RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 MINOS1-NBL1R4GNA1 71 aa2.84□□□□□ -1.95
LSM5-206ENST00000409987 CSMD1Q96PZ7 3565 aa2.84□□□□□ -1.95
LSM5-206ENST00000409987 NF1P21359 2839 aa2.83□□□□□ -1.96
LSM5-206ENST00000409987 SETD2Q9BYW2 2564 aaPredicted RBP2.83□□□□□ -1.96
LSM5-206ENST00000409987 TRAV7A0A075B6U4 112 aa2.83□□□□□ -1.96
LSM5-206ENST00000409987 SPRR5A0A1B0GTR4 108 aa2.83□□□□□ -1.96
LSM5-206ENST00000409987 MEIS3P1A6NDR6 274 aa2.83□□□□□ -1.96
LSM5-206ENST00000409987 KRTAP10-8P60410 259 aa2.83□□□□□ -1.96
LSM5-206ENST00000409987 SUPT4H1P63272 117 aaKnown RBP2.83□□□□□ -1.96
LSM5-206ENST00000409987 C22orf39Q6P5X5 142 aa2.83□□□□□ -1.96
LSM5-206ENST00000409987 LYZL1Q6UWQ5 148 aa2.83□□□□□ -1.96
LSM5-206ENST00000409987 DEFB128Q7Z7B8 93 aa2.83□□□□□ -1.96
LSM5-206ENST00000409987 MSRB3Q8IXL7 192 aa2.83□□□□□ -1.96
LSM5-206ENST00000409987 Q8NDZ9 215 aa2.83□□□□□ -1.96
LSM5-206ENST00000409987 TMEM106AQ96A25 262 aa2.83□□□□□ -1.96
LSM5-206ENST00000409987 ZNF471Q9BX82 626 aaPredicted RBP2.83□□□□□ -1.96
LSM5-206ENST00000409987 NAT8BQ9UHF3 227 aa2.83□□□□□ -1.96
LSM5-206ENST00000409987 EPDR1Q9UM22 224 aa2.83□□□□□ -1.96
LSM5-206ENST00000409987 HSPE1-MOB4S4R3N1 261 aa2.83□□□□□ -1.96
LSM5-206ENST00000409987 PHIPQ8WWQ0 1821 aa2.83□□□□□ -1.96
LSM5-206ENST00000409987 CREBBPQ92793 2442 aa2.83□□□□□ -1.96
LSM5-206ENST00000409987 LRBAP50851 2863 aa2.82□□□□□ -1.96
LSM5-206ENST00000409987 C2CD3Q4AC94 2353 aa2.82□□□□□ -1.96
LSM5-206ENST00000409987 IGLV2-18A0A075B6J9 118 aa2.82□□□□□ -1.96
LSM5-206ENST00000409987 TRGV10A0A0A0MS01 117 aa2.82□□□□□ -1.96
LSM5-206ENST00000409987 C5orf67F2Z3F1 127 aa2.82□□□□□ -1.96
LSM5-206ENST00000409987 C3orf84H3BNL1 204 aa2.82□□□□□ -1.96
LSM5-206ENST00000409987 CST7O76096 145 aa2.82□□□□□ -1.96
LSM5-206ENST00000409987 TCL1BO95988 128 aa2.82□□□□□ -1.96
LSM5-206ENST00000409987 SCTP09683 121 aa2.82□□□□□ -1.96
LSM5-206ENST00000409987 CMPK1P30085 196 aa2.82□□□□□ -1.96
LSM5-206ENST00000409987 DYNLT3P51808 116 aa2.82□□□□□ -1.96
LSM5-206ENST00000409987 SLC38A11Q08AI6 406 aa2.82□□□□□ -1.96
LSM5-206ENST00000409987 MORN2Q502X0 79 aa2.82□□□□□ -1.96
LSM5-206ENST00000409987 Q6ZS52 159 aa2.82□□□□□ -1.96
LSM5-206ENST00000409987 OR8I2Q8N0Y5 310 aa2.82□□□□□ -1.96
LSM5-206ENST00000409987 LRRC18Q8N456 261 aa2.82□□□□□ -1.96
LSM5-206ENST00000409987 OR2T10Q8NGZ9 312 aa2.82□□□□□ -1.96
LSM5-206ENST00000409987 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
LSM5-206ENST00000409987 CACYBPQ9HB71 228 aaKnown RBP2.82□□□□□ -1.96
LSM5-206ENST00000409987 POPDC3Q9HBV1 291 aa2.82□□□□□ -1.96
LSM5-206ENST00000409987 RNF11Q9Y3C5 154 aa2.82□□□□□ -1.96
LSM5-206ENST00000409987 SPENQ96T58 3664 aaKnown RBP2.82□□□□□ -1.96
LSM5-206ENST00000409987 FLNCQ14315 2725 aa2.82□□□□□ -1.96
LSM5-206ENST00000409987 LOC285556D6RIA3 1793 aa2.82□□□□□ -1.96
LSM5-206ENST00000409987 COL27A1Q8IZC6 1860 aaPredicted RBP2.82□□□□□ -1.96
LSM5-206ENST00000409987 POLQO75417 2590 aa2.81□□□□□ -1.96
LSM5-206ENST00000409987 TRAV5A0A0B4J249 113 aa2.81□□□□□ -1.96
LSM5-206ENST00000409987 ODAMA1E959 279 aa2.81□□□□□ -1.96
LSM5-206ENST00000409987 C9JAW5 83 aa2.81□□□□□ -1.96
LSM5-206ENST00000409987 H7C2G1 150 aa2.81□□□□□ -1.96
LSM5-206ENST00000409987 LYZL6O75951 148 aa2.81□□□□□ -1.96
LSM5-206ENST00000409987 TNFSF15O95150 251 aa2.81□□□□□ -1.96
LSM5-206ENST00000409987 UBBP0CG47 229 aa2.81□□□□□ -1.96
LSM5-206ENST00000409987 MPC1LP0DKB6 136 aa2.81□□□□□ -1.96
LSM5-206ENST00000409987 SDC4P31431 198 aa2.81□□□□□ -1.96
LSM5-206ENST00000409987 FXYD2P54710 66 aa2.81□□□□□ -1.96
LSM5-206ENST00000409987 DEFB103AP81534 67 aa2.81□□□□□ -1.96
LSM5-206ENST00000409987 RHOGP84095 191 aa2.81□□□□□ -1.96
LSM5-206ENST00000409987 PABPC1L2AQ5JQF8 200 aa2.81□□□□□ -1.96
LSM5-206ENST00000409987 IGFL1Q6UW32 110 aa2.81□□□□□ -1.96
LSM5-206ENST00000409987 DPPA3Q6W0C5 159 aa2.81□□□□□ -1.96
LSM5-206ENST00000409987 SLC35E3Q7Z769 313 aa2.81□□□□□ -1.96
LSM5-206ENST00000409987 RNASE11Q8TAA1 199 aaKnown RBP2.81□□□□□ -1.96
LSM5-206ENST00000409987 TCEAL2Q9H3H9 227 aaPredicted RBP2.81□□□□□ -1.96
LSM5-206ENST00000409987 MRPL16Q9NX20 251 aaKnown RBP2.81□□□□□ -1.96
LSM5-206ENST00000409987 HIGD1AQ9Y241 93 aa2.81□□□□□ -1.96
LSM5-206ENST00000409987 MYH3P11055 1940 aa2.81□□□□□ -1.96
LSM5-206ENST00000409987 ITPR2Q14571 2701 aa2.81□□□□□ -1.96
LSM5-206ENST00000409987 BOD1L1Q8NFC6 3051 aa2.81□□□□□ -1.96
LSM5-206ENST00000409987 KIF26AQ9ULI4 1882 aaPredicted RBP2.8□□□□□ -1.96
LSM5-206ENST00000409987 A0A0D9SG52 128 aa2.8□□□□□ -1.96
LSM5-206ENST00000409987 A0A0J9YX75 114 aa2.8□□□□□ -1.96
LSM5-206ENST00000409987 TRBV10-2A0A0K0K1G8 114 aa2.8□□□□□ -1.96
LSM5-206ENST00000409987 RFPL4AA6NLU0 287 aa2.8□□□□□ -1.96
LSM5-206ENST00000409987 RFPL4AL1F8VTS6 287 aa2.8□□□□□ -1.96
LSM5-206ENST00000409987 CXCL1P09341 107 aa2.8□□□□□ -1.96
LSM5-206ENST00000409987 TMBIM6P55061 237 aa2.8□□□□□ -1.96
LSM5-206ENST00000409987 NDUFA6P56556 154 aa2.8□□□□□ -1.96
LSM5-206ENST00000409987 MSMO1Q15800 293 aa2.8□□□□□ -1.96
LSM5-206ENST00000409987 KRTAP13-2Q52LG2 175 aa2.8□□□□□ -1.96
LSM5-206ENST00000409987 KHDC3LQ587J8 217 aa2.8□□□□□ -1.96
LSM5-206ENST00000409987 PHF5AQ7RTV0 110 aaKnown RBP2.8□□□□□ -1.96
LSM5-206ENST00000409987 TCTE3Q8IZS6 198 aa2.8□□□□□ -1.96
LSM5-206ENST00000409987 LXNQ9BS40 222 aa2.8□□□□□ -1.96
LSM5-206ENST00000409987 ADAT1Q9BUB4 502 aaKnown RBP2.8□□□□□ -1.96
LSM5-206ENST00000409987 HHLA3Q9XRX5 114 aa2.8□□□□□ -1.96
LSM5-206ENST00000409987 TET1Q8NFU7 2136 aa2.8□□□□□ -1.96
LSM5-206ENST00000409987 ATG2BQ96BY7 2078 aa2.8□□□□□ -1.96
LSM5-206ENST00000409987 SIPA1L1O43166 1804 aa2.79□□□□□ -1.96
LSM5-206ENST00000409987 ZNF236Q9UL36 1845 aa2.79□□□□□ -1.96
LSM5-206ENST00000409987 CENPEQ02224 2701 aa2.79□□□□□ -1.96
LSM5-206ENST00000409987 C7orf71A4D174 169 aa2.79□□□□□ -1.96
LSM5-206ENST00000409987 J3QKU1 62 aa2.79□□□□□ -1.96
LSM5-206ENST00000409987 K7EP13 123 aa2.79□□□□□ -1.96
LSM5-206ENST00000409987 NDUFB3O43676 98 aa2.79□□□□□ -1.96
LSM5-206ENST00000409987 SULT1C4O75897 302 aa2.79□□□□□ -1.96
LSM5-206ENST00000409987 DPM2O94777 84 aa2.79□□□□□ -1.96
LSM5-206ENST00000409987 NAPSAO96009 420 aa2.79□□□□□ -1.96
LSM5-206ENST00000409987 C1QCP02747 245 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms