RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 FNDC10F2Z333 226 aa3.54□□□□□ -1.84
VPS41-205ENST00000414632 SOCS3O14543 225 aa3.54□□□□□ -1.84
VPS41-205ENST00000414632 CDK2AP2O75956 126 aa3.54□□□□□ -1.84
VPS41-205ENST00000414632 CFDP00746 253 aaPredicted RBP3.54□□□□□ -1.84
VPS41-205ENST00000414632 RPL12P30050 165 aaKnown RBP3.54□□□□□ -1.84
VPS41-205ENST00000414632 S100A11P31949 105 aa3.54□□□□□ -1.84
VPS41-205ENST00000414632 ID1P41134 155 aa3.54□□□□□ -1.84
VPS41-205ENST00000414632 PSMB3P49720 205 aa3.54□□□□□ -1.84
VPS41-205ENST00000414632 CMC4P56277 68 aaPredicted RBP3.54□□□□□ -1.84
VPS41-205ENST00000414632 SNRPD3P62318 126 aaKnown RBP3.54□□□□□ -1.84
VPS41-205ENST00000414632 SELENOTP62341 195 aa3.54□□□□□ -1.84
VPS41-205ENST00000414632 HBG1P69891 147 aa3.54□□□□□ -1.84
VPS41-205ENST00000414632 HBG2P69892 147 aa3.54□□□□□ -1.84
VPS41-205ENST00000414632 CYCSP99999 105 aaKnown RBP3.54□□□□□ -1.84
VPS41-205ENST00000414632 RGS21Q2M5E4 152 aa3.54□□□□□ -1.84
VPS41-205ENST00000414632 Q5BKY6 102 aa3.54□□□□□ -1.84
VPS41-205ENST00000414632 GCSAMLQ5JQS6 135 aa3.54□□□□□ -1.84
VPS41-205ENST00000414632 C1orf194Q5T5A4 169 aa3.54□□□□□ -1.84
VPS41-205ENST00000414632 C10orf113Q5VZT2 155 aa3.54□□□□□ -1.84
VPS41-205ENST00000414632 SPATA31B1PQ5VZV4 182 aa3.54□□□□□ -1.84
VPS41-205ENST00000414632 OR4B1Q8NGF8 309 aa3.54□□□□□ -1.84
VPS41-205ENST00000414632 MUC7Q8TAX7 377 aa3.54□□□□□ -1.84
VPS41-205ENST00000414632 TMEM37Q8WXS4 190 aa3.54□□□□□ -1.84
VPS41-205ENST00000414632 GGACTQ9BVM4 153 aa3.54□□□□□ -1.84
VPS41-205ENST00000414632 SLC25A31Q9H0C2 315 aa3.54□□□□□ -1.84
VPS41-205ENST00000414632 HSPB11Q9Y547 144 aa3.54□□□□□ -1.84
VPS41-205ENST00000414632 DNAH1Q9P2D7 4330 aa3.54□□□□□ -1.84
VPS41-205ENST00000414632 IGHV3OR16-12A0A075B7B8 117 aa3.53□□□□□ -1.84
VPS41-205ENST00000414632 KIR2DL5BA0A0G2JN68 375 aa3.53□□□□□ -1.84
VPS41-205ENST00000414632 KIR2DL5BA0A0G2JPC4 375 aa3.53□□□□□ -1.84
VPS41-205ENST00000414632 A0A0U1RRA0 63 aa3.53□□□□□ -1.84
VPS41-205ENST00000414632 H3BMM0 161 aa3.53□□□□□ -1.84
VPS41-205ENST00000414632 SMLR1H3BR10 107 aa3.53□□□□□ -1.84
VPS41-205ENST00000414632 SLC17A3O00476 420 aa3.53□□□□□ -1.84
VPS41-205ENST00000414632 MRPS12O15235 138 aaKnown RBP3.53□□□□□ -1.84
VPS41-205ENST00000414632 IGKV2-30P06310 120 aa3.53□□□□□ -1.84
VPS41-205ENST00000414632 GIG44P09565 113 aaPredicted RBP3.53□□□□□ -1.84
VPS41-205ENST00000414632 PYYP10082 97 aa3.53□□□□□ -1.84
VPS41-205ENST00000414632 HLA-DRB4P13762 266 aa3.53□□□□□ -1.84
VPS41-205ENST00000414632 PLP1P60201 277 aa3.53□□□□□ -1.84
VPS41-205ENST00000414632 B2MP61769 119 aa3.53□□□□□ -1.84
VPS41-205ENST00000414632 RAB31Q13636 194 aa3.53□□□□□ -1.84
VPS41-205ENST00000414632 ATP6V1FQ16864 119 aa3.53□□□□□ -1.84
VPS41-205ENST00000414632 CASC10Q5T4H9 136 aa3.53□□□□□ -1.84
VPS41-205ENST00000414632 FAM78BQ5VT40 261 aa3.53□□□□□ -1.84
VPS41-205ENST00000414632 Q6ZRG5 221 aa3.53□□□□□ -1.84
VPS41-205ENST00000414632 NFE4Q86UQ8 179 aa3.53□□□□□ -1.84
VPS41-205ENST00000414632 KIR2DL5AQ8N109 375 aa3.53□□□□□ -1.84
VPS41-205ENST00000414632 ZNF738Q8NE65 137 aa3.53□□□□□ -1.84
VPS41-205ENST00000414632 OR11H2Q8NH07 326 aa3.53□□□□□ -1.84
VPS41-205ENST00000414632 KIR2DL5BQ8NHK3 375 aa3.53□□□□□ -1.84
VPS41-205ENST00000414632 LRRC20Q8TCA0 184 aa3.53□□□□□ -1.84
VPS41-205ENST00000414632 ATP5SQ99766 215 aa3.53□□□□□ -1.84
VPS41-205ENST00000414632 RARRES2Q99969 163 aa3.53□□□□□ -1.84
VPS41-205ENST00000414632 NPCDR1Q9BY65 106 aa3.53□□□□□ -1.84
VPS41-205ENST00000414632 SLC35B3Q9H1N7 401 aa3.53□□□□□ -1.84
VPS41-205ENST00000414632 SAV1Q9H4B6 383 aaPredicted RBP3.53□□□□□ -1.84
VPS41-205ENST00000414632 WFDC1Q9HC57 220 aa3.53□□□□□ -1.84
VPS41-205ENST00000414632 RPRMQ9NS64 109 aa3.53□□□□□ -1.84
VPS41-205ENST00000414632 SLC39A9Q9NUM3 307 aa3.53□□□□□ -1.84
VPS41-205ENST00000414632 XCL2Q9UBD3 114 aa3.53□□□□□ -1.84
VPS41-205ENST00000414632 HLA-DRB4X5D2U9 266 aa3.53□□□□□ -1.84
VPS41-205ENST00000414632 A0A0J9YX75 114 aa3.52□□□□□ -1.85
VPS41-205ENST00000414632 ZNF705FA8MVS1 300 aaPredicted RBP3.52□□□□□ -1.85
VPS41-205ENST00000414632 H3BQ15 152 aa3.52□□□□□ -1.85
VPS41-205ENST00000414632 ISLRO14498 428 aa3.52□□□□□ -1.85
VPS41-205ENST00000414632 PET100P0DJ07 73 aa3.52□□□□□ -1.85
VPS41-205ENST00000414632 RPL7P18124 248 aaKnown RBP3.52□□□□□ -1.85
VPS41-205ENST00000414632 RPL29P47914 159 aaKnown RBP3.52□□□□□ -1.85
VPS41-205ENST00000414632 MEOX2P50222 304 aa3.52□□□□□ -1.85
VPS41-205ENST00000414632 NANOS2P60321 138 aaKnown RBP3.52□□□□□ -1.85
VPS41-205ENST00000414632 HERV-K104P63124 156 aa3.52□□□□□ -1.85
VPS41-205ENST00000414632 CTAG1AP78358 180 aa3.52□□□□□ -1.85
VPS41-205ENST00000414632 HIST1H1AQ02539 215 aaPredicted RBP3.52□□□□□ -1.85
VPS41-205ENST00000414632 OXA1LQ15070 435 aa3.52□□□□□ -1.85
VPS41-205ENST00000414632 FFAR4Q5NUL3 377 aa3.52□□□□□ -1.85
VPS41-205ENST00000414632 EBLN2Q6P2I7 272 aa3.52□□□□□ -1.85
VPS41-205ENST00000414632 MORN3Q6PF18 240 aaPredicted RBP3.52□□□□□ -1.85
VPS41-205ENST00000414632 FOXI2Q6ZQN5 318 aa3.52□□□□□ -1.85
VPS41-205ENST00000414632 MIR17HGQ75NE6 70 aa3.52□□□□□ -1.85
VPS41-205ENST00000414632 BPIFA4PQ86YQ2 179 aa3.52□□□□□ -1.85
VPS41-205ENST00000414632 ZNF709Q8N972 641 aa3.52□□□□□ -1.85
VPS41-205ENST00000414632 OR1L4Q8NGR5 311 aa3.52□□□□□ -1.85
VPS41-205ENST00000414632 BLNKQ8WV28 456 aa3.52□□□□□ -1.85
VPS41-205ENST00000414632 MRPL53Q96EL3 112 aaKnown RBP3.52□□□□□ -1.85
VPS41-205ENST00000414632 GPR82Q96P67 336 aa3.52□□□□□ -1.85
VPS41-205ENST00000414632 PFDN5Q99471 154 aa3.52□□□□□ -1.85
VPS41-205ENST00000414632 PARD6GQ9BYG4 376 aaPredicted RBP3.52□□□□□ -1.85
VPS41-205ENST00000414632 WDR61Q9GZS3 305 aaKnown RBP3.52□□□□□ -1.85
VPS41-205ENST00000414632 MFFQ9GZY8 342 aa3.52□□□□□ -1.85
VPS41-205ENST00000414632 TP53TG1Q9Y2A0 90 aa3.52□□□□□ -1.85
VPS41-205ENST00000414632 RYR2Q92736 4967 aa3.52□□□□□ -1.85
VPS41-205ENST00000414632 TRAV12-2A0A075B6T6 113 aa3.51□□□□□ -1.85
VPS41-205ENST00000414632 FXYD6-FXYD2A0A087WZ82 144 aa3.51□□□□□ -1.85
VPS41-205ENST00000414632 LOC105371267A0A1B0GV96 52 aa3.51□□□□□ -1.85
VPS41-205ENST00000414632 C17orf112F2Z3M2 114 aa3.51□□□□□ -1.85
VPS41-205ENST00000414632 C3orf84H3BNL1 204 aa3.51□□□□□ -1.85
VPS41-205ENST00000414632 M0R2Z0 102 aa3.51□□□□□ -1.85
VPS41-205ENST00000414632 HMGB3O15347 200 aaKnown RBP3.51□□□□□ -1.85
VPS41-205ENST00000414632 MPDU1O75352 247 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms