RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 NRN1Q9NPD7 142 aa12.61□□□□□ -0.39
SCAMP4-204ENST00000414057 GNG4P50150 75 aa12.6□□□□□ -0.39
SCAMP4-204ENST00000414057 UBE2G1P62253 170 aa12.6□□□□□ -0.39
SCAMP4-204ENST00000414057 DEFB125Q8N687 156 aa12.6□□□□□ -0.39
SCAMP4-204ENST00000414057 MLXQ9UH92 298 aa12.6□□□□□ -0.39
SCAMP4-204ENST00000414057 NBEAL2Q6ZNJ1 2754 aa12.6□□□□□ -0.39
SCAMP4-204ENST00000414057 A0A087WWC5 75 aa12.59□□□□□ -0.39
SCAMP4-204ENST00000414057 TRBV6-1A0A0K0K1D8 114 aa12.59□□□□□ -0.39
SCAMP4-204ENST00000414057 EDN2P20800 178 aa12.59□□□□□ -0.39
SCAMP4-204ENST00000414057 RPL23P62829 140 aaKnown RBP12.59□□□□□ -0.39
SCAMP4-204ENST00000414057 TMEM61Q8N0U2 210 aa12.59□□□□□ -0.39
SCAMP4-204ENST00000414057 IL17DQ8TAD2 202 aa12.59□□□□□ -0.39
SCAMP4-204ENST00000414057 DNAH7Q8WXX0 4024 aa12.59□□□□□ -0.39
SCAMP4-204ENST00000414057 STAB2Q8WWQ8 2551 aa12.59□□□□□ -0.39
SCAMP4-204ENST00000414057 RYR3Q15413 4870 aa12.59□□□□□ -0.39
SCAMP4-204ENST00000414057 TRBV20OR9-2A0A075B6H5 130 aa12.59□□□□□ -0.39
SCAMP4-204ENST00000414057 C7orf77A4D0Y5 90 aa12.59□□□□□ -0.39
SCAMP4-204ENST00000414057 DIRC3C9JPN6 131 aa12.59□□□□□ -0.39
SCAMP4-204ENST00000414057 GNG5P63218 68 aa12.59□□□□□ -0.39
SCAMP4-204ENST00000414057 ATRAIDQ6UW56 229 aa12.59□□□□□ -0.39
SCAMP4-204ENST00000414057 LINC01551Q86U37 167 aa12.59□□□□□ -0.39
SCAMP4-204ENST00000414057 TMEM75Q8N9X5 138 aa12.59□□□□□ -0.39
SCAMP4-204ENST00000414057 ADIRFQ15847 76 aa12.58□□□□□ -0.4
SCAMP4-204ENST00000414057 CENPWQ5EE01 88 aa12.58□□□□□ -0.4
SCAMP4-204ENST00000414057 TCF24Q7RTU0 167 aa12.58□□□□□ -0.4
SCAMP4-204ENST00000414057 C16orf92Q96LL3 132 aa12.58□□□□□ -0.4
SCAMP4-204ENST00000414057 IGF2BP2-AS1Q96M15 143 aa12.58□□□□□ -0.4
SCAMP4-204ENST00000414057 ISLRO14498 428 aa12.57□□□□□ -0.4
SCAMP4-204ENST00000414057 RPL11P62913 178 aaKnown RBP12.57□□□□□ -0.4
SCAMP4-204ENST00000414057 ZFAND6Q6FIF0 208 aa12.57□□□□□ -0.4
SCAMP4-204ENST00000414057 GOLT1AQ6ZVE7 132 aa12.57□□□□□ -0.4
SCAMP4-204ENST00000414057 RPS10P5Q9NQ39 176 aa12.57□□□□□ -0.4
SCAMP4-204ENST00000414057 TMEM242Q9NWH2 141 aa12.57□□□□□ -0.4
SCAMP4-204ENST00000414057 RPH3ALQ9UNE2 315 aa12.57□□□□□ -0.4
SCAMP4-204ENST00000414057 RBAKDNA6NC62 111 aa12.56□□□□□ -0.4
SCAMP4-204ENST00000414057 RBMY1BA6NDE4 496 aaKnown RBP12.56□□□□□ -0.4
SCAMP4-204ENST00000414057 RBMY1EA6NEQ0 496 aaKnown RBP12.56□□□□□ -0.4
SCAMP4-204ENST00000414057 M0R3E3 92 aa12.56□□□□□ -0.4
SCAMP4-204ENST00000414057 SOCS3O14543 225 aa12.56□□□□□ -0.4
SCAMP4-204ENST00000414057 TSPAN4O14817 238 aa12.56□□□□□ -0.4
SCAMP4-204ENST00000414057 MT-ND4LP03901 98 aa12.56□□□□□ -0.4
SCAMP4-204ENST00000414057 RBMY1DP0C7P1 496 aaKnown RBP12.56□□□□□ -0.4
SCAMP4-204ENST00000414057 SPAG8Q99932 426 aaPredicted RBP12.56□□□□□ -0.4
SCAMP4-204ENST00000414057 CTDSP1Q9GZU7 261 aa12.56□□□□□ -0.4
SCAMP4-204ENST00000414057 BIN3Q9NQY0 253 aa12.56□□□□□ -0.4
SCAMP4-204ENST00000414057 TRAV8-2A0A0B4J237 113 aa12.55□□□□□ -0.4
SCAMP4-204ENST00000414057 LTAP01374 205 aa12.55□□□□□ -0.4
SCAMP4-204ENST00000414057 ID1P41134 155 aa12.55□□□□□ -0.4
SCAMP4-204ENST00000414057 PSG3Q16557 428 aa12.55□□□□□ -0.4
SCAMP4-204ENST00000414057 BAGE2Q86Y30 109 aa12.55□□□□□ -0.4
SCAMP4-204ENST00000414057 OCC1Q8TAD7 63 aa12.55□□□□□ -0.4
SCAMP4-204ENST00000414057 ISOC2Q96AB3 205 aa12.55□□□□□ -0.4
SCAMP4-204ENST00000414057 ANAPC16Q96DE5 110 aa12.55□□□□□ -0.4
SCAMP4-204ENST00000414057 WFDC10AQ9H1F0 79 aa12.55□□□□□ -0.4
SCAMP4-204ENST00000414057 LOC102724200A0A096LPH7 203 aaPredicted RBP12.54□□□□□ -0.4
SCAMP4-204ENST00000414057 PPP1R2P9O14990 202 aa12.54□□□□□ -0.4
SCAMP4-204ENST00000414057 PAFAH1B2P68402 229 aa12.54□□□□□ -0.4
SCAMP4-204ENST00000414057 FLI1Q01543 452 aaPredicted RBP12.54□□□□□ -0.4
SCAMP4-204ENST00000414057 LINC00479Q96M42 142 aa12.54□□□□□ -0.4
SCAMP4-204ENST00000414057 ZFP30Q9Y2G7 519 aa12.54□□□□□ -0.4
SCAMP4-204ENST00000414057 SELENOKQ9Y6D0 94 aa12.54□□□□□ -0.4
SCAMP4-204ENST00000414057 TRAV2A0A0B4J234 112 aa12.53□□□□□ -0.4
SCAMP4-204ENST00000414057 TRAV34A0A0B4J273 112 aa12.53□□□□□ -0.4
SCAMP4-204ENST00000414057 CXorf65A6NEN9 183 aa12.53□□□□□ -0.4
SCAMP4-204ENST00000414057 SCO1O75880 301 aa12.53□□□□□ -0.4
SCAMP4-204ENST00000414057 Q86TA4 180 aa12.53□□□□□ -0.4
SCAMP4-204ENST00000414057 RETNQ9HD89 108 aa12.53□□□□□ -0.4
SCAMP4-204ENST00000414057 SMCO4Q9NRQ5 59 aa12.53□□□□□ -0.4
SCAMP4-204ENST00000414057 PGPEP1LA6NFU8 196 aa12.53□□□□□ -0.4
SCAMP4-204ENST00000414057 GCGP01275 180 aa12.53□□□□□ -0.4
SCAMP4-204ENST00000414057 IGLV2-11P01706 119 aa12.53□□□□□ -0.4
SCAMP4-204ENST00000414057 DCANP1Q8TF63 244 aa12.53□□□□□ -0.4
SCAMP4-204ENST00000414057 FAM110AQ9BQ89 295 aa12.53□□□□□ -0.4
SCAMP4-204ENST00000414057 MS4A6AQ9H2W1 248 aa12.53□□□□□ -0.4
SCAMP4-204ENST00000414057 LCE6AA0A183 80 aa12.52□□□□□ -0.41
SCAMP4-204ENST00000414057 IGLV2-8P01709 118 aa12.52□□□□□ -0.41
SCAMP4-204ENST00000414057 RNF212Q495C1 297 aa12.52□□□□□ -0.41
SCAMP4-204ENST00000414057 IGFL4Q6B9Z1 124 aa12.52□□□□□ -0.41
SCAMP4-204ENST00000414057 TMEM183AQ8IXX5 376 aa12.52□□□□□ -0.41
SCAMP4-204ENST00000414057 RNF182Q8N6D2 247 aa12.52□□□□□ -0.41
SCAMP4-204ENST00000414057 SFRP2Q96HF1 295 aa12.52□□□□□ -0.41
SCAMP4-204ENST00000414057 MLST8Q9BVC4 326 aa12.52□□□□□ -0.41
SCAMP4-204ENST00000414057 PSG8Q9UQ74 426 aa12.52□□□□□ -0.41
SCAMP4-204ENST00000414057 OR4C46A6NHA9 309 aa12.51□□□□□ -0.41
SCAMP4-204ENST00000414057 K7EN84 100 aa12.51□□□□□ -0.41
SCAMP4-204ENST00000414057 DNASE2O00115 360 aaPredicted RBP12.51□□□□□ -0.41
SCAMP4-204ENST00000414057 HLA-DMBP28068 263 aa12.51□□□□□ -0.41
SCAMP4-204ENST00000414057 APOC4P55056 127 aa12.51□□□□□ -0.41
SCAMP4-204ENST00000414057 SNRPD3P62318 126 aaKnown RBP12.51□□□□□ -0.41
SCAMP4-204ENST00000414057 BTN1A1Q13410 526 aa12.51□□□□□ -0.41
SCAMP4-204ENST00000414057 SAPCD1Q5SSQ6 148 aa12.51□□□□□ -0.41
SCAMP4-204ENST00000414057 TRAV8-1A0A0A6YYK1 113 aa12.5□□□□□ -0.41
SCAMP4-204ENST00000414057 K7EQG2 157 aa12.5□□□□□ -0.41
SCAMP4-204ENST00000414057 MGST1P10620 155 aaKnown RBP12.5□□□□□ -0.41
SCAMP4-204ENST00000414057 FAM231DQ6ZW35 169 aa12.5□□□□□ -0.41
SCAMP4-204ENST00000414057 PRNTQ86SH4 94 aa12.5□□□□□ -0.41
SCAMP4-204ENST00000414057 C15orf54Q8N8G6 183 aa12.5□□□□□ -0.41
SCAMP4-204ENST00000414057 ZNF738Q8NE65 137 aa12.5□□□□□ -0.41
SCAMP4-204ENST00000414057 OSTCQ9NRP0 149 aa12.5□□□□□ -0.41
SCAMP4-204ENST00000414057 PPP1R14DQ9NXH3 145 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms