RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 PLECQ15149 4684 aaKnown RBP8.6□□□□□ -1.03
NEDD1-202ENST00000411739 KANTRA0A1W2PQU2 76 aa8.59□□□□□ -1.03
NEDD1-202ENST00000411739 BCL2L11O43521 198 aa8.59□□□□□ -1.03
NEDD1-202ENST00000411739 AMBPP02760 352 aa8.59□□□□□ -1.03
NEDD1-202ENST00000411739 RRN3P1Q2M238 152 aa8.59□□□□□ -1.03
NEDD1-202ENST00000411739 PHLDA1Q8WV24 401 aaPredicted RBP8.59□□□□□ -1.03
NEDD1-202ENST00000411739 A0A0D9SG52 128 aa8.59□□□□□ -1.03
NEDD1-202ENST00000411739 PFDN1O60925 122 aa8.59□□□□□ -1.03
NEDD1-202ENST00000411739 LGALSLQ3ZCW2 172 aaPredicted RBP8.59□□□□□ -1.03
NEDD1-202ENST00000411739 SGK494Q96LW2 274 aa8.59□□□□□ -1.03
NEDD1-202ENST00000411739 NEU1Q99519 415 aa8.59□□□□□ -1.03
NEDD1-202ENST00000411739 RNASE4P34096 147 aaKnown RBP8.58□□□□□ -1.04
NEDD1-202ENST00000411739 CSN1S1P47710 185 aa8.58□□□□□ -1.04
NEDD1-202ENST00000411739 BTN1A1Q13410 526 aa8.58□□□□□ -1.04
NEDD1-202ENST00000411739 Q6ZTC4 211 aa8.58□□□□□ -1.04
NEDD1-202ENST00000411739 TCTE3Q8IZS6 198 aa8.58□□□□□ -1.04
NEDD1-202ENST00000411739 OTORQ9NRC9 128 aa8.58□□□□□ -1.04
NEDD1-202ENST00000411739 YTHDF2Q9Y5A9 579 aaKnown RBP8.58□□□□□ -1.04
NEDD1-202ENST00000411739 A0A1B0GV50 99 aa8.58□□□□□ -1.04
NEDD1-202ENST00000411739 DIRC3C9JPN6 131 aa8.58□□□□□ -1.04
NEDD1-202ENST00000411739 TSPOP30536 169 aa8.58□□□□□ -1.04
NEDD1-202ENST00000411739 C12orf74Q32Q52 190 aa8.58□□□□□ -1.04
NEDD1-202ENST00000411739 TMEM78Q5T7P6 136 aa8.58□□□□□ -1.04
NEDD1-202ENST00000411739 PRR9Q5T870 116 aa8.58□□□□□ -1.04
NEDD1-202ENST00000411739 C9orf47Q6ZRZ4 202 aa8.58□□□□□ -1.04
NEDD1-202ENST00000411739 AKAP14Q86UN6 197 aa8.58□□□□□ -1.04
NEDD1-202ENST00000411739 LINC00477Q96M19 166 aa8.58□□□□□ -1.04
NEDD1-202ENST00000411739 TRAV8-1A0A0A6YYK1 113 aa8.57□□□□□ -1.04
NEDD1-202ENST00000411739 SMIM9A6NGZ8 99 aa8.57□□□□□ -1.04
NEDD1-202ENST00000411739 CXorf1O96002 111 aa8.57□□□□□ -1.04
NEDD1-202ENST00000411739 LEPP41159 167 aa8.57□□□□□ -1.04
NEDD1-202ENST00000411739 UBE2G2P60604 165 aa8.57□□□□□ -1.04
NEDD1-202ENST00000411739 FAM222AQ5U5X8 452 aa8.57□□□□□ -1.04
NEDD1-202ENST00000411739 CEMP1Q6PRD7 247 aaPredicted RBP8.57□□□□□ -1.04
NEDD1-202ENST00000411739 GOLT1AQ6ZVE7 132 aa8.57□□□□□ -1.04
NEDD1-202ENST00000411739 LYPD1Q8N2G4 141 aa8.57□□□□□ -1.04
NEDD1-202ENST00000411739 CMTM2Q8TAZ6 248 aa8.57□□□□□ -1.04
NEDD1-202ENST00000411739 CTXND1A0A1B0GTU2 59 aa8.57□□□□□ -1.04
NEDD1-202ENST00000411739 SLC25A5P05141 298 aaKnown RBP8.57□□□□□ -1.04
NEDD1-202ENST00000411739 ZNF492Q9P255 531 aa8.57□□□□□ -1.04
NEDD1-202ENST00000411739 RYR3Q15413 4870 aa8.56□□□□□ -1.04
NEDD1-202ENST00000411739 SUMO1P63165 101 aaKnown RBP8.56□□□□□ -1.04
NEDD1-202ENST00000411739 TMED6Q8WW62 240 aa8.56□□□□□ -1.04
NEDD1-202ENST00000411739 FAM19A4Q96LR4 140 aa8.56□□□□□ -1.04
NEDD1-202ENST00000411739 GPX1P07203 203 aa8.56□□□□□ -1.04
NEDD1-202ENST00000411739 ZNF138P52744 262 aa8.56□□□□□ -1.04
NEDD1-202ENST00000411739 ZFAND2AQ8N6M9 145 aa8.56□□□□□ -1.04
NEDD1-202ENST00000411739 DKK2Q9UBU2 259 aa8.56□□□□□ -1.04
NEDD1-202ENST00000411739 GGTLC3B5MD39 225 aa8.55□□□□□ -1.04
NEDD1-202ENST00000411739 C1QBP02746 253 aa8.55□□□□□ -1.04
NEDD1-202ENST00000411739 FAM213BQ8TBF2 198 aa8.55□□□□□ -1.04
NEDD1-202ENST00000411739 RXFP4Q8TDU9 374 aa8.55□□□□□ -1.04
NEDD1-202ENST00000411739 PLAC8L1A1L4L8 177 aa8.55□□□□□ -1.04
NEDD1-202ENST00000411739 C7orf71A4D174 169 aa8.55□□□□□ -1.04
NEDD1-202ENST00000411739 MAP1LC3B2A6NCE7 125 aa8.55□□□□□ -1.04
NEDD1-202ENST00000411739 SPART-AS1P0CW21 52 aa8.55□□□□□ -1.04
NEDD1-202ENST00000411739 TAS2R60P59551 318 aa8.55□□□□□ -1.04
NEDD1-202ENST00000411739 FAM74A1Q5RGS3 127 aa8.55□□□□□ -1.04
NEDD1-202ENST00000411739 SUN5Q8TC36 379 aa8.55□□□□□ -1.04
NEDD1-202ENST00000411739 ODF3Q96PU9 254 aa8.55□□□□□ -1.04
NEDD1-202ENST00000411739 MAP1LC3BQ9GZQ8 125 aa8.55□□□□□ -1.04
NEDD1-202ENST00000411739 DYNC2H1Q8NCM8 4307 aaKnown RBP8.54□□□□□ -1.04
NEDD1-202ENST00000411739 SACSQ9NZJ4 4579 aa8.54□□□□□ -1.04
NEDD1-202ENST00000411739 NUPR2A6NF83 97 aa8.54□□□□□ -1.04
NEDD1-202ENST00000411739 KLLNB2CW77 178 aa8.54□□□□□ -1.04
NEDD1-202ENST00000411739 H7BYZ3 331 aa8.54□□□□□ -1.04
NEDD1-202ENST00000411739 SEC11BP0C7V7 166 aa8.54□□□□□ -1.04
NEDD1-202ENST00000411739 HTN3P15516 51 aa8.54□□□□□ -1.04
NEDD1-202ENST00000411739 NIPSNAP3BQ9BS92 247 aa8.54□□□□□ -1.04
NEDD1-202ENST00000411739 TMEM167BQ9NRX6 74 aa8.54□□□□□ -1.04
NEDD1-202ENST00000411739 TMEM189A5PLL7 270 aa8.54□□□□□ -1.04
NEDD1-202ENST00000411739 IGLL5B9A064 214 aa8.54□□□□□ -1.04
NEDD1-202ENST00000411739 ZNF324O75467 553 aaPredicted RBP8.54□□□□□ -1.04
NEDD1-202ENST00000411739 DEFB130BP0DP73 79 aa8.54□□□□□ -1.04
NEDD1-202ENST00000411739 DEFB130AP0DP74 79 aa8.54□□□□□ -1.04
NEDD1-202ENST00000411739 NKX2-5P52952 324 aaPredicted RBP8.54□□□□□ -1.04
NEDD1-202ENST00000411739 TMEM256Q8N2U0 113 aa8.54□□□□□ -1.04
NEDD1-202ENST00000411739 TPT1P13693 172 aaKnown RBP8.53□□□□□ -1.04
NEDD1-202ENST00000411739 SFT2D1Q8WV19 159 aa8.53□□□□□ -1.04
NEDD1-202ENST00000411739 TVP23CQ96ET8 276 aa8.53□□□□□ -1.04
NEDD1-202ENST00000411739 LINC00479Q96M42 142 aa8.53□□□□□ -1.04
NEDD1-202ENST00000411739 NOP10Q9NPE3 64 aaKnown RBP8.53□□□□□ -1.04
NEDD1-202ENST00000411739 TP53TG3Q9ULZ0 132 aa8.53□□□□□ -1.04
NEDD1-202ENST00000411739 RBAKDNA6NC62 111 aa8.53□□□□□ -1.04
NEDD1-202ENST00000411739 F6UZH7 168 aa8.53□□□□□ -1.04
NEDD1-202ENST00000411739 CRISP2P16562 243 aa8.53□□□□□ -1.04
NEDD1-202ENST00000411739 KLK5Q9Y337 293 aaPredicted RBP8.53□□□□□ -1.04
NEDD1-202ENST00000411739 DEFB131BA0A096LNP1 70 aa8.52□□□□□ -1.05
NEDD1-202ENST00000411739 TRAV34A0A0B4J273 112 aa8.52□□□□□ -1.05
NEDD1-202ENST00000411739 TCRAP04437 139 aa8.52□□□□□ -1.05
NEDD1-202ENST00000411739 MUC21Q5SSG8 566 aa8.52□□□□□ -1.05
NEDD1-202ENST00000411739 C5orf17Q8NAS9 161 aa8.52□□□□□ -1.05
NEDD1-202ENST00000411739 RNASE8Q8TDE3 154 aaKnown RBP8.52□□□□□ -1.05
NEDD1-202ENST00000411739 EPDR1Q9UM22 224 aa8.52□□□□□ -1.05
NEDD1-202ENST00000411739 LYSTQ99698 3801 aa8.52□□□□□ -1.05
NEDD1-202ENST00000411739 DAD1P61803 113 aa8.52□□□□□ -1.05
NEDD1-202ENST00000411739 C9orf62Q8N4C0 152 aa8.52□□□□□ -1.05
NEDD1-202ENST00000411739 C2CD4CQ8TF44 421 aa8.52□□□□□ -1.05
NEDD1-202ENST00000411739 TRAV10A0A0B4J240 114 aa8.51□□□□□ -1.05
NEDD1-202ENST00000411739 FAM74A7A6NL05 159 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms