RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 LYPD1Q8N2G4 141 aa7.96□□□□□ -1.14
RFFL-204ENST00000414419 PHYHIPLQ96FC7 376 aa7.96□□□□□ -1.14
RFFL-204ENST00000414419 AQP10Q96PS8 301 aa7.96□□□□□ -1.14
RFFL-204ENST00000414419 PYGO2Q9BRQ0 406 aa7.96□□□□□ -1.14
RFFL-204ENST00000414419 AGPAT4-IT1Q9H0P7 198 aa7.96□□□□□ -1.14
RFFL-204ENST00000414419 NOP10Q9NPE3 64 aaKnown RBP7.96□□□□□ -1.14
RFFL-204ENST00000414419 IGKV2-40A0A087WW87 121 aaPredicted RBP7.95□□□□□ -1.14
RFFL-204ENST00000414419 PLAC8L1A1L4L8 177 aa7.95□□□□□ -1.14
RFFL-204ENST00000414419 C7orf71A4D174 169 aa7.95□□□□□ -1.14
RFFL-204ENST00000414419 SNURFLB1AK76 121 aa7.95□□□□□ -1.14
RFFL-204ENST00000414419 IGKV2D-40P01614 121 aaPredicted RBP7.95□□□□□ -1.14
RFFL-204ENST00000414419 ATP5G1P05496 136 aa7.95□□□□□ -1.14
RFFL-204ENST00000414419 RNASE4P34096 147 aaKnown RBP7.95□□□□□ -1.14
RFFL-204ENST00000414419 ATP5G3P48201 142 aa7.95□□□□□ -1.14
RFFL-204ENST00000414419 PQLC2Q6ZP29 291 aa7.95□□□□□ -1.14
RFFL-204ENST00000414419 HSD17B11Q8NBQ5 300 aa7.95□□□□□ -1.14
RFFL-204ENST00000414419 OR10G4Q8NGN3 311 aa7.95□□□□□ -1.14
RFFL-204ENST00000414419 OR10G9Q8NGN4 311 aa7.95□□□□□ -1.14
RFFL-204ENST00000414419 OR10G7Q8NGN6 311 aa7.95□□□□□ -1.14
RFFL-204ENST00000414419 RNASE8Q8TDE3 154 aaKnown RBP7.95□□□□□ -1.14
RFFL-204ENST00000414419 RXFP4Q8TDU9 374 aa7.95□□□□□ -1.14
RFFL-204ENST00000414419 Q9H3A6 140 aa7.95□□□□□ -1.14
RFFL-204ENST00000414419 HYDINQ4G0P3 5121 aa7.94□□□□□ -1.14
RFFL-204ENST00000414419 FXYD6-FXYD2A0A087WZ82 144 aa7.94□□□□□ -1.14
RFFL-204ENST00000414419 CBY3A6NI87 242 aa7.94□□□□□ -1.14
RFFL-204ENST00000414419 F5H768 121 aa7.94□□□□□ -1.14
RFFL-204ENST00000414419 MBP02144 154 aa7.94□□□□□ -1.14
RFFL-204ENST00000414419 NMBP08949 121 aa7.94□□□□□ -1.14
RFFL-204ENST00000414419 RAB2AP61019 212 aa7.94□□□□□ -1.14
RFFL-204ENST00000414419 Q5BKY6 102 aa7.94□□□□□ -1.14
RFFL-204ENST00000414419 TMEM88Q6PEY1 159 aa7.94□□□□□ -1.14
RFFL-204ENST00000414419 UBE2DNLQ8IWF7 75 aa7.94□□□□□ -1.14
RFFL-204ENST00000414419 OR2T35Q8NGX2 323 aa7.94□□□□□ -1.14
RFFL-204ENST00000414419 CMTM2Q8TAZ6 248 aa7.94□□□□□ -1.14
RFFL-204ENST00000414419 ZNF503Q96F45 646 aa7.94□□□□□ -1.14
RFFL-204ENST00000414419 HYLS1Q96M11 299 aa7.94□□□□□ -1.14
RFFL-204ENST00000414419 VGLL1Q99990 258 aa7.94□□□□□ -1.14
RFFL-204ENST00000414419 ZNF492Q9P255 531 aa7.94□□□□□ -1.14
RFFL-204ENST00000414419 BORCS7-ASMTA0A0B4J1R7 106 aa7.93□□□□□ -1.14
RFFL-204ENST00000414419 RBAKDNA6NC62 111 aa7.93□□□□□ -1.14
RFFL-204ENST00000414419 PGPA6NDG6 321 aa7.93□□□□□ -1.14
RFFL-204ENST00000414419 KLLNB2CW77 178 aa7.93□□□□□ -1.14
RFFL-204ENST00000414419 RGS13O14921 159 aa7.93□□□□□ -1.14
RFFL-204ENST00000414419 EIF3GO75821 320 aaKnown RBP eCLIP7.93□□□□□ -1.14
RFFL-204ENST00000414419 CRISP2P16562 243 aa7.93□□□□□ -1.14
RFFL-204ENST00000414419 ATP6V0CP27449 155 aa7.93□□□□□ -1.14
RFFL-204ENST00000414419 CDC34P49427 236 aaPredicted RBP7.93□□□□□ -1.14
RFFL-204ENST00000414419 ZNF138P52744 262 aa7.93□□□□□ -1.14
RFFL-204ENST00000414419 SERF2P84101 59 aa7.93□□□□□ -1.14
RFFL-204ENST00000414419 CD300CQ08708 224 aa7.93□□□□□ -1.14
RFFL-204ENST00000414419 BTN1A1Q13410 526 aa7.93□□□□□ -1.14
RFFL-204ENST00000414419 POM121L12Q8N7R1 296 aa7.93□□□□□ -1.14
RFFL-204ENST00000414419 C15orf53Q8NAA6 179 aa7.93□□□□□ -1.14
RFFL-204ENST00000414419 ZNF680Q8NEM1 530 aa7.93□□□□□ -1.14
RFFL-204ENST00000414419 OR2G3Q8NGZ4 309 aa7.93□□□□□ -1.14
RFFL-204ENST00000414419 FAM19A4Q96LR4 140 aa7.93□□□□□ -1.14
RFFL-204ENST00000414419 PSMG3Q9BT73 122 aaPredicted RBP7.93□□□□□ -1.14
RFFL-204ENST00000414419 OTORQ9NRC9 128 aa7.93□□□□□ -1.14
RFFL-204ENST00000414419 HMGB3O15347 200 aaKnown RBP7.92□□□□□ -1.14
RFFL-204ENST00000414419 EIF4E3Q8N5X7 224 aaKnown RBP7.92□□□□□ -1.14
RFFL-204ENST00000414419 GNPNAT1Q96EK6 184 aaPredicted RBP7.92□□□□□ -1.14
RFFL-204ENST00000414419 RPH3ALQ9UNE2 315 aa7.92□□□□□ -1.14
RFFL-204ENST00000414419 TRBV7-9A0A0J9YWB2 115 aa7.91□□□□□ -1.14
RFFL-204ENST00000414419 DIRC3C9JPN6 131 aa7.91□□□□□ -1.14
RFFL-204ENST00000414419 ZNF324O75467 553 aaPredicted RBP7.91□□□□□ -1.14
RFFL-204ENST00000414419 Q8TAT8 98 aa7.91□□□□□ -1.14
RFFL-204ENST00000414419 ARPC5LQ9BPX5 153 aa7.91□□□□□ -1.14
RFFL-204ENST00000414419 ACTR3CQ9C0K3 210 aaPredicted RBP7.91□□□□□ -1.14
RFFL-204ENST00000414419 TNFSF18Q9UNG2 199 aa7.91□□□□□ -1.14
RFFL-204ENST00000414419 GAGE12BA1L429 117 aa7.9□□□□□ -1.14
RFFL-204ENST00000414419 RNF222A6NCQ9 220 aa7.9□□□□□ -1.14
RFFL-204ENST00000414419 GAGE7O76087 117 aa7.9□□□□□ -1.14
RFFL-204ENST00000414419 NUDT3O95989 172 aa7.9□□□□□ -1.14
RFFL-204ENST00000414419 GAGE12FP0CL80 117 aa7.9□□□□□ -1.14
RFFL-204ENST00000414419 GAGE12GP0CL81 117 aa7.9□□□□□ -1.14
RFFL-204ENST00000414419 GAGE12IP0CL82 117 aa7.9□□□□□ -1.14
RFFL-204ENST00000414419 ARL14EPLP0DKL9 152 aa7.9□□□□□ -1.14
RFFL-204ENST00000414419 DAZ2Q13117 558 aaKnown RBP7.9□□□□□ -1.14
RFFL-204ENST00000414419 OR5I1Q13606 314 aa7.9□□□□□ -1.14
RFFL-204ENST00000414419 ANXA2RQ3ZCQ2 193 aa7.9□□□□□ -1.14
RFFL-204ENST00000414419 RNF212Q495C1 297 aa7.9□□□□□ -1.14
RFFL-204ENST00000414419 RPL7L1Q6DKI1 246 aaKnown RBP7.9□□□□□ -1.14
RFFL-204ENST00000414419 ZFAND2AQ8N6M9 145 aa7.9□□□□□ -1.14
RFFL-204ENST00000414419 RAB24Q969Q5 203 aa7.9□□□□□ -1.14
RFFL-204ENST00000414419 LINC00467Q9BRT7 94 aa7.9□□□□□ -1.14
RFFL-204ENST00000414419 ATG101Q9BSB4 218 aa7.9□□□□□ -1.14
RFFL-204ENST00000414419 LENEPQ9Y5L5 61 aa7.9□□□□□ -1.14
RFFL-204ENST00000414419 NACAE9PAV3 2078 aa7.9□□□□□ -1.15
RFFL-204ENST00000414419 TRGV2A0A075B6R0 118 aa7.89□□□□□ -1.15
RFFL-204ENST00000414419 IGHV1OR15-1A0A075B7D0 117 aa7.89□□□□□ -1.15
RFFL-204ENST00000414419 TAAR5O14804 337 aa7.89□□□□□ -1.15
RFFL-204ENST00000414419 ARPC5O15511 151 aa7.89□□□□□ -1.15
RFFL-204ENST00000414419 CXorf1O96002 111 aa7.89□□□□□ -1.15
RFFL-204ENST00000414419 STAG3L2P0CL84 134 aa7.89□□□□□ -1.15
RFFL-204ENST00000414419 STAG3L3P0CL85 134 aa7.89□□□□□ -1.15
RFFL-204ENST00000414419 GOLT1AQ6ZVE7 132 aa7.89□□□□□ -1.15
RFFL-204ENST00000414419 ARL6IP6Q8N6S5 226 aa7.89□□□□□ -1.15
RFFL-204ENST00000414419 TMED6Q8WW62 240 aa7.89□□□□□ -1.15
RFFL-204ENST00000414419 SH3BGRL3Q9H299 93 aa7.89□□□□□ -1.15
RFFL-204ENST00000414419 GSN-AS1Q9NRJ2 163 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms