RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 PGPA6NDG6 321 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 INAFM1C9JVW0 142 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 NDUFC2-KCTD14E9PQ53 114 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 LY6LH3BQJ8 138 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 H3BT86 120 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 SYS1-DBNDD2H3BUS1 97 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 UPK2O00526 184 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 SYNGR2O43760 224 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 JTBO76095 146 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 EPPINO95925 133 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 HLA-DQA1P01909 254 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 CRYGAP11844 174 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 COX6A1P12074 109 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 COX7CP15954 63 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 CBLN1P23435 193 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 CA7P43166 264 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 YPEL3P61236 119 aaPredicted RBP3.08□□□□□ -1.92
LINC01048-201ENST00000414480 ERVK-16P61578 105 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 UBE2L3P68036 154 aaKnown RBP3.08□□□□□ -1.92
LINC01048-201ENST00000414480 SRSF9Q13242 221 aaKnown RBP eCLIP3.08□□□□□ -1.92
LINC01048-201ENST00000414480 CDK5R1Q15078 307 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 NSUN5P1Q3KNT7 163 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 ZNF791Q3KP31 576 aaPredicted RBP3.08□□□□□ -1.92
LINC01048-201ENST00000414480 ORMDL2Q53FV1 153 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 SPANXN4Q5MJ08 99 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 MRPL2Q5T653 305 aaKnown RBP3.08□□□□□ -1.92
LINC01048-201ENST00000414480 LINC01545Q5VT33 79 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 PVRIGQ6DKI7 326 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 TRNP1Q6NT89 227 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 RFLNAQ6ZTI6 216 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 MRGPREQ86SM8 312 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 KTN1-AS1Q86SY8 53 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 WDR86Q86TI4 376 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 MSRB3Q8IXL7 192 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 AMN1Q8IY45 258 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 LINC00311Q8N616 119 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 OR8B3Q8NGG8 313 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 OR52N5Q8NH56 324 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 MRPL30Q8TCC3 161 aaKnown RBP3.08□□□□□ -1.92
LINC01048-201ENST00000414480 C18orf32Q8TCD1 76 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 C10orf105Q8TEF2 133 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 GPHA2Q96T91 129 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 PRSS27Q9BQR3 290 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 CHCHD5Q9BSY4 110 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 FAM103A1Q9BTL3 118 aaKnown RBP3.08□□□□□ -1.92
LINC01048-201ENST00000414480 GABARAPL3Q9BY60 117 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 DEFB127Q9H1M4 99 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 TNFRSF19Q9NS68 423 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 LINC00527Q9UJ94 153 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 TRAPPC1Q9Y5R8 145 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 SERP1Q9Y6X1 66 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 ARL2-SNX15V9GYD0 113 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 TGP01266 2768 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 SVEP1Q4LDE5 3571 aa3.08□□□□□ -1.92
LINC01048-201ENST00000414480 TRBV20OR9-2A0A075B6H5 130 aa3.07□□□□□ -1.92
LINC01048-201ENST00000414480 IGHV1-58A0A0C4DH39 117 aa3.07□□□□□ -1.92
LINC01048-201ENST00000414480 LOC285095A0A1B0GVY8 99 aa3.07□□□□□ -1.92
LINC01048-201ENST00000414480 A0A1B0GXF2 115 aa3.07□□□□□ -1.92
LINC01048-201ENST00000414480 YPEL1O60688 119 aa3.07□□□□□ -1.92
LINC01048-201ENST00000414480 WISP2O76076 250 aa3.07□□□□□ -1.92
LINC01048-201ENST00000414480 IGHG1P01857 330 aa3.07□□□□□ -1.92
LINC01048-201ENST00000414480 RBP4P02753 201 aa3.07□□□□□ -1.92
LINC01048-201ENST00000414480 LINC00869P0C866 280 aa3.07□□□□□ -1.92
LINC01048-201ENST00000414480 HLA-DRB4P13762 266 aa3.07□□□□□ -1.92
LINC01048-201ENST00000414480 VDAC1P21796 283 aa3.07□□□□□ -1.92
LINC01048-201ENST00000414480 CSN1S1P47710 185 aa3.07□□□□□ -1.92
LINC01048-201ENST00000414480 DAPP51397 102 aa3.07□□□□□ -1.92
LINC01048-201ENST00000414480 MP68P56378 58 aa3.07□□□□□ -1.92
LINC01048-201ENST00000414480 SNRPD3P62318 126 aaKnown RBP3.07□□□□□ -1.92
LINC01048-201ENST00000414480 ADIGQ0VDE8 80 aa3.07□□□□□ -1.92
LINC01048-201ENST00000414480 WFDC2Q14508 124 aa3.07□□□□□ -1.92
LINC01048-201ENST00000414480 ZNF260Q3ZCT1 412 aa3.07□□□□□ -1.92
LINC01048-201ENST00000414480 RNASE12Q5GAN4 147 aaKnown RBP3.07□□□□□ -1.92
LINC01048-201ENST00000414480 NMSQ5H8A3 153 aa3.07□□□□□ -1.92
LINC01048-201ENST00000414480 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.07□□□□□ -1.92
LINC01048-201ENST00000414480 RPL7L1Q6DKI1 246 aaKnown RBP3.07□□□□□ -1.92
LINC01048-201ENST00000414480 SH2D6Q7Z4S9 175 aa3.07□□□□□ -1.92
LINC01048-201ENST00000414480 LINC00596Q86U02 117 aa3.07□□□□□ -1.92
LINC01048-201ENST00000414480 ZNF101Q8IZC7 436 aa3.07□□□□□ -1.92
LINC01048-201ENST00000414480 ZIC4Q8N9L1 334 aa3.07□□□□□ -1.92
LINC01048-201ENST00000414480 OR10G2Q8NGC3 310 aa3.07□□□□□ -1.92
LINC01048-201ENST00000414480 NTN5Q8WTR8 489 aaPredicted RBP3.07□□□□□ -1.92
LINC01048-201ENST00000414480 CCL17Q92583 94 aa3.07□□□□□ -1.92
LINC01048-201ENST00000414480 ZNF501Q96CX3 271 aaPredicted RBP3.07□□□□□ -1.92
LINC01048-201ENST00000414480 YPEL2Q96QA6 119 aa3.07□□□□□ -1.92
LINC01048-201ENST00000414480 OR2A5Q96R48 311 aa3.07□□□□□ -1.92
LINC01048-201ENST00000414480 MGST2Q99735 147 aa3.07□□□□□ -1.92
LINC01048-201ENST00000414480 PLEKHF2Q9H8W4 249 aa3.07□□□□□ -1.92
LINC01048-201ENST00000414480 MANBALQ9NQG1 85 aa3.07□□□□□ -1.92
LINC01048-201ENST00000414480 LSM2Q9Y333 95 aaKnown RBP3.07□□□□□ -1.92
LINC01048-201ENST00000414480 HLA-DRB4X5D2U9 266 aa3.07□□□□□ -1.92
LINC01048-201ENST00000414480 NBEAL2Q6ZNJ1 2754 aa3.06□□□□□ -1.92
LINC01048-201ENST00000414480 TRAV2A0A0B4J234 112 aa3.06□□□□□ -1.92
LINC01048-201ENST00000414480 TRAV41A0A0B4J266 112 aa3.06□□□□□ -1.92
LINC01048-201ENST00000414480 TRGV8A0A0C4DH27 118 aa3.06□□□□□ -1.92
LINC01048-201ENST00000414480 M0R381 172 aa3.06□□□□□ -1.92
LINC01048-201ENST00000414480 ATOX1O00244 68 aa3.06□□□□□ -1.92
LINC01048-201ENST00000414480 SDCBPO00560 298 aaPredicted RBP3.06□□□□□ -1.92
LINC01048-201ENST00000414480 NDUFS7O75251 213 aa3.06□□□□□ -1.92
LINC01048-201ENST00000414480 ZNF737O75373 536 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms