RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 EPDR1Q9UM22 224 aa12.43□□□□□ -0.42
COL7A1-202ENST00000422991 CT45A10P0DMU9 189 aa12.42□□□□□ -0.42
COL7A1-202ENST00000422991 FXYD7P58549 80 aa12.42□□□□□ -0.42
COL7A1-202ENST00000422991 LINC00477Q96M19 166 aa12.42□□□□□ -0.42
COL7A1-202ENST00000422991 TCEAL7Q9BRU2 100 aa12.42□□□□□ -0.42
COL7A1-202ENST00000422991 ATG101Q9BSB4 218 aa12.42□□□□□ -0.42
COL7A1-202ENST00000422991 SERTM2A0A1B0GWG4 89 aa12.41□□□□□ -0.42
COL7A1-202ENST00000422991 M0R2Z0 102 aa12.41□□□□□ -0.42
COL7A1-202ENST00000422991 IFNA1P01562 189 aa12.41□□□□□ -0.42
COL7A1-202ENST00000422991 SPINK13Q1W4C9 94 aa12.41□□□□□ -0.42
COL7A1-202ENST00000422991 DEFB135Q30KP9 77 aa12.41□□□□□ -0.42
COL7A1-202ENST00000422991 TMEM78Q5T7P6 136 aa12.41□□□□□ -0.42
COL7A1-202ENST00000422991 Q6ZWC4 215 aa12.41□□□□□ -0.42
COL7A1-202ENST00000422991 CYB561D1Q8N8Q1 229 aa12.41□□□□□ -0.42
COL7A1-202ENST00000422991 C1QTNF4Q9BXJ3 329 aa12.41□□□□□ -0.42
COL7A1-202ENST00000422991 PPP1R14DQ9NXH3 145 aa12.41□□□□□ -0.42
COL7A1-202ENST00000422991 XCL2Q9UBD3 114 aa12.41□□□□□ -0.42
COL7A1-202ENST00000422991 STAB2Q8WWQ8 2551 aa12.4□□□□□ -0.42
COL7A1-202ENST00000422991 C11orf94C9JXX5 98 aa12.4□□□□□ -0.42
COL7A1-202ENST00000422991 PEX7O00628 323 aa12.4□□□□□ -0.42
COL7A1-202ENST00000422991 AMBPP02760 352 aa12.4□□□□□ -0.42
COL7A1-202ENST00000422991 BCL2P10415 239 aa12.4□□□□□ -0.42
COL7A1-202ENST00000422991 Q8TAT8 98 aa12.4□□□□□ -0.42
COL7A1-202ENST00000422991 PCNPQ8WW12 178 aaKnown RBP12.4□□□□□ -0.42
COL7A1-202ENST00000422991 HIST1H2BAQ96A08 127 aa12.4□□□□□ -0.42
COL7A1-202ENST00000422991 FAM19A4Q96LR4 140 aa12.4□□□□□ -0.42
COL7A1-202ENST00000422991 SPATA25Q9BR10 227 aa12.4□□□□□ -0.42
COL7A1-202ENST00000422991 RETNQ9HD89 108 aa12.4□□□□□ -0.42
COL7A1-202ENST00000422991 ZNF492Q9P255 531 aa12.4□□□□□ -0.42
COL7A1-202ENST00000422991 TRAV8-1A0A0A6YYK1 113 aa12.39□□□□□ -0.43
COL7A1-202ENST00000422991 K7EQM0 130 aa12.39□□□□□ -0.43
COL7A1-202ENST00000422991 NMBP08949 121 aa12.39□□□□□ -0.43
COL7A1-202ENST00000422991 LEPP41159 167 aa12.39□□□□□ -0.43
COL7A1-202ENST00000422991 ZNF138P52744 262 aa12.39□□□□□ -0.43
COL7A1-202ENST00000422991 IFITM2Q01629 132 aa12.39□□□□□ -0.43
COL7A1-202ENST00000422991 CSNK1G2-AS1Q8NCQ2 148 aa12.39□□□□□ -0.43
COL7A1-202ENST00000422991 TP53TG1Q9Y2A0 90 aa12.39□□□□□ -0.43
COL7A1-202ENST00000422991 CRXO43186 299 aaPredicted RBP12.38□□□□□ -0.43
COL7A1-202ENST00000422991 NHLRC4P0CG21 123 aaPredicted RBP12.38□□□□□ -0.43
COL7A1-202ENST00000422991 CRISP2P16562 243 aa12.38□□□□□ -0.43
COL7A1-202ENST00000422991 TSPOP30536 169 aa12.38□□□□□ -0.43
COL7A1-202ENST00000422991 TAGLN2P37802 199 aaKnown RBP12.38□□□□□ -0.43
COL7A1-202ENST00000422991 CDKN1BP46527 198 aa12.38□□□□□ -0.43
COL7A1-202ENST00000422991 TMEM75Q8N9X5 138 aa12.38□□□□□ -0.43
COL7A1-202ENST00000422991 RNF183Q96D59 192 aa12.38□□□□□ -0.43
COL7A1-202ENST00000422991 IGF2BP2-AS1Q96M15 143 aa12.38□□□□□ -0.43
COL7A1-202ENST00000422991 RCHY1Q96PM5 261 aa12.38□□□□□ -0.43
COL7A1-202ENST00000422991 TXNDC17Q9BRA2 123 aa12.38□□□□□ -0.43
COL7A1-202ENST00000422991 HUWE1Q7Z6Z7 4374 aaKnown RBP12.37□□□□□ -0.43
COL7A1-202ENST00000422991 TRBV7-9A0A0J9YWB2 115 aa12.37□□□□□ -0.43
COL7A1-202ENST00000422991 LOC102723971A0A1B0GUV8 181 aa12.37□□□□□ -0.43
COL7A1-202ENST00000422991 SCO2A0A1W2PP80 73 aa12.37□□□□□ -0.43
COL7A1-202ENST00000422991 F6UZH7 168 aa12.37□□□□□ -0.43
COL7A1-202ENST00000422991 SPRY2O43597 315 aa12.37□□□□□ -0.43
COL7A1-202ENST00000422991 INSP01308 110 aa12.37□□□□□ -0.43
COL7A1-202ENST00000422991 IGLV2-11P01706 119 aa12.37□□□□□ -0.43
COL7A1-202ENST00000422991 MEF2BQ02080 365 aaPredicted RBP12.37□□□□□ -0.43
COL7A1-202ENST00000422991 ZNF767PQ75MW2 155 aa12.37□□□□□ -0.43
COL7A1-202ENST00000422991 OVOL2Q9BRP0 275 aa12.37□□□□□ -0.43
COL7A1-202ENST00000422991 ZMAT4Q9H898 229 aa12.37□□□□□ -0.43
COL7A1-202ENST00000422991 VAX2Q9UIW0 290 aa12.37□□□□□ -0.43
COL7A1-202ENST00000422991 LENEPQ9Y5L5 61 aa12.37□□□□□ -0.43
COL7A1-202ENST00000422991 TRAV12-2A0A075B6T6 113 aa12.36□□□□□ -0.43
COL7A1-202ENST00000422991 FBLL1A6NHQ2 334 aaKnown RBP12.36□□□□□ -0.43
COL7A1-202ENST00000422991 KLLNB2CW77 178 aa12.36□□□□□ -0.43
COL7A1-202ENST00000422991 FLI1Q01543 452 aaPredicted RBP12.36□□□□□ -0.43
COL7A1-202ENST00000422991 KIR3DS1Q14943 382 aa12.36□□□□□ -0.43
COL7A1-202ENST00000422991 ZFAND2AQ8N6M9 145 aa12.36□□□□□ -0.43
COL7A1-202ENST00000422991 C11orf52Q96A22 123 aa12.36□□□□□ -0.43
COL7A1-202ENST00000422991 SGK494Q96LW2 274 aa12.36□□□□□ -0.43
COL7A1-202ENST00000422991 LINC00479Q96M42 142 aa12.36□□□□□ -0.43
COL7A1-202ENST00000422991 TRAV34A0A0B4J273 112 aa12.35□□□□□ -0.43
COL7A1-202ENST00000422991 AKR1C3P42330 323 aa12.35□□□□□ -0.43
COL7A1-202ENST00000422991 GFI1BQ5VTD9 330 aa12.35□□□□□ -0.43
COL7A1-202ENST00000422991 Q86TA4 180 aa12.35□□□□□ -0.43
COL7A1-202ENST00000422991 C2CD4CQ8TF44 421 aa12.35□□□□□ -0.43
COL7A1-202ENST00000422991 PSG8Q9UQ74 426 aa12.35□□□□□ -0.43
COL7A1-202ENST00000422991 KLF12Q9Y4X4 402 aa12.35□□□□□ -0.43
COL7A1-202ENST00000422991 RBFOX3A6NFN3 312 aa12.34□□□□□ -0.43
COL7A1-202ENST00000422991 J3KRW8 73 aa12.34□□□□□ -0.43
COL7A1-202ENST00000422991 PDE6DO43924 150 aa12.34□□□□□ -0.43
COL7A1-202ENST00000422991 RBMY1A1P0DJD3 496 aaKnown RBP12.34□□□□□ -0.43
COL7A1-202ENST00000422991 RBMY1CP0DJD4 496 aa12.34□□□□□ -0.43
COL7A1-202ENST00000422991 RBMY1FQ15415 496 aaKnown RBP12.34□□□□□ -0.43
COL7A1-202ENST00000422991 ZNF506Q5JVG8 444 aa12.34□□□□□ -0.43
COL7A1-202ENST00000422991 PRR9Q5T870 116 aa12.34□□□□□ -0.43
COL7A1-202ENST00000422991 ZNF705AQ6ZN79 300 aaPredicted RBP12.34□□□□□ -0.43
COL7A1-202ENST00000422991 C1orf158Q8N1D5 194 aa12.34□□□□□ -0.43
COL7A1-202ENST00000422991 TVP23CQ96ET8 276 aa12.34□□□□□ -0.43
COL7A1-202ENST00000422991 FMC1Q96HJ9 113 aa12.34□□□□□ -0.43
COL7A1-202ENST00000422991 FAM210AQ96ND0 272 aa12.34□□□□□ -0.43
COL7A1-202ENST00000422991 RARRES2Q99969 163 aa12.34□□□□□ -0.43
COL7A1-202ENST00000422991 C7orf71A4D174 169 aa12.33□□□□□ -0.44
COL7A1-202ENST00000422991 TOR2AQ5JU69 321 aa12.33□□□□□ -0.44
COL7A1-202ENST00000422991 PRNTQ86SH4 94 aa12.33□□□□□ -0.44
COL7A1-202ENST00000422991 C20orf144Q9BQM9 153 aa12.33□□□□□ -0.44
COL7A1-202ENST00000422991 GOLT1BQ9Y3E0 138 aa12.33□□□□□ -0.44
COL7A1-202ENST00000422991 TRBV6-1A0A0K0K1D8 114 aa12.32□□□□□ -0.44
COL7A1-202ENST00000422991 GPX1P07203 203 aa12.32□□□□□ -0.44
COL7A1-202ENST00000422991 RAB14P61106 215 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms