RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 LINC00477Q96M19 166 aa9.97□□□□□ -0.81
PAF1-202ENST00000416728 TMEM14CQ9P0S9 112 aa9.97□□□□□ -0.81
PAF1-202ENST00000416728 TIMM9Q9Y5J7 89 aa9.97□□□□□ -0.81
PAF1-202ENST00000416728 LRP1BQ9NZR2 4599 aa9.96□□□□□ -0.82
PAF1-202ENST00000416728 TRGV1A0A0A0MS02 117 aa9.96□□□□□ -0.82
PAF1-202ENST00000416728 IGSF23A1L1A6 192 aa9.96□□□□□ -0.82
PAF1-202ENST00000416728 KLLNB2CW77 178 aa9.96□□□□□ -0.82
PAF1-202ENST00000416728 FGF7P21781 194 aa9.96□□□□□ -0.82
PAF1-202ENST00000416728 PDE6HQ13956 83 aa9.96□□□□□ -0.82
PAF1-202ENST00000416728 EIF4E3Q8N5X7 224 aaKnown RBP9.96□□□□□ -0.82
PAF1-202ENST00000416728 TMEM252Q8N6L7 170 aa9.96□□□□□ -0.82
PAF1-202ENST00000416728 C11orf72Q8NBR9 251 aa9.96□□□□□ -0.82
PAF1-202ENST00000416728 CHAC2Q8WUX2 184 aa9.96□□□□□ -0.82
PAF1-202ENST00000416728 VSIG2Q96IQ7 327 aa9.96□□□□□ -0.82
PAF1-202ENST00000416728 C18orf15Q96N68 181 aa9.96□□□□□ -0.82
PAF1-202ENST00000416728 FUT9Q9Y231 359 aa9.96□□□□□ -0.82
PAF1-202ENST00000416728 A0A096LPF7 62 aa9.95□□□□□ -0.82
PAF1-202ENST00000416728 ZNF324O75467 553 aaPredicted RBP9.95□□□□□ -0.82
PAF1-202ENST00000416728 NDUFB4O95168 129 aa9.95□□□□□ -0.82
PAF1-202ENST00000416728 PYYP10082 97 aa9.95□□□□□ -0.82
PAF1-202ENST00000416728 RNASE4P34096 147 aaKnown RBP9.95□□□□□ -0.82
PAF1-202ENST00000416728 CD300CQ08708 224 aa9.95□□□□□ -0.82
PAF1-202ENST00000416728 BTN1A1Q13410 526 aa9.95□□□□□ -0.82
PAF1-202ENST00000416728 RAB32Q13637 225 aa9.95□□□□□ -0.82
PAF1-202ENST00000416728 ANXA2RQ3ZCQ2 193 aa9.95□□□□□ -0.82
PAF1-202ENST00000416728 BLNKQ8WV28 456 aa9.95□□□□□ -0.82
PAF1-202ENST00000416728 FAM19A4Q96LR4 140 aa9.95□□□□□ -0.82
PAF1-202ENST00000416728 LINC00467Q9BRT7 94 aa9.95□□□□□ -0.82
PAF1-202ENST00000416728 AGPAT4-IT1Q9H0P7 198 aa9.95□□□□□ -0.82
PAF1-202ENST00000416728 AAMDCQ9H7C9 122 aa9.95□□□□□ -0.82
PAF1-202ENST00000416728 MPDU1O75352 247 aa9.94□□□□□ -0.82
PAF1-202ENST00000416728 GPX1P07203 203 aa9.94□□□□□ -0.82
PAF1-202ENST00000416728 KRTAP10-2P60368 255 aa9.94□□□□□ -0.82
PAF1-202ENST00000416728 ATP6V1FQ16864 119 aa9.94□□□□□ -0.82
PAF1-202ENST00000416728 Q8N1X5 172 aa9.94□□□□□ -0.82
PAF1-202ENST00000416728 EXOC3-AS1Q8N2X6 119 aa9.94□□□□□ -0.82
PAF1-202ENST00000416728 GPN1Q9HCN4 374 aaPredicted RBP9.94□□□□□ -0.82
PAF1-202ENST00000416728 KLF12Q9Y4X4 402 aa9.94□□□□□ -0.82
PAF1-202ENST00000416728 H2AFB2P0C5Z0 115 aa9.93□□□□□ -0.82
PAF1-202ENST00000416728 CRISP2P16562 243 aa9.93□□□□□ -0.82
PAF1-202ENST00000416728 TCL1AP56279 114 aa9.93□□□□□ -0.82
PAF1-202ENST00000416728 LINC00315P59091 139 aa9.93□□□□□ -0.82
PAF1-202ENST00000416728 IL15RAQ13261 267 aa9.93□□□□□ -0.82
PAF1-202ENST00000416728 ICAM4Q14773 271 aa9.93□□□□□ -0.82
PAF1-202ENST00000416728 GCSAMLQ5JQS6 135 aa9.93□□□□□ -0.82
PAF1-202ENST00000416728 IBA57Q5T440 356 aaKnown RBP9.93□□□□□ -0.82
PAF1-202ENST00000416728 TMEM78Q5T7P6 136 aa9.93□□□□□ -0.82
PAF1-202ENST00000416728 C9orf47Q6ZRZ4 202 aa9.93□□□□□ -0.82
PAF1-202ENST00000416728 NPCDR1Q9BY65 106 aa9.93□□□□□ -0.82
PAF1-202ENST00000416728 IGKV2-40A0A087WW87 121 aaPredicted RBP9.92□□□□□ -0.82
PAF1-202ENST00000416728 RGS13O14921 159 aa9.92□□□□□ -0.82
PAF1-202ENST00000416728 SIVA1O15304 175 aa9.92□□□□□ -0.82
PAF1-202ENST00000416728 SPINK4O60575 86 aa9.92□□□□□ -0.82
PAF1-202ENST00000416728 IGKV2D-40P01614 121 aaPredicted RBP9.92□□□□□ -0.82
PAF1-202ENST00000416728 NMBP08949 121 aa9.92□□□□□ -0.82
PAF1-202ENST00000416728 FAM122CQ6P4D5 195 aa9.92□□□□□ -0.82
PAF1-202ENST00000416728 SCRT2Q9NQ03 307 aa9.92□□□□□ -0.82
PAF1-202ENST00000416728 ICOSQ9Y6W8 199 aa9.92□□□□□ -0.82
PAF1-202ENST00000416728 PAX4O43316 350 aa9.91□□□□□ -0.82
PAF1-202ENST00000416728 IGHV3-53P01767 116 aa9.91□□□□□ -0.82
PAF1-202ENST00000416728 ZFAND2AQ8N6M9 145 aa9.91□□□□□ -0.82
PAF1-202ENST00000416728 THAP6Q8TBB0 222 aa9.91□□□□□ -0.82
PAF1-202ENST00000416728 ST6GAL2Q96JF0 529 aa9.91□□□□□ -0.82
PAF1-202ENST00000416728 ARPC5LQ9BPX5 153 aa9.91□□□□□ -0.82
PAF1-202ENST00000416728 SLC25A2Q9BXI2 301 aa9.91□□□□□ -0.82
PAF1-202ENST00000416728 IGHV1OR15-1A0A075B7D0 117 aa9.9□□□□□ -0.82
PAF1-202ENST00000416728 FAM240BA0A1B0GVZ2 78 aa9.9□□□□□ -0.82
PAF1-202ENST00000416728 NXPH4O95158 308 aa9.9□□□□□ -0.82
PAF1-202ENST00000416728 NBEAP1P0C6P0 100 aa9.9□□□□□ -0.82
PAF1-202ENST00000416728 VGLL1Q99990 258 aa9.9□□□□□ -0.82
PAF1-202ENST00000416728 CCDC32Q9BV29 185 aa9.9□□□□□ -0.82
PAF1-202ENST00000416728 MRPL16Q9NX20 251 aaKnown RBP9.9□□□□□ -0.82
PAF1-202ENST00000416728 PRO0255Q9UI72 69 aa9.9□□□□□ -0.82
PAF1-202ENST00000416728 TP53TG3Q9ULZ0 132 aa9.9□□□□□ -0.82
PAF1-202ENST00000416728 SLAQ13239 276 aa9.89□□□□□ -0.83
PAF1-202ENST00000416728 PRR9Q5T870 116 aa9.89□□□□□ -0.83
PAF1-202ENST00000416728 MIR17HGQ75NE6 70 aa9.89□□□□□ -0.83
PAF1-202ENST00000416728 OR5C1Q8NGR4 320 aa9.89□□□□□ -0.83
PAF1-202ENST00000416728 FAM167A-AS1Q96KT0 104 aa9.89□□□□□ -0.83
PAF1-202ENST00000416728 OR51M1Q9H341 326 aa9.89□□□□□ -0.83
PAF1-202ENST00000416728 ZNF492Q9P255 531 aa9.89□□□□□ -0.83
PAF1-202ENST00000416728 ZNF138P52744 262 aa9.88□□□□□ -0.83
PAF1-202ENST00000416728 NHLH2Q02577 135 aa9.88□□□□□ -0.83
PAF1-202ENST00000416728 ZNF415Q09FC8 603 aa9.88□□□□□ -0.83
PAF1-202ENST00000416728 MZT2BQ6NZ67 158 aa9.88□□□□□ -0.83
PAF1-202ENST00000416728 Q6ZRN7 208 aaPredicted RBP9.88□□□□□ -0.83
PAF1-202ENST00000416728 SLC25A31Q9H0C2 315 aa9.88□□□□□ -0.83
PAF1-202ENST00000416728 KCNIP2Q9NS61 270 aa9.88□□□□□ -0.83
PAF1-202ENST00000416728 TRBV7-9A0A0J9YWB2 115 aa9.88□□□□□ -0.83
PAF1-202ENST00000416728 OR10J4P0C629 311 aa9.88□□□□□ -0.83
PAF1-202ENST00000416728 MRPL23Q16540 153 aaKnown RBP9.88□□□□□ -0.83
PAF1-202ENST00000416728 Q6ZQT7 251 aa9.88□□□□□ -0.83
PAF1-202ENST00000416728 Q8TAT8 98 aa9.88□□□□□ -0.83
PAF1-202ENST00000416728 C8orf49Q96NF6 230 aa9.88□□□□□ -0.83
PAF1-202ENST00000416728 PAXXQ9BUH6 204 aa9.88□□□□□ -0.83
PAF1-202ENST00000416728 MRPL32Q9BYC8 188 aaKnown RBP9.88□□□□□ -0.83
PAF1-202ENST00000416728 NDUFA13Q9P0J0 144 aa9.88□□□□□ -0.83
PAF1-202ENST00000416728 HHLA3Q9XRX5 114 aa9.88□□□□□ -0.83
PAF1-202ENST00000416728 DNAH5Q8TE73 4624 aa9.87□□□□□ -0.83
PAF1-202ENST00000416728 APOBP04114 4563 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms