RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 K7EPK0 472 aa5.52□□□□□ -1.53
VIM-202ENST00000421459 CCSO14618 274 aa5.52□□□□□ -1.53
VIM-202ENST00000421459 ZNF324O75467 553 aaPredicted RBP5.52□□□□□ -1.53
VIM-202ENST00000421459 NXPH4O95158 308 aa5.52□□□□□ -1.53
VIM-202ENST00000421459 CXCL2P19875 107 aa5.52□□□□□ -1.53
VIM-202ENST00000421459 RNASE4P34096 147 aaKnown RBP5.52□□□□□ -1.53
VIM-202ENST00000421459 LEPP41159 167 aa5.52□□□□□ -1.53
VIM-202ENST00000421459 DAZ2Q13117 558 aaKnown RBP5.52□□□□□ -1.53
VIM-202ENST00000421459 IAH1Q2TAA2 248 aaPredicted RBP5.52□□□□□ -1.53
VIM-202ENST00000421459 PRR9Q5T870 116 aa5.52□□□□□ -1.53
VIM-202ENST00000421459 Q5VSD8 79 aa5.52□□□□□ -1.53
VIM-202ENST00000421459 C10orf113Q5VZT2 155 aa5.52□□□□□ -1.53
VIM-202ENST00000421459 MED28Q9H204 178 aa5.52□□□□□ -1.53
VIM-202ENST00000421459 MGAT4CQ9UBM8 478 aa5.52□□□□□ -1.53
VIM-202ENST00000421459 FUT9Q9Y231 359 aa5.52□□□□□ -1.53
VIM-202ENST00000421459 UBR4Q5T4S7 5183 aa5.51□□□□□ -1.53
VIM-202ENST00000421459 C7orf71A4D174 169 aa5.51□□□□□ -1.53
VIM-202ENST00000421459 FNDC10F2Z333 226 aa5.51□□□□□ -1.53
VIM-202ENST00000421459 PAX4O43316 350 aa5.51□□□□□ -1.53
VIM-202ENST00000421459 PFDN1O60925 122 aa5.51□□□□□ -1.53
VIM-202ENST00000421459 MBPP02686 304 aaPredicted RBP5.51□□□□□ -1.53
VIM-202ENST00000421459 LYPD5Q6UWN5 251 aa5.51□□□□□ -1.53
VIM-202ENST00000421459 ZNF546Q86UE3 836 aa5.51□□□□□ -1.53
VIM-202ENST00000421459 AKAP14Q86UN6 197 aa5.51□□□□□ -1.53
VIM-202ENST00000421459 C12orf45Q8N5I9 185 aaPredicted RBP5.51□□□□□ -1.53
VIM-202ENST00000421459 ST6GAL2Q96JF0 529 aa5.51□□□□□ -1.53
VIM-202ENST00000421459 PYGO2Q9BRQ0 406 aa5.51□□□□□ -1.53
VIM-202ENST00000421459 AGPAT4-IT1Q9H0P7 198 aa5.51□□□□□ -1.53
VIM-202ENST00000421459 DNAJC4Q9NNZ3 241 aa5.51□□□□□ -1.53
VIM-202ENST00000421459 MRPL16Q9NX20 251 aaKnown RBP5.51□□□□□ -1.53
VIM-202ENST00000421459 PGPEP1Q9NXJ5 209 aa5.51□□□□□ -1.53
VIM-202ENST00000421459 PXMP4Q9Y6I8 212 aa5.51□□□□□ -1.53
VIM-202ENST00000421459 SRRM2Q9UQ35 2752 aaKnown RBP5.5□□□□□ -1.53
VIM-202ENST00000421459 A0A087WTM6 91 aa5.5□□□□□ -1.53
VIM-202ENST00000421459 IGKV2-40A0A087WW87 121 aaPredicted RBP5.5□□□□□ -1.53
VIM-202ENST00000421459 FAM24AA6NFZ4 105 aa5.5□□□□□ -1.53
VIM-202ENST00000421459 SSNA1O43805 119 aa5.5□□□□□ -1.53
VIM-202ENST00000421459 SPINK4O60575 86 aa5.5□□□□□ -1.53
VIM-202ENST00000421459 TSC22D2O75157 780 aa5.5□□□□□ -1.53
VIM-202ENST00000421459 CST7O76096 145 aa5.5□□□□□ -1.53
VIM-202ENST00000421459 NDUFB4O95168 129 aa5.5□□□□□ -1.53
VIM-202ENST00000421459 IGKV2D-40P01614 121 aaPredicted RBP5.5□□□□□ -1.53
VIM-202ENST00000421459 PYYP10082 97 aa5.5□□□□□ -1.53
VIM-202ENST00000421459 CAMLGP49069 296 aa5.5□□□□□ -1.53
VIM-202ENST00000421459 PXDC1Q5TGL8 231 aa5.5□□□□□ -1.53
VIM-202ENST00000421459 S100A7AQ86SG5 101 aa5.5□□□□□ -1.53
VIM-202ENST00000421459 TCTE3Q8IZS6 198 aa5.5□□□□□ -1.53
VIM-202ENST00000421459 EXOC3-AS1Q8N2X6 119 aa5.5□□□□□ -1.53
VIM-202ENST00000421459 BLNKQ8WV28 456 aa5.5□□□□□ -1.53
VIM-202ENST00000421459 ASB13Q8WXK3 278 aa5.5□□□□□ -1.53
VIM-202ENST00000421459 FAM19A4Q96LR4 140 aa5.5□□□□□ -1.53
VIM-202ENST00000421459 C8orf49Q96NF6 230 aa5.5□□□□□ -1.53
VIM-202ENST00000421459 VGLL1Q99990 258 aa5.5□□□□□ -1.53
VIM-202ENST00000421459 LSM5Q9Y4Y9 91 aaKnown RBP5.5□□□□□ -1.53
VIM-202ENST00000421459 TRBV19A0A075B6N1 114 aa5.49□□□□□ -1.53
VIM-202ENST00000421459 KLLNB2CW77 178 aa5.49□□□□□ -1.53
VIM-202ENST00000421459 E5RGE8 158 aa5.49□□□□□ -1.53
VIM-202ENST00000421459 SLC25A5P05141 298 aaKnown RBP5.49□□□□□ -1.53
VIM-202ENST00000421459 GIPP09681 153 aaPredicted RBP5.49□□□□□ -1.53
VIM-202ENST00000421459 SFTA3P0C7M3 94 aa5.49□□□□□ -1.53
VIM-202ENST00000421459 TCL1AP56279 114 aa5.49□□□□□ -1.53
VIM-202ENST00000421459 H2BFSP57053 126 aa5.49□□□□□ -1.53
VIM-202ENST00000421459 TAS2R30P59541 319 aa5.49□□□□□ -1.53
VIM-202ENST00000421459 ERVFC1-1P60608 527 aa5.49□□□□□ -1.53
VIM-202ENST00000421459 FHL2Q14192 279 aa5.49□□□□□ -1.53
VIM-202ENST00000421459 GCSAMLQ5JQS6 135 aa5.49□□□□□ -1.53
VIM-202ENST00000421459 WFDC10BQ8IUB3 73 aa5.49□□□□□ -1.53
VIM-202ENST00000421459 EIF4E3Q8N5X7 224 aaKnown RBP5.49□□□□□ -1.53
VIM-202ENST00000421459 ODF3Q96PU9 254 aa5.49□□□□□ -1.53
VIM-202ENST00000421459 ICOSQ9Y6W8 199 aa5.49□□□□□ -1.53
VIM-202ENST00000421459 FAT3Q8TDW7 4589 aa5.49□□□□□ -1.53
VIM-202ENST00000421459 LRP1Q07954 4544 aaKnown RBP5.48□□□□□ -1.53
VIM-202ENST00000421459 FAM25EA8MYX2 175 aa5.48□□□□□ -1.53
VIM-202ENST00000421459 G3V3Q6 166 aa5.48□□□□□ -1.53
VIM-202ENST00000421459 EREGO14944 169 aa5.48□□□□□ -1.53
VIM-202ENST00000421459 GPX1P07203 203 aa5.48□□□□□ -1.53
VIM-202ENST00000421459 CRYBA4P53673 196 aa5.48□□□□□ -1.53
VIM-202ENST00000421459 IL15RAQ13261 267 aa5.48□□□□□ -1.53
VIM-202ENST00000421459 ANXA2RQ3ZCQ2 193 aa5.48□□□□□ -1.53
VIM-202ENST00000421459 FAM122CQ6P4D5 195 aa5.48□□□□□ -1.53
VIM-202ENST00000421459 Q6ZRG5 221 aa5.48□□□□□ -1.53
VIM-202ENST00000421459 ZFAND2AQ8N6M9 145 aa5.48□□□□□ -1.53
VIM-202ENST00000421459 ZNF680Q8NEM1 530 aa5.48□□□□□ -1.53
VIM-202ENST00000421459 FRZBQ92765 325 aa5.48□□□□□ -1.53
VIM-202ENST00000421459 C18orf15Q96N68 181 aa5.48□□□□□ -1.53
VIM-202ENST00000421459 GGACTQ9BVM4 153 aa5.48□□□□□ -1.53
VIM-202ENST00000421459 C11orf1Q9H5F2 150 aa5.48□□□□□ -1.53
VIM-202ENST00000421459 HHLA3Q9XRX5 114 aa5.48□□□□□ -1.53
VIM-202ENST00000421459 WDR83OSQ9Y284 106 aa5.48□□□□□ -1.53
VIM-202ENST00000421459 IGHV1OR15-1A0A075B7D0 117 aa5.47□□□□□ -1.53
VIM-202ENST00000421459 LOC100131303A0A0U1RQF7 123 aa5.47□□□□□ -1.53
VIM-202ENST00000421459 UBE2L5PA0A1B0GUS4 154 aa5.47□□□□□ -1.53
VIM-202ENST00000421459 IGSF23A1L1A6 192 aa5.47□□□□□ -1.53
VIM-202ENST00000421459 L7N2F9 121 aa5.47□□□□□ -1.53
VIM-202ENST00000421459 MPDU1O75352 247 aa5.47□□□□□ -1.53
VIM-202ENST00000421459 IFNA5P01569 189 aa5.47□□□□□ -1.53
VIM-202ENST00000421459 GCSHP23434 173 aa5.47□□□□□ -1.53
VIM-202ENST00000421459 CAV2P51636 162 aa5.47□□□□□ -1.53
VIM-202ENST00000421459 VAMP2P63027 116 aa5.47□□□□□ -1.53
VIM-202ENST00000421459 ICAM4Q14773 271 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms