RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 A0A0U1RRA0 63 aa7.22□□□□□ -1.25
PBRM1-208ENST00000410007 CENPVL3A0A0U1RRI6 287 aa7.22□□□□□ -1.25
PBRM1-208ENST00000410007 S100A7L2Q5SY68 101 aa7.22□□□□□ -1.25
PBRM1-208ENST00000410007 NDUFAF3Q9BU61 184 aa7.22□□□□□ -1.25
PBRM1-208ENST00000410007 IGHV4-39P01824 125 aa7.21□□□□□ -1.25
PBRM1-208ENST00000410007 HSD52Q0P140 79 aa7.21□□□□□ -1.25
PBRM1-208ENST00000410007 SS18Q15532 418 aa7.21□□□□□ -1.25
PBRM1-208ENST00000410007 C6orf226Q5I0X4 101 aa7.21□□□□□ -1.25
PBRM1-208ENST00000410007 PRR25Q96S07 402 aa7.21□□□□□ -1.25
PBRM1-208ENST00000410007 IGHV4-30-2A0A087WSY4 118 aa7.21□□□□□ -1.26
PBRM1-208ENST00000410007 FBXL19-AS1Q494R0 122 aa7.21□□□□□ -1.26
PBRM1-208ENST00000410007 C10orf105Q8TEF2 133 aa7.21□□□□□ -1.26
PBRM1-208ENST00000410007 TSSC4Q9Y5U2 329 aaPredicted RBP7.21□□□□□ -1.26
PBRM1-208ENST00000410007 PRSS46E5RG02 174 aa7.21□□□□□ -1.26
PBRM1-208ENST00000410007 PAX2Q02962 417 aa7.21□□□□□ -1.26
PBRM1-208ENST00000410007 LY6G5BQ8NDX9 201 aa7.21□□□□□ -1.26
PBRM1-208ENST00000410007 ORAOV1Q8WV07 137 aa7.21□□□□□ -1.26
PBRM1-208ENST00000410007 PHLDA1Q8WV24 401 aaPredicted RBP7.21□□□□□ -1.26
PBRM1-208ENST00000410007 JPT2Q9H910 190 aa7.2□□□□□ -1.26
PBRM1-208ENST00000410007 IGLC7A0M8Q6 106 aa7.2□□□□□ -1.26
PBRM1-208ENST00000410007 F5H768 121 aa7.2□□□□□ -1.26
PBRM1-208ENST00000410007 H3BUT2 72 aa7.2□□□□□ -1.26
PBRM1-208ENST00000410007 TNFRSF6BO95407 300 aa7.2□□□□□ -1.26
PBRM1-208ENST00000410007 TYMSP04818 313 aa7.2□□□□□ -1.26
PBRM1-208ENST00000410007 TTC32Q5I0X7 151 aa7.2□□□□□ -1.26
PBRM1-208ENST00000410007 SEM1Q6ZVN7 128 aa7.2□□□□□ -1.26
PBRM1-208ENST00000410007 ATP6V0BQ99437 205 aa7.2□□□□□ -1.26
PBRM1-208ENST00000410007 ANKHD1Q8IWZ3 2542 aaKnown RBP7.2□□□□□ -1.26
PBRM1-208ENST00000410007 DENND4CQ5VZ89 1909 aa7.2□□□□□ -1.26
PBRM1-208ENST00000410007 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.2□□□□□ -1.26
PBRM1-208ENST00000410007 WIPF3A6NGB9 483 aa7.2□□□□□ -1.26
PBRM1-208ENST00000410007 SMKR1H3BMG3 65 aa7.2□□□□□ -1.26
PBRM1-208ENST00000410007 PGPEP1Q9NXJ5 209 aa7.2□□□□□ -1.26
PBRM1-208ENST00000410007 GGTLC3B5MD39 225 aa7.2□□□□□ -1.26
PBRM1-208ENST00000410007 FAM231DQ6ZW35 169 aa7.2□□□□□ -1.26
PBRM1-208ENST00000410007 HAPLN4Q86UW8 402 aa7.2□□□□□ -1.26
PBRM1-208ENST00000410007 ZNF491Q8N8L2 437 aa7.2□□□□□ -1.26
PBRM1-208ENST00000410007 TRAV13-1A0A0B4J241 112 aa7.19□□□□□ -1.26
PBRM1-208ENST00000410007 KNCNA6PVL3 124 aa7.19□□□□□ -1.26
PBRM1-208ENST00000410007 C8orf49Q96NF6 230 aa7.19□□□□□ -1.26
PBRM1-208ENST00000410007 FGF23Q9GZV9 251 aaPredicted RBP7.19□□□□□ -1.26
PBRM1-208ENST00000410007 KLK9Q9UKQ9 250 aa7.19□□□□□ -1.26
PBRM1-208ENST00000410007 MED13Q9UHV7 2174 aa7.19□□□□□ -1.26
PBRM1-208ENST00000410007 LGALS1P09382 135 aaKnown RBP7.19□□□□□ -1.26
PBRM1-208ENST00000410007 PRR31Q5SQ13 230 aa7.19□□□□□ -1.26
PBRM1-208ENST00000410007 TMEM256Q8N2U0 113 aa7.19□□□□□ -1.26
PBRM1-208ENST00000410007 LTBP2Q14767 1821 aa7.19□□□□□ -1.26
PBRM1-208ENST00000410007 M0R2P5 195 aa7.19□□□□□ -1.26
PBRM1-208ENST00000410007 PAX4O43316 350 aa7.19□□□□□ -1.26
PBRM1-208ENST00000410007 A0A1B0GUS0 222 aa7.19□□□□□ -1.26
PBRM1-208ENST00000410007 A0A1B0GV90 55 aa7.19□□□□□ -1.26
PBRM1-208ENST00000410007 AZU1P20160 251 aa7.19□□□□□ -1.26
PBRM1-208ENST00000410007 SPRNQ5BIV9 151 aa7.19□□□□□ -1.26
PBRM1-208ENST00000410007 FAM104BQ5XKR9 115 aa7.19□□□□□ -1.26
PBRM1-208ENST00000410007 DEFB104AQ8WTQ1 72 aa7.19□□□□□ -1.26
PBRM1-208ENST00000410007 MYMXA0A1B0GTQ4 84 aa7.18□□□□□ -1.26
PBRM1-208ENST00000410007 PRR20EP86478 221 aa7.18□□□□□ -1.26
PBRM1-208ENST00000410007 PRR20CP86479 221 aa7.18□□□□□ -1.26
PBRM1-208ENST00000410007 PRR20DP86480 221 aa7.18□□□□□ -1.26
PBRM1-208ENST00000410007 PRR20BP86481 221 aa7.18□□□□□ -1.26
PBRM1-208ENST00000410007 PRR20AP86496 221 aa7.18□□□□□ -1.26
PBRM1-208ENST00000410007 SPXQ9BT56 116 aa7.18□□□□□ -1.26
PBRM1-208ENST00000410007 CST9LQ9H4G1 147 aa7.18□□□□□ -1.26
PBRM1-208ENST00000410007 ERG28Q9UKR5 140 aa7.18□□□□□ -1.26
PBRM1-208ENST00000410007 TMEM213A2RRL7 107 aa7.18□□□□□ -1.26
PBRM1-208ENST00000410007 GAGE12JA6NER3 117 aa7.18□□□□□ -1.26
PBRM1-208ENST00000410007 SYS1-DBNDD2H3BUS1 97 aa7.18□□□□□ -1.26
PBRM1-208ENST00000410007 TSPAN13O95857 204 aa7.18□□□□□ -1.26
PBRM1-208ENST00000410007 GAGE1Q13065 139 aa7.18□□□□□ -1.26
PBRM1-208ENST00000410007 GAGE4Q13068 117 aa7.18□□□□□ -1.26
PBRM1-208ENST00000410007 GAGE5Q13069 117 aa7.18□□□□□ -1.26
PBRM1-208ENST00000410007 FOXE3Q13461 319 aa7.18□□□□□ -1.26
PBRM1-208ENST00000410007 GAGE13Q4V321 117 aa7.18□□□□□ -1.26
PBRM1-208ENST00000410007 NPBQ8NG41 125 aa7.18□□□□□ -1.26
PBRM1-208ENST00000410007 C11orf68Q9H3H3 251 aaKnown RBP7.18□□□□□ -1.26
PBRM1-208ENST00000410007 PIEZO1Q92508 2521 aa7.18□□□□□ -1.26
PBRM1-208ENST00000410007 TRBV25-1A0A075B6N4 114 aa7.18□□□□□ -1.26
PBRM1-208ENST00000410007 C3orf79P0CE67 100 aa7.18□□□□□ -1.26
PBRM1-208ENST00000410007 ZNF726P1Q15940 193 aa7.18□□□□□ -1.26
PBRM1-208ENST00000410007 ANXA2RQ3ZCQ2 193 aa7.18□□□□□ -1.26
PBRM1-208ENST00000410007 DMRTA1Q5VZB9 504 aa7.18□□□□□ -1.26
PBRM1-208ENST00000410007 LOC105371267A0A1B0GV96 52 aa7.18□□□□□ -1.26
PBRM1-208ENST00000410007 HOXD3P31249 432 aaPredicted RBP7.18□□□□□ -1.26
PBRM1-208ENST00000410007 SSBP2P81877 361 aaPredicted RBP7.18□□□□□ -1.26
PBRM1-208ENST00000410007 FNDC4Q9H6D8 234 aaPredicted RBP7.18□□□□□ -1.26
PBRM1-208ENST00000410007 KIF26AQ9ULI4 1882 aaPredicted RBP7.18□□□□□ -1.26
PBRM1-208ENST00000410007 ZC2HC1BQ5TFG8 222 aa7.17□□□□□ -1.26
PBRM1-208ENST00000410007 FOXI2Q6ZQN5 318 aa7.17□□□□□ -1.26
PBRM1-208ENST00000410007 FXYD5Q96DB9 178 aa7.17□□□□□ -1.26
PBRM1-208ENST00000410007 TIMM21Q9BVV7 248 aa7.17□□□□□ -1.26
PBRM1-208ENST00000410007 GAGE12BA1L429 117 aa7.17□□□□□ -1.26
PBRM1-208ENST00000410007 CCL24O00175 119 aa7.17□□□□□ -1.26
PBRM1-208ENST00000410007 GAGE7O76087 117 aa7.17□□□□□ -1.26
PBRM1-208ENST00000410007 GAGE12FP0CL80 117 aa7.17□□□□□ -1.26
PBRM1-208ENST00000410007 GAGE12GP0CL81 117 aa7.17□□□□□ -1.26
PBRM1-208ENST00000410007 GAGE12IP0CL82 117 aa7.17□□□□□ -1.26
PBRM1-208ENST00000410007 IGHV4-38-2P0DP08 117 aa7.17□□□□□ -1.26
PBRM1-208ENST00000410007 Q8NA96 180 aa7.17□□□□□ -1.26
PBRM1-208ENST00000410007 C11orf52Q96A22 123 aa7.17□□□□□ -1.26
PBRM1-208ENST00000410007 I3L3M4 83 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms