SF3B1-205ENST00000424674 IGHV1-18A0A0C4DH31 117 aa2.34□□□□□ -2.03
SF3B1-205ENST00000424674 A0A1B0GU33 70 aa2.34□□□□□ -2.03
SF3B1-205ENST00000424674 UBE2L5PA0A1B0GUS4 154 aa2.34□□□□□ -2.03
SF3B1-205ENST00000424674 ZNF861PO60384 105 aa2.34□□□□□ -2.03
SF3B1-205ENST00000424674 IGLV1-51P01701 117 aa2.34□□□□□ -2.03
SF3B1-205ENST00000424674 CLPSP04118 112 aa2.34□□□□□ -2.03
SF3B1-205ENST00000424674 ZNF14P17017 642 aaPredicted RBP2.34□□□□□ -2.03
SF3B1-205ENST00000424674 ZNF22P17026 224 aaPredicted RBP2.34□□□□□ -2.03
SF3B1-205ENST00000424674 ROMO1P60602 79 aa2.34□□□□□ -2.03
SF3B1-205ENST00000424674 UBE2L3P68036 154 aaKnown RBP2.34□□□□□ -2.03
SF3B1-205ENST00000424674 FAM74A1Q5RGS3 127 aa2.34□□□□□ -2.03
SF3B1-205ENST00000424674 LINC00299Q6ZSB3 139 aa2.34□□□□□ -2.03
SF3B1-205ENST00000424674 HMGN2P46Q86SG4 172 aa2.34□□□□□ -2.03
SF3B1-205ENST00000424674 C5orf38Q86SI9 138 aa2.34□□□□□ -2.03
SF3B1-205ENST00000424674 Q8IYB0 196 aa2.34□□□□□ -2.03
SF3B1-205ENST00000424674 Q8N814 137 aa2.34□□□□□ -2.03
SF3B1-205ENST00000424674 C15orf53Q8NAA6 179 aa2.34□□□□□ -2.03
SF3B1-205ENST00000424674 C10orf105Q8TEF2 133 aa2.34□□□□□ -2.03
SF3B1-205ENST00000424674 C10orf82Q8WW14 230 aa2.34□□□□□ -2.03
SF3B1-205ENST00000424674 CXCL16Q9H2A7 254 aa2.34□□□□□ -2.03
SF3B1-205ENST00000424674 RPS10P5Q9NQ39 176 aa2.34□□□□□ -2.03
SF3B1-205ENST00000424674 KIF13AQ9H1H9 1805 aa2.33□□□□□ -2.04
SF3B1-205ENST00000424674 DNMBPQ6XZF7 1577 aa2.33□□□□□ -2.04
SF3B1-205ENST00000424674 IGHV3-64A0A075B6Q5 118 aa2.33□□□□□ -2.04
SF3B1-205ENST00000424674 TRAV2A0A0B4J234 112 aa2.33□□□□□ -2.04
SF3B1-205ENST00000424674 UBL3O95164 117 aa2.33□□□□□ -2.04
SF3B1-205ENST00000424674 BAALC-AS2P0C853 105 aa2.33□□□□□ -2.04
SF3B1-205ENST00000424674 SNCAP37840 140 aa2.33□□□□□ -2.04
SF3B1-205ENST00000424674 POLR2JP52435 117 aaKnown RBP2.33□□□□□ -2.04
SF3B1-205ENST00000424674 NNATQ16517 81 aa2.33□□□□□ -2.04
SF3B1-205ENST00000424674 SPRNQ5BIV9 151 aa2.33□□□□□ -2.04
SF3B1-205ENST00000424674 SPANXN1Q5VSR9 72 aa2.33□□□□□ -2.04
SF3B1-205ENST00000424674 ZNF720Q7Z2F6 126 aa2.33□□□□□ -2.04
SF3B1-205ENST00000424674 Q8NAQ8 132 aa2.33□□□□□ -2.04
SF3B1-205ENST00000424674 LINC00301Q8NCQ3 95 aa2.33□□□□□ -2.04
SF3B1-205ENST00000424674 DSCR8Q96T75 97 aa2.33□□□□□ -2.04
SF3B1-205ENST00000424674 AGRNO00468 2067 aa2.33□□□□□ -2.04
SF3B1-205ENST00000424674 DOCK8Q8NF50 2099 aa2.33□□□□□ -2.04
SF3B1-205ENST00000424674 KIF26AQ9ULI4 1882 aaPredicted RBP2.33□□□□□ -2.04
SF3B1-205ENST00000424674 ANAPC1Q9H1A4 1944 aa2.32□□□□□ -2.04
SF3B1-205ENST00000424674 SPHKAPQ2M3C7 1700 aa2.32□□□□□ -2.04
SF3B1-205ENST00000424674 IGKV2D-26A0A0A0MRZ7 120 aa2.32□□□□□ -2.04
SF3B1-205ENST00000424674 LOC107984156A0A0G2JMH3 177 aa2.32□□□□□ -2.04
SF3B1-205ENST00000424674 RBAKDNA6NC62 111 aa2.32□□□□□ -2.04
SF3B1-205ENST00000424674 C16orf90A8MZG2 172 aa2.32□□□□□ -2.04
SF3B1-205ENST00000424674 K7EP34 96 aa2.32□□□□□ -2.04
SF3B1-205ENST00000424674 CYB5AP00167 134 aa2.32□□□□□ -2.04
SF3B1-205ENST00000424674 CRPP02741 224 aa2.32□□□□□ -2.04
SF3B1-205ENST00000424674 MGST1P10620 155 aaKnown RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms