RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 C9orf139Q6ZV77 190 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 H1FOOQ8IZA3 346 aaPredicted RBP2.79□□□□□ -1.96
TOP2A-201ENST00000423485 C9orf85Q96MD7 179 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 TRAV21A0A0B4J279 112 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 DAPP51397 102 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 KIAA0141Q14154 515 aaPredicted RBP2.79□□□□□ -1.96
TOP2A-201ENST00000423485 Q1RN00 199 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 LYPD2Q6UXB3 125 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 Q6ZPA2 131 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 NIT1Q86X76 327 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 OR5A1Q8NGJ0 315 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 AQP3Q92482 292 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 LEAP2Q969E1 77 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 OR8B4Q96RC9 309 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 CST9LQ9H4G1 147 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 ISG20L2Q9H9L3 353 aaKnown RBP2.79□□□□□ -1.96
TOP2A-201ENST00000423485 Q9N2K0 584 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 CMC2Q9NRP2 79 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 EPPK1P58107 5090 aaKnown RBP2.79□□□□□ -1.96
TOP2A-201ENST00000423485 FAM74A7A6NL05 159 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 LINC00587B1AMM8 73 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 FCN3O75636 299 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 ZNF146Q15072 292 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 C1orf194Q5T5A4 169 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 C22orf42Q6IC83 251 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 OR10G9Q8NGN4 311 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.79□□□□□ -1.96
TOP2A-201ENST00000423485 SAA2-SAA4A0A096LPE2 208 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 NXPH3O95157 252 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 MPC2O95563 127 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 PMP2P02689 132 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 BTCP35070 178 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 NANOS2P60321 138 aaKnown RBP2.79□□□□□ -1.96
TOP2A-201ENST00000423485 RPL37AP61513 92 aaKnown RBP2.79□□□□□ -1.96
TOP2A-201ENST00000423485 UBE2L3P68036 154 aaKnown RBP2.79□□□□□ -1.96
TOP2A-201ENST00000423485 HGFACQ04756 655 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 GAGE2BQ13066 116 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 S100A7L2Q5SY68 101 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 SERTAD4-AS1Q5TG53 156 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 PRSS54Q6PEW0 395 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 SPATA12Q7Z6I5 190 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 ZNF645Q8N7E2 425 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 VN1R17PQ8TDU5 208 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 C14orf144Q96I85 54 aa2.79□□□□□ -1.96
TOP2A-201ENST00000423485 LRP1BQ9NZR2 4599 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 IGHV4-4A0A075B6R2 117 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 A0A096LPF7 62 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 A8MWP6 167 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 J3QRE1 110 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 DEFB4AO15263 64 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 HLA-DRB1P01911 266 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 APCSP02743 223 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 CRYGCP07315 174 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 PRB4P10163 310 aaPredicted RBP2.78□□□□□ -1.96
TOP2A-201ENST00000423485 HIST1H1DP16402 221 aaKnown RBP2.78□□□□□ -1.96
TOP2A-201ENST00000423485 LY6G6FQ5SQ64 297 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 FAM71F2Q6NXP2 309 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 WDR82Q6UXN9 313 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 TIMM17AQ99595 171 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 MRPL36Q9P0J6 103 aaKnown RBP2.78□□□□□ -1.96
TOP2A-201ENST00000423485 A0A1W2PQL4 384 aaPredicted RBP2.78□□□□□ -1.96
TOP2A-201ENST00000423485 CRIP2P52943 208 aaPredicted RBP2.78□□□□□ -1.96
TOP2A-201ENST00000423485 CD300EQ496F6 205 aaPredicted RBP2.78□□□□□ -1.96
TOP2A-201ENST00000423485 COL5A1-AS1Q5SY13 56 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 DHRS11Q6UWP2 260 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 NTN5Q8WTR8 489 aaPredicted RBP2.78□□□□□ -1.96
TOP2A-201ENST00000423485 DSCR8Q96T75 97 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 SMIM2Q9BVW6 85 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 NIT2Q9NQR4 276 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 ZNF331Q9NQX6 463 aaPredicted RBP2.78□□□□□ -1.96
TOP2A-201ENST00000423485 MTFP1Q9UDX5 166 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 S4R3C0 116 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 M0R2T5 61 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 IGLV2-11P01706 119 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 AMY1AP04745 511 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 TNFRSF9Q07011 255 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 POU2AF1Q16633 256 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 FOXI2Q6ZQN5 318 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 HIST1H2BAQ96A08 127 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 FAM3DQ96BQ1 224 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 ANAPC16Q96DE5 110 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 TREM1Q9NP99 234 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 BET1LQ9NYM9 111 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 NPIPB7O75200 414 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 IAPPP10997 89 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 DEFB104AQ8WTQ1 72 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 SRSF8Q9BRL6 282 aaKnown RBP2.78□□□□□ -1.96
TOP2A-201ENST00000423485 CDIP1Q9H305 208 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 MSRB1Q9NZV6 116 aa2.78□□□□□ -1.96
TOP2A-201ENST00000423485 AK6Q9Y3D8 172 aaKnown RBP2.78□□□□□ -1.96
TOP2A-201ENST00000423485 K7ERU9 68 aa2.78□□□□□ -1.97
TOP2A-201ENST00000423485 PSMB3P49720 205 aa2.78□□□□□ -1.97
TOP2A-201ENST00000423485 ID3Q02535 119 aa2.78□□□□□ -1.97
TOP2A-201ENST00000423485 CDK5R1Q15078 307 aa2.78□□□□□ -1.97
TOP2A-201ENST00000423485 TMEM236Q5W0B7 351 aa2.78□□□□□ -1.97
TOP2A-201ENST00000423485 PRR27Q6MZM9 219 aa2.78□□□□□ -1.97
TOP2A-201ENST00000423485 LINC01551Q86U37 167 aa2.78□□□□□ -1.97
TOP2A-201ENST00000423485 OR11H7Q8NGC8 314 aa2.78□□□□□ -1.97
TOP2A-201ENST00000423485 LGALS14Q8TCE9 139 aa2.78□□□□□ -1.97
TOP2A-201ENST00000423485 GAFA1Q96PS6 74 aa2.78□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms