RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 SLC25A5P05141 298 aaKnown RBP6.86□□□□□ -1.31
TNFAIP3-202ENST00000420009 HOXB5P09067 269 aa6.86□□□□□ -1.31
TNFAIP3-202ENST00000420009 RRAS2P62070 204 aaPredicted RBP6.86□□□□□ -1.31
TNFAIP3-202ENST00000420009 POLR2GP62487 172 aaKnown RBP eCLIP6.86□□□□□ -1.31
TNFAIP3-202ENST00000420009 SLAQ13239 276 aa6.86□□□□□ -1.31
TNFAIP3-202ENST00000420009 PPP1R1AQ13522 171 aa6.86□□□□□ -1.31
TNFAIP3-202ENST00000420009 OPCMLQ14982 345 aa6.86□□□□□ -1.31
TNFAIP3-202ENST00000420009 MRPL23Q16540 153 aaKnown RBP6.86□□□□□ -1.31
TNFAIP3-202ENST00000420009 IBA57Q5T440 356 aaKnown RBP6.86□□□□□ -1.31
TNFAIP3-202ENST00000420009 TMEM14EPQ6UXP3 125 aa6.86□□□□□ -1.31
TNFAIP3-202ENST00000420009 NEGR1Q7Z3B1 354 aa6.86□□□□□ -1.31
TNFAIP3-202ENST00000420009 ZNF546Q86UE3 836 aa6.86□□□□□ -1.31
TNFAIP3-202ENST00000420009 EIF4E3Q8N5X7 224 aaKnown RBP6.86□□□□□ -1.31
TNFAIP3-202ENST00000420009 FAM19A4Q96LR4 140 aa6.86□□□□□ -1.31
TNFAIP3-202ENST00000420009 VGLL1Q99990 258 aa6.86□□□□□ -1.31
TNFAIP3-202ENST00000420009 NPVFQ9HCQ7 196 aa6.86□□□□□ -1.31
TNFAIP3-202ENST00000420009 NOL3O60936 208 aaKnown RBP6.85□□□□□ -1.31
TNFAIP3-202ENST00000420009 EVI2AP22794 236 aa6.85□□□□□ -1.31
TNFAIP3-202ENST00000420009 CD300CQ08708 224 aa6.85□□□□□ -1.31
TNFAIP3-202ENST00000420009 BTN1A1Q13410 526 aa6.85□□□□□ -1.31
TNFAIP3-202ENST00000420009 FHL2Q14192 279 aa6.85□□□□□ -1.31
TNFAIP3-202ENST00000420009 TMEM37Q8WXS4 190 aa6.85□□□□□ -1.31
TNFAIP3-202ENST00000420009 C8orf49Q96NF6 230 aa6.85□□□□□ -1.31
TNFAIP3-202ENST00000420009 SOSTQ9BQB4 213 aa6.85□□□□□ -1.31
TNFAIP3-202ENST00000420009 MRPL16Q9NX20 251 aaKnown RBP6.85□□□□□ -1.31
TNFAIP3-202ENST00000420009 PSENENQ9NZ42 101 aa6.85□□□□□ -1.31
TNFAIP3-202ENST00000420009 FAM30AQ9NZY2 134 aa6.85□□□□□ -1.31
TNFAIP3-202ENST00000420009 CCDC59Q9P031 241 aaKnown RBP6.85□□□□□ -1.31
TNFAIP3-202ENST00000420009 HHLA3Q9XRX5 114 aa6.85□□□□□ -1.31
TNFAIP3-202ENST00000420009 GOSR2O14653 212 aa6.84□□□□□ -1.31
TNFAIP3-202ENST00000420009 AGPAT2O15120 278 aa6.84□□□□□ -1.31
TNFAIP3-202ENST00000420009 SSSCA1O60232 199 aa6.84□□□□□ -1.31
TNFAIP3-202ENST00000420009 COX7A2P2O60397 106 aa6.84□□□□□ -1.31
TNFAIP3-202ENST00000420009 PRAF2O60831 178 aa6.84□□□□□ -1.31
TNFAIP3-202ENST00000420009 ZNF253O75346 499 aa6.84□□□□□ -1.31
TNFAIP3-202ENST00000420009 C1QBP02746 253 aa6.84□□□□□ -1.31
TNFAIP3-202ENST00000420009 METTL15P1P0C7V9 234 aa6.84□□□□□ -1.31
TNFAIP3-202ENST00000420009 FAUP35544 74 aaKnown RBP6.84□□□□□ -1.31
TNFAIP3-202ENST00000420009 GUK1Q16774 197 aa6.84□□□□□ -1.31
TNFAIP3-202ENST00000420009 SERTAD4-AS1Q5TG53 156 aa6.84□□□□□ -1.31
TNFAIP3-202ENST00000420009 Q6ZSA8 131 aa6.84□□□□□ -1.31
TNFAIP3-202ENST00000420009 C10orf126Q8N4M7 172 aa6.84□□□□□ -1.31
TNFAIP3-202ENST00000420009 TRIM63Q969Q1 353 aa6.84□□□□□ -1.31
TNFAIP3-202ENST00000420009 MRPL53Q96EL3 112 aaKnown RBP6.84□□□□□ -1.31
TNFAIP3-202ENST00000420009 SMIM8Q96KF7 97 aa6.84□□□□□ -1.31
TNFAIP3-202ENST00000420009 MGAT4CQ9UBM8 478 aa6.84□□□□□ -1.31
TNFAIP3-202ENST00000420009 K7EQD1 137 aa6.83□□□□□ -1.32
TNFAIP3-202ENST00000420009 M0R3E3 92 aa6.83□□□□□ -1.32
TNFAIP3-202ENST00000420009 PLA2G1BP04054 148 aaKnown RBP6.83□□□□□ -1.32
TNFAIP3-202ENST00000420009 CRYGDP07320 174 aa6.83□□□□□ -1.32
TNFAIP3-202ENST00000420009 OR4E1P0C645 316 aa6.83□□□□□ -1.32
TNFAIP3-202ENST00000420009 CRISP2P16562 243 aa6.83□□□□□ -1.32
TNFAIP3-202ENST00000420009 ERCC8Q13216 396 aa6.83□□□□□ -1.32
TNFAIP3-202ENST00000420009 Q8N814 137 aa6.83□□□□□ -1.32
TNFAIP3-202ENST00000420009 OR10P1Q8NGE3 313 aa6.83□□□□□ -1.32
TNFAIP3-202ENST00000420009 DYNC2LI1Q8TCX1 351 aa6.83□□□□□ -1.32
TNFAIP3-202ENST00000420009 DEFB104AQ8WTQ1 72 aa6.83□□□□□ -1.32
TNFAIP3-202ENST00000420009 MGST2Q99735 147 aa6.83□□□□□ -1.32
TNFAIP3-202ENST00000420009 SLC25A21Q9BQT8 299 aaPredicted RBP6.83□□□□□ -1.32
TNFAIP3-202ENST00000420009 TP53TG3Q9ULZ0 132 aa6.83□□□□□ -1.32
TNFAIP3-202ENST00000420009 TSC22D2O75157 780 aa6.82□□□□□ -1.32
TNFAIP3-202ENST00000420009 MPDU1O75352 247 aa6.82□□□□□ -1.32
TNFAIP3-202ENST00000420009 SRIP30626 198 aa6.82□□□□□ -1.32
TNFAIP3-202ENST00000420009 ARL16Q0P5N6 197 aa6.82□□□□□ -1.32
TNFAIP3-202ENST00000420009 C10orf113Q5VZT2 155 aa6.82□□□□□ -1.32
TNFAIP3-202ENST00000420009 IQCF2Q8IXL9 164 aa6.82□□□□□ -1.32
TNFAIP3-202ENST00000420009 ZFAND2AQ8N6M9 145 aa6.82□□□□□ -1.32
TNFAIP3-202ENST00000420009 SYT8Q8NBV8 401 aa6.82□□□□□ -1.32
TNFAIP3-202ENST00000420009 GGACTQ9BVM4 153 aa6.82□□□□□ -1.32
TNFAIP3-202ENST00000420009 MRPL32Q9BYC8 188 aaKnown RBP6.82□□□□□ -1.32
TNFAIP3-202ENST00000420009 TRAV5A0A0B4J249 113 aa6.81□□□□□ -1.32
TNFAIP3-202ENST00000420009 E5RGE8 158 aa6.81□□□□□ -1.32
TNFAIP3-202ENST00000420009 PSCAO43653 123 aa6.81□□□□□ -1.32
TNFAIP3-202ENST00000420009 NMBP08949 121 aa6.81□□□□□ -1.32
TNFAIP3-202ENST00000420009 RNASE4P34096 147 aaKnown RBP6.81□□□□□ -1.32
TNFAIP3-202ENST00000420009 TAS2R30P59541 319 aa6.81□□□□□ -1.32
TNFAIP3-202ENST00000420009 AP3S2P59780 193 aa6.81□□□□□ -1.32
TNFAIP3-202ENST00000420009 UBE2MP61081 183 aaKnown RBP6.81□□□□□ -1.32
TNFAIP3-202ENST00000420009 PRR9Q5T870 116 aa6.81□□□□□ -1.32
TNFAIP3-202ENST00000420009 Q6ZQT7 251 aa6.81□□□□□ -1.32
TNFAIP3-202ENST00000420009 MCFD2Q8NI22 146 aa6.81□□□□□ -1.32
TNFAIP3-202ENST00000420009 LINC00477Q96M19 166 aa6.81□□□□□ -1.32
TNFAIP3-202ENST00000420009 AGPAT4-IT1Q9H0P7 198 aa6.81□□□□□ -1.32
TNFAIP3-202ENST00000420009 TRBV19A0A075B6N1 114 aa6.8□□□□□ -1.32
TNFAIP3-202ENST00000420009 IGHV1OR15-1A0A075B7D0 117 aa6.8□□□□□ -1.32
TNFAIP3-202ENST00000420009 TRGV4A0A0C4DH28 118 aa6.8□□□□□ -1.32
TNFAIP3-202ENST00000420009 C9orf170A2RU37 121 aa6.8□□□□□ -1.32
TNFAIP3-202ENST00000420009 FABP12A6NFH5 140 aa6.8□□□□□ -1.32
TNFAIP3-202ENST00000420009 RGS13O14921 159 aa6.8□□□□□ -1.32
TNFAIP3-202ENST00000420009 NDUFB4O95168 129 aa6.8□□□□□ -1.32
TNFAIP3-202ENST00000420009 ORM1P02763 201 aa6.8□□□□□ -1.32
TNFAIP3-202ENST00000420009 GYPEP15421 78 aa6.8□□□□□ -1.32
TNFAIP3-202ENST00000420009 TNFSF8P32971 234 aa6.8□□□□□ -1.32
TNFAIP3-202ENST00000420009 ZNF415Q09FC8 603 aa6.8□□□□□ -1.32
TNFAIP3-202ENST00000420009 C9orf47Q6ZRZ4 202 aa6.8□□□□□ -1.32
TNFAIP3-202ENST00000420009 TOMM5Q8N4H5 51 aa6.8□□□□□ -1.32
TNFAIP3-202ENST00000420009 OR10G4Q8NGN3 311 aa6.8□□□□□ -1.32
TNFAIP3-202ENST00000420009 PCNPQ8WW12 178 aaKnown RBP6.8□□□□□ -1.32
TNFAIP3-202ENST00000420009 DEDD2Q8WXF8 326 aa6.8□□□□□ -1.32
TNFAIP3-202ENST00000420009 ZNF479Q96JC4 524 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 183 ms