RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 TRBV7-9A0A0J9YWB2 115 aa13.29□□□□□ -0.28
HDAC6-205ENST00000423941 INSP01308 110 aa13.29□□□□□ -0.28
HDAC6-205ENST00000423941 IGKV2D-40P01614 121 aaPredicted RBP13.29□□□□□ -0.28
HDAC6-205ENST00000423941 CRISP2P16562 243 aa13.29□□□□□ -0.28
HDAC6-205ENST00000423941 CSN1S1P47710 185 aa13.29□□□□□ -0.28
HDAC6-205ENST00000423941 FHITP49789 147 aa13.29□□□□□ -0.28
HDAC6-205ENST00000423941 MBD3L1Q8WWY6 194 aa13.29□□□□□ -0.28
HDAC6-205ENST00000423941 ZNF492Q9P255 531 aa13.29□□□□□ -0.28
HDAC6-205ENST00000423941 A0A1W2PRE2 83 aa13.28□□□□□ -0.28
HDAC6-205ENST00000423941 KLLNB2CW77 178 aa13.28□□□□□ -0.28
HDAC6-205ENST00000423941 FAM74A1Q5RGS3 127 aa13.28□□□□□ -0.28
HDAC6-205ENST00000423941 DPPA3Q6W0C5 159 aa13.28□□□□□ -0.28
HDAC6-205ENST00000423941 TMEM256Q8N2U0 113 aa13.28□□□□□ -0.28
HDAC6-205ENST00000423941 TMED6Q8WW62 240 aa13.28□□□□□ -0.28
HDAC6-205ENST00000423941 DEFB4AO15263 64 aa13.27□□□□□ -0.29
HDAC6-205ENST00000423941 LEPP41159 167 aa13.27□□□□□ -0.29
HDAC6-205ENST00000423941 ZFP69Q49AA0 526 aa13.27□□□□□ -0.29
HDAC6-205ENST00000423941 CASC10Q5T4H9 136 aa13.27□□□□□ -0.29
HDAC6-205ENST00000423941 SLC51BQ86UW2 128 aa13.27□□□□□ -0.29
HDAC6-205ENST00000423941 ZFAND2AQ8N6M9 145 aa13.27□□□□□ -0.29
HDAC6-205ENST00000423941 TMPRSS5Q9H3S3 457 aa13.27□□□□□ -0.29
HDAC6-205ENST00000423941 LENEPQ9Y5L5 61 aa13.27□□□□□ -0.29
HDAC6-205ENST00000423941 MAP1LC3B2A6NCE7 125 aa13.26□□□□□ -0.29
HDAC6-205ENST00000423941 GGTLC3B5MD39 225 aa13.26□□□□□ -0.29
HDAC6-205ENST00000423941 ZNF138P52744 262 aa13.26□□□□□ -0.29
HDAC6-205ENST00000423941 TMEM78Q5T7P6 136 aa13.26□□□□□ -0.29
HDAC6-205ENST00000423941 GFI1BQ5VTD9 330 aa13.26□□□□□ -0.29
HDAC6-205ENST00000423941 C5orf17Q8NAS9 161 aa13.26□□□□□ -0.29
HDAC6-205ENST00000423941 MAP1LC3BQ9GZQ8 125 aa13.26□□□□□ -0.29
HDAC6-205ENST00000423941 CSMD3Q7Z407 3707 aa13.25□□□□□ -0.29
HDAC6-205ENST00000423941 IGHV3OR16-12A0A075B7B8 117 aa13.25□□□□□ -0.29
HDAC6-205ENST00000423941 TMEM189A5PLL7 270 aa13.25□□□□□ -0.29
HDAC6-205ENST00000423941 ZNF324O75467 553 aaPredicted RBP13.25□□□□□ -0.29
HDAC6-205ENST00000423941 HBE1P02100 147 aa13.25□□□□□ -0.29
HDAC6-205ENST00000423941 FGF8P55075 233 aaPredicted RBP13.25□□□□□ -0.29
HDAC6-205ENST00000423941 SUMO1P63165 101 aaKnown RBP13.25□□□□□ -0.29
HDAC6-205ENST00000423941 SERTM2A0A1B0GWG4 89 aa13.24□□□□□ -0.29
HDAC6-205ENST00000423941 RAB5CP51148 216 aa13.24□□□□□ -0.29
HDAC6-205ENST00000423941 RRN3P1Q2M238 152 aa13.24□□□□□ -0.29
HDAC6-205ENST00000423941 EIF5AL1Q6IS14 154 aaKnown RBP13.24□□□□□ -0.29
HDAC6-205ENST00000423941 CMTM2Q8TAZ6 248 aa13.24□□□□□ -0.29
HDAC6-205ENST00000423941 YTHDF2Q9Y5A9 579 aaKnown RBP13.24□□□□□ -0.29
HDAC6-205ENST00000423941 FAM74A7A6NL05 159 aa13.23□□□□□ -0.29
HDAC6-205ENST00000423941 H7BYZ3 331 aa13.23□□□□□ -0.29
HDAC6-205ENST00000423941 TCRAP04437 139 aa13.23□□□□□ -0.29
HDAC6-205ENST00000423941 SULT1A2P50226 295 aa13.23□□□□□ -0.29
HDAC6-205ENST00000423941 TAS2R60P59551 318 aa13.23□□□□□ -0.29
HDAC6-205ENST00000423941 C11orf45Q8TAV5 145 aa13.23□□□□□ -0.29
HDAC6-205ENST00000423941 FAM213BQ8TBF2 198 aa13.23□□□□□ -0.29
HDAC6-205ENST00000423941 TMEM208Q9BTX3 173 aa13.23□□□□□ -0.29
HDAC6-205ENST00000423941 NKX6-2Q9C056 277 aaPredicted RBP13.23□□□□□ -0.29
HDAC6-205ENST00000423941 EPDR1Q9UM22 224 aa13.23□□□□□ -0.29
HDAC6-205ENST00000423941 ARL2-SNX15V9GYD0 113 aa13.23□□□□□ -0.29
HDAC6-205ENST00000423941 TRAV1-1A0A0B4J248 108 aa13.22□□□□□ -0.29
HDAC6-205ENST00000423941 PLAC8L1A1L4L8 177 aa13.22□□□□□ -0.29
HDAC6-205ENST00000423941 C7orf71A4D174 169 aa13.22□□□□□ -0.29
HDAC6-205ENST00000423941 ZNF705GA8MUZ8 300 aaPredicted RBP13.22□□□□□ -0.29
HDAC6-205ENST00000423941 PRM2P04554 102 aa13.22□□□□□ -0.29
HDAC6-205ENST00000423941 AZU1P20160 251 aa13.22□□□□□ -0.29
HDAC6-205ENST00000423941 GNG5P63218 68 aa13.22□□□□□ -0.29
HDAC6-205ENST00000423941 GOLT1AQ6ZVE7 132 aa13.22□□□□□ -0.29
HDAC6-205ENST00000423941 CCDC28AQ8IWP9 274 aa13.22□□□□□ -0.29
HDAC6-205ENST00000423941 Q8TAT8 98 aa13.22□□□□□ -0.29
HDAC6-205ENST00000423941 LINC01587Q99440 93 aa13.22□□□□□ -0.29
HDAC6-205ENST00000423941 LINC00467Q9BRT7 94 aa13.22□□□□□ -0.29
HDAC6-205ENST00000423941 CELA1Q9UNI1 258 aa13.22□□□□□ -0.29
HDAC6-205ENST00000423941 TRAV12-3A0A0B4J271 114 aa13.21□□□□□ -0.29
HDAC6-205ENST00000423941 LOC102723971A0A1B0GUV8 181 aa13.21□□□□□ -0.29
HDAC6-205ENST00000423941 IGLV2-11P01706 119 aa13.21□□□□□ -0.29
HDAC6-205ENST00000423941 PRR9Q5T870 116 aa13.21□□□□□ -0.29
HDAC6-205ENST00000423941 SFT2D1Q8WV19 159 aa13.21□□□□□ -0.29
HDAC6-205ENST00000423941 TVP23CQ96ET8 276 aa13.21□□□□□ -0.29
HDAC6-205ENST00000423941 TENM2Q9NT68 2774 aa13.2□□□□□ -0.3
HDAC6-205ENST00000423941 GPX1P07203 203 aa13.2□□□□□ -0.3
HDAC6-205ENST00000423941 H2AFB1P0C5Y9 115 aa13.2□□□□□ -0.3
HDAC6-205ENST00000423941 NANOS2P60321 138 aaKnown RBP13.2□□□□□ -0.3
HDAC6-205ENST00000423941 BTN1A1Q13410 526 aa13.2□□□□□ -0.3
HDAC6-205ENST00000423941 ZFAND6Q6FIF0 208 aa13.2□□□□□ -0.3
HDAC6-205ENST00000423941 IQCF2Q8IXL9 164 aa13.2□□□□□ -0.3
HDAC6-205ENST00000423941 PYGO2Q9BRQ0 406 aa13.2□□□□□ -0.3
HDAC6-205ENST00000423941 DKK2Q9UBU2 259 aa13.2□□□□□ -0.3
HDAC6-205ENST00000423941 TRAV8-1A0A0A6YYK1 113 aa13.19□□□□□ -0.3
HDAC6-205ENST00000423941 CXorf65A6NEN9 183 aa13.19□□□□□ -0.3
HDAC6-205ENST00000423941 ZNF493Q6ZR52 646 aa13.19□□□□□ -0.3
HDAC6-205ENST00000423941 RNASE8Q8TDE3 154 aaKnown RBP13.19□□□□□ -0.3
HDAC6-205ENST00000423941 NIPSNAP3BQ9BS92 247 aa13.19□□□□□ -0.3
HDAC6-205ENST00000423941 ATG101Q9BSB4 218 aa13.19□□□□□ -0.3
HDAC6-205ENST00000423941 STARD9Q9P2P6 4700 aa13.19□□□□□ -0.3
HDAC6-205ENST00000423941 J3KRW8 73 aa13.18□□□□□ -0.3
HDAC6-205ENST00000423941 RNASE4P34096 147 aaKnown RBP13.18□□□□□ -0.3
HDAC6-205ENST00000423941 NKX2-5P52952 324 aaPredicted RBP13.18□□□□□ -0.3
HDAC6-205ENST00000423941 UBE2G2P60604 165 aa13.18□□□□□ -0.3
HDAC6-205ENST00000423941 C12orf74Q32Q52 190 aa13.18□□□□□ -0.3
HDAC6-205ENST00000423941 Q6AWC8 147 aa13.18□□□□□ -0.3
HDAC6-205ENST00000423941 CYB561D1Q8N8Q1 229 aa13.18□□□□□ -0.3
HDAC6-205ENST00000423941 RPH3ALQ9UNE2 315 aa13.18□□□□□ -0.3
HDAC6-205ENST00000423941 TEX48A0A1B0GUV7 120 aa13.17□□□□□ -0.3
HDAC6-205ENST00000423941 FBLL1A6NHQ2 334 aaKnown RBP13.17□□□□□ -0.3
HDAC6-205ENST00000423941 K7EQM0 130 aa13.17□□□□□ -0.3
HDAC6-205ENST00000423941 SPART-AS1P0CW21 52 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms