RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 TP73-AS1Q9UF72 201 aa10.39□□□□□ -0.75
SCN1B-202ENST00000415950 RASL11AQ6T310 242 aa10.38□□□□□ -0.75
SCN1B-202ENST00000415950 SPXQ9BT56 116 aa10.38□□□□□ -0.75
SCN1B-202ENST00000415950 LY96Q9Y6Y9 160 aa10.38□□□□□ -0.75
SCN1B-202ENST00000415950 TRAV41A0A0B4J266 112 aa10.38□□□□□ -0.75
SCN1B-202ENST00000415950 TMEM178BH3BS89 294 aa10.38□□□□□ -0.75
SCN1B-202ENST00000415950 WT1-ASQ06250 92 aa10.38□□□□□ -0.75
SCN1B-202ENST00000415950 CRIP3Q6Q6R5 217 aa10.38□□□□□ -0.75
SCN1B-202ENST00000415950 THBDP07204 575 aa10.37□□□□□ -0.75
SCN1B-202ENST00000415950 HTTP42858 3142 aa10.37□□□□□ -0.75
SCN1B-202ENST00000415950 KIR2DL5BA0A0G2JN68 375 aa10.37□□□□□ -0.75
SCN1B-202ENST00000415950 KIR2DL5BA0A0G2JPC4 375 aa10.37□□□□□ -0.75
SCN1B-202ENST00000415950 TMEM238C9JI98 176 aa10.37□□□□□ -0.75
SCN1B-202ENST00000415950 C5orf64Q2M2E5 130 aa10.37□□□□□ -0.75
SCN1B-202ENST00000415950 KIR2DL5AQ8N109 375 aa10.37□□□□□ -0.75
SCN1B-202ENST00000415950 TMEM14BQ9NUH8 114 aa10.37□□□□□ -0.75
SCN1B-202ENST00000415950 PLSCR4Q9NRQ2 329 aa10.37□□□□□ -0.75
SCN1B-202ENST00000415950 TRAV13-1A0A0B4J241 112 aa10.37□□□□□ -0.75
SCN1B-202ENST00000415950 Q86TA4 180 aa10.37□□□□□ -0.75
SCN1B-202ENST00000415950 PHLDA1Q8WV24 401 aaPredicted RBP10.37□□□□□ -0.75
SCN1B-202ENST00000415950 GAFA1Q96PS6 74 aa10.37□□□□□ -0.75
SCN1B-202ENST00000415950 ADARB2-AS1A8MUL3 147 aa10.36□□□□□ -0.75
SCN1B-202ENST00000415950 OVOL1O14753 267 aa10.36□□□□□ -0.75
SCN1B-202ENST00000415950 VMO1Q7Z5L0 202 aa10.36□□□□□ -0.75
SCN1B-202ENST00000415950 SPRNQ5BIV9 151 aa10.36□□□□□ -0.75
SCN1B-202ENST00000415950 MDS2Q8NDY4 140 aa10.36□□□□□ -0.75
SCN1B-202ENST00000415950 YAE1D1Q9NRH1 226 aa10.36□□□□□ -0.75
SCN1B-202ENST00000415950 IGHV1-24A0A0C4DH33 117 aa10.36□□□□□ -0.75
SCN1B-202ENST00000415950 KNCNA6PVL3 124 aa10.36□□□□□ -0.75
SCN1B-202ENST00000415950 TOMM40O96008 361 aa10.36□□□□□ -0.75
SCN1B-202ENST00000415950 SLC25A20O43772 301 aa10.36□□□□□ -0.75
SCN1B-202ENST00000415950 DUSP14O95147 198 aaKnown RBP10.36□□□□□ -0.75
SCN1B-202ENST00000415950 TNFRSF6BO95407 300 aa10.36□□□□□ -0.75
SCN1B-202ENST00000415950 HIVEP3Q5T1R4 2406 aa10.35□□□□□ -0.75
SCN1B-202ENST00000415950 C15orf65H3BRN8 121 aa10.35□□□□□ -0.75
SCN1B-202ENST00000415950 K7EMI3 77 aa10.35□□□□□ -0.75
SCN1B-202ENST00000415950 WISP2O76076 250 aa10.35□□□□□ -0.75
SCN1B-202ENST00000415950 CRPP02741 224 aa10.35□□□□□ -0.75
SCN1B-202ENST00000415950 CD59P13987 128 aa10.35□□□□□ -0.75
SCN1B-202ENST00000415950 LY6DQ14210 128 aa10.35□□□□□ -0.75
SCN1B-202ENST00000415950 DPH3P1Q9H4G8 78 aa10.35□□□□□ -0.75
SCN1B-202ENST00000415950 TNFRSF14Q92956 283 aa10.35□□□□□ -0.75
SCN1B-202ENST00000415950 JPT2Q9H910 190 aa10.35□□□□□ -0.75
SCN1B-202ENST00000415950 H3BUX3 64 aa10.34□□□□□ -0.75
SCN1B-202ENST00000415950 MORN3Q6PF18 240 aaPredicted RBP10.34□□□□□ -0.75
SCN1B-202ENST00000415950 UBE2E2Q96LR5 201 aa10.34□□□□□ -0.75
SCN1B-202ENST00000415950 CDH23Q9H251 3354 aa10.34□□□□□ -0.75
SCN1B-202ENST00000415950 TMEM75Q8N9X5 138 aa10.34□□□□□ -0.75
SCN1B-202ENST00000415950 HIVEP2P31629 2446 aa10.34□□□□□ -0.75
SCN1B-202ENST00000415950 TRGV1A0A0A0MS02 117 aa10.34□□□□□ -0.75
SCN1B-202ENST00000415950 VCYO14598 125 aa10.34□□□□□ -0.75
SCN1B-202ENST00000415950 TMEM86BQ8N661 226 aa10.34□□□□□ -0.75
SCN1B-202ENST00000415950 C17orf77Q96MU5 243 aa10.34□□□□□ -0.75
SCN1B-202ENST00000415950 TSSC4Q9Y5U2 329 aaPredicted RBP10.34□□□□□ -0.75
SCN1B-202ENST00000415950 ZNF415Q09FC8 603 aa10.34□□□□□ -0.75
SCN1B-202ENST00000415950 C17orf58Q2M2W7 97 aa10.34□□□□□ -0.75
SCN1B-202ENST00000415950 Q8NFD4 153 aa10.34□□□□□ -0.75
SCN1B-202ENST00000415950 PRSS22Q9GZN4 317 aa10.34□□□□□ -0.75
SCN1B-202ENST00000415950 AMTNQ6UX39 209 aa10.33□□□□□ -0.76
SCN1B-202ENST00000415950 C8orf49Q96NF6 230 aa10.33□□□□□ -0.76
SCN1B-202ENST00000415950 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.33□□□□□ -0.76
SCN1B-202ENST00000415950 IGLV2-14P01704 120 aa10.33□□□□□ -0.76
SCN1B-202ENST00000415950 PRR20EP86478 221 aa10.33□□□□□ -0.76
SCN1B-202ENST00000415950 PRR20CP86479 221 aa10.33□□□□□ -0.76
SCN1B-202ENST00000415950 PRR20DP86480 221 aa10.33□□□□□ -0.76
SCN1B-202ENST00000415950 PRR20BP86481 221 aa10.33□□□□□ -0.76
SCN1B-202ENST00000415950 PRR20AP86496 221 aa10.33□□□□□ -0.76
SCN1B-202ENST00000415950 S100A7L2Q5SY68 101 aa10.33□□□□□ -0.76
SCN1B-202ENST00000415950 ZNF295-AS1Q8N0V1 137 aa10.33□□□□□ -0.76
SCN1B-202ENST00000415950 BUB1B-PAK6H3BSN5 160 aa10.33□□□□□ -0.76
SCN1B-202ENST00000415950 EDA2RQ9HAV5 297 aa10.33□□□□□ -0.76
SCN1B-202ENST00000415950 A0A087WX48 190 aa10.32□□□□□ -0.76
SCN1B-202ENST00000415950 SPRY2O43597 315 aa10.32□□□□□ -0.76
SCN1B-202ENST00000415950 LINC00477Q96M19 166 aa10.32□□□□□ -0.76
SCN1B-202ENST00000415950 PEMTQ9UBM1 199 aa10.32□□□□□ -0.76
SCN1B-202ENST00000415950 TRGV11A0A075B6L2 103 aa10.32□□□□□ -0.76
SCN1B-202ENST00000415950 SLC25A16P16260 332 aa10.32□□□□□ -0.76
SCN1B-202ENST00000415950 C11orf53Q8IXP5 236 aa10.32□□□□□ -0.76
SCN1B-202ENST00000415950 PRIMA1Q86XR5 153 aa10.32□□□□□ -0.76
SCN1B-202ENST00000415950 LINC01549A6NIU2 74 aa10.32□□□□□ -0.76
SCN1B-202ENST00000415950 OVOL3O00110 214 aa10.32□□□□□ -0.76
SCN1B-202ENST00000415950 PLEKHB2Q96CS7 222 aa10.32□□□□□ -0.76
SCN1B-202ENST00000415950 TTTY13Q9BZ97 58 aa10.32□□□□□ -0.76
SCN1B-202ENST00000415950 C11orf1Q9H5F2 150 aa10.32□□□□□ -0.76
SCN1B-202ENST00000415950 ADAMTS9Q9P2N4 1935 aa10.31□□□□□ -0.76
SCN1B-202ENST00000415950 K7ERJ3 54 aa10.31□□□□□ -0.76
SCN1B-202ENST00000415950 SAP30O75446 220 aa10.31□□□□□ -0.76
SCN1B-202ENST00000415950 DKK1O94907 266 aa10.31□□□□□ -0.76
SCN1B-202ENST00000415950 UTF1Q5T230 341 aa10.31□□□□□ -0.76
SCN1B-202ENST00000415950 NEGR1Q7Z3B1 354 aa10.31□□□□□ -0.76
SCN1B-202ENST00000415950 RHPN1-AS1Q9BWJ2 59 aa10.31□□□□□ -0.76
SCN1B-202ENST00000415950 TRAV26-2A0A0B4J265 109 aa10.31□□□□□ -0.76
SCN1B-202ENST00000415950 KIAA1549Q9HCM3 1950 aa10.31□□□□□ -0.76
SCN1B-202ENST00000415950 IGKV1OR2-108A0A075B7D4 117 aa10.31□□□□□ -0.76
SCN1B-202ENST00000415950 SMIM27A0A1W2PRY6 76 aa10.31□□□□□ -0.76
SCN1B-202ENST00000415950 C9orf139Q6ZV77 190 aa10.31□□□□□ -0.76
SCN1B-202ENST00000415950 NDUFA4L2Q9NRX3 87 aa10.31□□□□□ -0.76
SCN1B-202ENST00000415950 LAMTOR3Q9UHA4 124 aa10.31□□□□□ -0.76
SCN1B-202ENST00000415950 ANKRD11Q6UB99 2663 aaPredicted RBP10.31□□□□□ -0.76
SCN1B-202ENST00000415950 K7EP13 123 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms