RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 KIR3DS1Q14943 382 aa12.86□□□□□ -0.35
VCP-202ENST00000417448 ZNF726P1Q15940 193 aa12.86□□□□□ -0.35
VCP-202ENST00000417448 KANTRA0A1W2PQU2 76 aa12.85□□□□□ -0.35
VCP-202ENST00000417448 A8MTW9 85 aa12.85□□□□□ -0.35
VCP-202ENST00000417448 PFDN1O60925 122 aa12.85□□□□□ -0.35
VCP-202ENST00000417448 ZNF253O75346 499 aa12.85□□□□□ -0.35
VCP-202ENST00000417448 PRM2P04554 102 aa12.85□□□□□ -0.35
VCP-202ENST00000417448 LGALS9BQ3B8N2 356 aa12.85□□□□□ -0.35
VCP-202ENST00000417448 BAP18Q8IXM2 172 aa12.85□□□□□ -0.35
VCP-202ENST00000417448 PPP1R14DQ9NXH3 145 aa12.85□□□□□ -0.35
VCP-202ENST00000417448 X6R8D5 127 aa12.85□□□□□ -0.35
VCP-202ENST00000417448 IGKV2-40A0A087WW87 121 aaPredicted RBP12.84□□□□□ -0.35
VCP-202ENST00000417448 J3KRW8 73 aa12.84□□□□□ -0.35
VCP-202ENST00000417448 IGKV2D-40P01614 121 aaPredicted RBP12.84□□□□□ -0.35
VCP-202ENST00000417448 MBP02144 154 aa12.84□□□□□ -0.35
VCP-202ENST00000417448 C1QBP02746 253 aa12.84□□□□□ -0.35
VCP-202ENST00000417448 RBMY1A1P0DJD3 496 aaKnown RBP12.84□□□□□ -0.35
VCP-202ENST00000417448 RBMY1CP0DJD4 496 aa12.84□□□□□ -0.35
VCP-202ENST00000417448 PDE6HQ13956 83 aa12.84□□□□□ -0.35
VCP-202ENST00000417448 RBMY1FQ15415 496 aaKnown RBP12.84□□□□□ -0.35
VCP-202ENST00000417448 OR10J6PQ8NGY7 276 aa12.84□□□□□ -0.35
VCP-202ENST00000417448 HYLS1Q96M11 299 aa12.84□□□□□ -0.35
VCP-202ENST00000417448 CLUHP3Q96NS8 147 aa12.84□□□□□ -0.35
VCP-202ENST00000417448 ACTR3CQ9C0K3 210 aaPredicted RBP12.84□□□□□ -0.35
VCP-202ENST00000417448 Q9H3A6 140 aa12.84□□□□□ -0.35
VCP-202ENST00000417448 TMPRSS5Q9H3S3 457 aa12.84□□□□□ -0.35
VCP-202ENST00000417448 TRAV10A0A0B4J240 114 aa12.83□□□□□ -0.36
VCP-202ENST00000417448 CDK2AP2O75956 126 aa12.83□□□□□ -0.36
VCP-202ENST00000417448 STAG3L2P0CL84 134 aa12.83□□□□□ -0.36
VCP-202ENST00000417448 STAG3L3P0CL85 134 aa12.83□□□□□ -0.36
VCP-202ENST00000417448 CT45A10P0DMU9 189 aa12.83□□□□□ -0.36
VCP-202ENST00000417448 FHITP49789 147 aa12.83□□□□□ -0.36
VCP-202ENST00000417448 FGF8P55075 233 aaPredicted RBP12.83□□□□□ -0.36
VCP-202ENST00000417448 AKR1C8PQ5T2L2 129 aa12.83□□□□□ -0.36
VCP-202ENST00000417448 IQCF2Q8IXL9 164 aa12.83□□□□□ -0.36
VCP-202ENST00000417448 C1orf158Q8N1D5 194 aa12.83□□□□□ -0.36
VCP-202ENST00000417448 AAMDCQ9H7C9 122 aa12.83□□□□□ -0.36
VCP-202ENST00000417448 RPH3ALQ9UNE2 315 aa12.83□□□□□ -0.36
VCP-202ENST00000417448 IGHV4-28A0A0C4DH34 117 aa12.82□□□□□ -0.36
VCP-202ENST00000417448 CRXO43186 299 aaPredicted RBP12.82□□□□□ -0.36
VCP-202ENST00000417448 AMBPP02760 352 aa12.82□□□□□ -0.36
VCP-202ENST00000417448 GCHFRP30047 84 aa12.82□□□□□ -0.36
VCP-202ENST00000417448 PQLC2Q6ZP29 291 aa12.82□□□□□ -0.36
VCP-202ENST00000417448 Q6ZR54 194 aa12.82□□□□□ -0.36
VCP-202ENST00000417448 VGLL1Q99990 258 aa12.82□□□□□ -0.36
VCP-202ENST00000417448 C1QTNF4Q9BXJ3 329 aa12.82□□□□□ -0.36
VCP-202ENST00000417448 AGPAT4-IT1Q9H0P7 198 aa12.82□□□□□ -0.36
VCP-202ENST00000417448 DMBT1Q9UGM3 2413 aaPredicted RBP12.81□□□□□ -0.36
VCP-202ENST00000417448 PGPA6NDG6 321 aa12.81□□□□□ -0.36
VCP-202ENST00000417448 BOLA2-SMG1P6H3BVE0 249 aa12.81□□□□□ -0.36
VCP-202ENST00000417448 P0DMU3 169 aa12.81□□□□□ -0.36
VCP-202ENST00000417448 FAM231AP0DMU4 169 aa12.81□□□□□ -0.36
VCP-202ENST00000417448 FAM231CP0DMU5 169 aa12.81□□□□□ -0.36
VCP-202ENST00000417448 NKX2-5P52952 324 aaPredicted RBP12.81□□□□□ -0.36
VCP-202ENST00000417448 PRELID1Q9Y255 219 aa12.81□□□□□ -0.36
VCP-202ENST00000417448 ZNF705EA8MWA4 302 aaPredicted RBP12.8□□□□□ -0.36
VCP-202ENST00000417448 NPIPB6E9PJ23 425 aa12.8□□□□□ -0.36
VCP-202ENST00000417448 GNG5P63218 68 aa12.8□□□□□ -0.36
VCP-202ENST00000417448 TMED6Q8WW62 240 aa12.8□□□□□ -0.36
VCP-202ENST00000417448 MRPL53Q96EL3 112 aaKnown RBP12.8□□□□□ -0.36
VCP-202ENST00000417448 IGLV2-18A0A075B6J9 118 aa12.79□□□□□ -0.36
VCP-202ENST00000417448 CTXND1A0A1B0GTU2 59 aa12.79□□□□□ -0.36
VCP-202ENST00000417448 A0A1B0GV50 99 aa12.79□□□□□ -0.36
VCP-202ENST00000417448 ZNF705AQ6ZN79 300 aaPredicted RBP12.79□□□□□ -0.36
VCP-202ENST00000417448 Q8N1X5 172 aa12.79□□□□□ -0.36
VCP-202ENST00000417448 IGF2BP2-AS1Q96M15 143 aa12.79□□□□□ -0.36
VCP-202ENST00000417448 ZNF705GA8MUZ8 300 aaPredicted RBP12.78□□□□□ -0.36
VCP-202ENST00000417448 CXorf1O96002 111 aa12.78□□□□□ -0.36
VCP-202ENST00000417448 EMP1P54849 157 aa12.78□□□□□ -0.36
VCP-202ENST00000417448 ZFP69Q49AA0 526 aa12.78□□□□□ -0.36
VCP-202ENST00000417448 C9orf62Q8N4C0 152 aa12.78□□□□□ -0.36
VCP-202ENST00000417448 Q8TAT8 98 aa12.78□□□□□ -0.36
VCP-202ENST00000417448 FAM213BQ8TBF2 198 aa12.78□□□□□ -0.36
VCP-202ENST00000417448 TMEM208Q9BTX3 173 aa12.78□□□□□ -0.36
VCP-202ENST00000417448 DNAH5Q8TE73 4624 aa12.77□□□□□ -0.36
VCP-202ENST00000417448 NACAE9PAV3 2078 aa12.77□□□□□ -0.36
VCP-202ENST00000417448 C16orf90A8MZG2 172 aa12.77□□□□□ -0.37
VCP-202ENST00000417448 INSP01308 110 aa12.77□□□□□ -0.37
VCP-202ENST00000417448 SEC11BP0C7V7 166 aa12.77□□□□□ -0.37
VCP-202ENST00000417448 UBE2G2P60604 165 aa12.77□□□□□ -0.37
VCP-202ENST00000417448 ZNF767PQ75MW2 155 aa12.77□□□□□ -0.37
VCP-202ENST00000417448 LYPD1Q8N2G4 141 aa12.77□□□□□ -0.37
VCP-202ENST00000417448 SGK494Q96LW2 274 aa12.77□□□□□ -0.37
VCP-202ENST00000417448 OTORQ9NRC9 128 aa12.77□□□□□ -0.37
VCP-202ENST00000417448 CELA1Q9UNI1 258 aa12.77□□□□□ -0.37
VCP-202ENST00000417448 GOLT1BQ9Y3E0 138 aa12.77□□□□□ -0.37
VCP-202ENST00000417448 MAP1LC3B2A6NCE7 125 aa12.76□□□□□ -0.37
VCP-202ENST00000417448 DIRC3C9JPN6 131 aa12.76□□□□□ -0.37
VCP-202ENST00000417448 SLC25A5P05141 298 aaKnown RBP12.76□□□□□ -0.37
VCP-202ENST00000417448 TPT1P13693 172 aaKnown RBP12.76□□□□□ -0.37
VCP-202ENST00000417448 MIFP14174 115 aa12.76□□□□□ -0.37
VCP-202ENST00000417448 HTN1P15515 57 aa12.76□□□□□ -0.37
VCP-202ENST00000417448 CDKN1BP46527 198 aa12.76□□□□□ -0.37
VCP-202ENST00000417448 CSN1S1P47710 185 aa12.76□□□□□ -0.37
VCP-202ENST00000417448 GFI1BQ5VTD9 330 aa12.76□□□□□ -0.37
VCP-202ENST00000417448 Q6ZQT7 251 aa12.76□□□□□ -0.37
VCP-202ENST00000417448 SUN5Q8TC36 379 aa12.76□□□□□ -0.37
VCP-202ENST00000417448 MAP1LC3BQ9GZQ8 125 aa12.76□□□□□ -0.37
VCP-202ENST00000417448 BOLA1Q9Y3E2 137 aa12.76□□□□□ -0.37
VCP-202ENST00000417448 YTHDF2Q9Y5A9 579 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms