RNA–Protein interactions for RNA: ENST00000409958.6

VSX1-204, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-204ENST00000409958 PRM2P04554 102 aa14.84□□□□□ -0.03
VSX1-204ENST00000409958 ZNF345Q14585 488 aa14.84□□□□□ -0.03
VSX1-204ENST00000409958 TMEM78Q5T7P6 136 aa14.84□□□□□ -0.03
VSX1-204ENST00000409958 ZNF767PQ75MW2 155 aa14.84□□□□□ -0.03
VSX1-204ENST00000409958 RAB24Q969Q5 203 aa14.84□□□□□ -0.03
VSX1-204ENST00000409958 FAM19A4Q96LR4 140 aa14.84□□□□□ -0.03
VSX1-204ENST00000409958 OTORQ9NRC9 128 aa14.84□□□□□ -0.03
VSX1-204ENST00000409958 CYTL1Q9NRR1 136 aa14.84□□□□□ -0.03
VSX1-204ENST00000409958 HMSDA8MTL9 139 aa14.83□□□□□ -0.04
VSX1-204ENST00000409958 ARL14EPLP0DKL9 152 aa14.83□□□□□ -0.04
VSX1-204ENST00000409958 KCNRGQ8N5I3 272 aa14.83□□□□□ -0.04
VSX1-204ENST00000409958 RXFP4Q8TDU9 374 aa14.83□□□□□ -0.04
VSX1-204ENST00000409958 VGLL1Q99990 258 aa14.83□□□□□ -0.04
VSX1-204ENST00000409958 ACTR3CQ9C0K3 210 aaPredicted RBP14.83□□□□□ -0.04
VSX1-204ENST00000409958 RBAKDNA6NC62 111 aa14.82□□□□□ -0.04
VSX1-204ENST00000409958 J3KRW8 73 aa14.82□□□□□ -0.04
VSX1-204ENST00000409958 SLC25A5P05141 298 aaKnown RBP14.82□□□□□ -0.04
VSX1-204ENST00000409958 CRISP2P16562 243 aa14.82□□□□□ -0.04
VSX1-204ENST00000409958 AZU1P20160 251 aa14.82□□□□□ -0.04
VSX1-204ENST00000409958 FAM74A1Q5RGS3 127 aa14.82□□□□□ -0.04
VSX1-204ENST00000409958 OR11H4Q8NGC9 324 aa14.82□□□□□ -0.04
VSX1-204ENST00000409958 NIPSNAP3BQ9BS92 247 aa14.82□□□□□ -0.04
VSX1-204ENST00000409958 ZNF492Q9P255 531 aa14.82□□□□□ -0.04
VSX1-204ENST00000409958 ALMS1Q8TCU4 4167 aa14.82□□□□□ -0.04
VSX1-204ENST00000409958 PGPA6NDG6 321 aa14.81□□□□□ -0.04
VSX1-204ENST00000409958 KLLNB2CW77 178 aa14.81□□□□□ -0.04
VSX1-204ENST00000409958 NMBP08949 121 aa14.81□□□□□ -0.04
VSX1-204ENST00000409958 TCTAP57738 103 aa14.81□□□□□ -0.04
VSX1-204ENST00000409958 SUN5Q8TC36 379 aa14.81□□□□□ -0.04
VSX1-204ENST00000409958 ARPC5LQ9BPX5 153 aa14.81□□□□□ -0.04
VSX1-204ENST00000409958 DEFB131BA0A096LNP1 70 aa14.8□□□□□ -0.04
VSX1-204ENST00000409958 TRAV12-3A0A0B4J271 114 aa14.8□□□□□ -0.04
VSX1-204ENST00000409958 TRBV7-9A0A0J9YWB2 115 aa14.8□□□□□ -0.04
VSX1-204ENST00000409958 PLAC8L1A1L4L8 177 aa14.8□□□□□ -0.04
VSX1-204ENST00000409958 C7orf71A4D174 169 aa14.8□□□□□ -0.04
VSX1-204ENST00000409958 DIRC3C9JPN6 131 aa14.8□□□□□ -0.04
VSX1-204ENST00000409958 HTN1P15515 57 aa14.8□□□□□ -0.04
VSX1-204ENST00000409958 ZNF138P52744 262 aa14.8□□□□□ -0.04
VSX1-204ENST00000409958 ZNF493Q6ZR52 646 aa14.8□□□□□ -0.04
VSX1-204ENST00000409958 ARL6IP6Q8N6S5 226 aa14.8□□□□□ -0.04
VSX1-204ENST00000409958 CMTM2Q8TAZ6 248 aa14.8□□□□□ -0.04
VSX1-204ENST00000409958 LINC00476Q8WZB0 136 aa14.8□□□□□ -0.04
VSX1-204ENST00000409958 C16orf74Q96GX8 76 aa14.8□□□□□ -0.04
VSX1-204ENST00000409958 DNAH1Q9P2D7 4330 aa14.79□□□□□ -0.04
VSX1-204ENST00000409958 A0A0D9SG52 128 aa14.79□□□□□ -0.04
VSX1-204ENST00000409958 LYRM9A8MSI8 78 aa14.79□□□□□ -0.04
VSX1-204ENST00000409958 IGLL5B9A064 214 aa14.79□□□□□ -0.04
VSX1-204ENST00000409958 CXorf1O96002 111 aa14.79□□□□□ -0.04
VSX1-204ENST00000409958 GCHFRP30047 84 aa14.79□□□□□ -0.04
VSX1-204ENST00000409958 Q6ZNX1 250 aa14.79□□□□□ -0.04
VSX1-204ENST00000409958 RNASE8Q8TDE3 154 aaKnown RBP14.79□□□□□ -0.04
VSX1-204ENST00000409958 TMEM263Q8WUH6 116 aaKnown RBP14.79□□□□□ -0.04
VSX1-204ENST00000409958 HYLS1Q96M11 299 aa14.79□□□□□ -0.04
VSX1-204ENST00000409958 AKR1C8PQ5T2L2 129 aa14.78□□□□□ -0.04
VSX1-204ENST00000409958 CCDC28AQ8IWP9 274 aa14.78□□□□□ -0.04
VSX1-204ENST00000409958 ZFAND2AQ8N6M9 145 aa14.78□□□□□ -0.04
VSX1-204ENST00000409958 PYGO2Q9BRQ0 406 aa14.78□□□□□ -0.04
VSX1-204ENST00000409958 TMEM167BQ9NRX6 74 aa14.78□□□□□ -0.04
VSX1-204ENST00000409958 PLA2G2EQ9NZK7 142 aa14.78□□□□□ -0.04
VSX1-204ENST00000409958 CTXND1A0A1B0GTU2 59 aa14.77□□□□□ -0.04
VSX1-204ENST00000409958 ZNF324O75467 553 aaPredicted RBP14.77□□□□□ -0.04
VSX1-204ENST00000409958 GPX1P07203 203 aa14.77□□□□□ -0.04
VSX1-204ENST00000409958 DAD1P61803 113 aa14.77□□□□□ -0.04
VSX1-204ENST00000409958 CD300CQ08708 224 aa14.77□□□□□ -0.04
VSX1-204ENST00000409958 SSX7Q7RTT5 188 aa14.77□□□□□ -0.04
VSX1-204ENST00000409958 RNASE4P34096 147 aaKnown RBP14.76□□□□□ -0.05
VSX1-204ENST00000409958 BTN1A1Q13410 526 aa14.76□□□□□ -0.05
VSX1-204ENST00000409958 ZNF726P1Q15940 193 aa14.76□□□□□ -0.05
VSX1-204ENST00000409958 Q8TAT8 98 aa14.76□□□□□ -0.05
VSX1-204ENST00000409958 TMED6Q8WW62 240 aa14.76□□□□□ -0.05
VSX1-204ENST00000409958 ST6GAL2Q96JF0 529 aa14.76□□□□□ -0.05
VSX1-204ENST00000409958 TIMM8BQ9Y5J9 83 aaPredicted RBP14.76□□□□□ -0.05
VSX1-204ENST00000409958 LENEPQ9Y5L5 61 aa14.76□□□□□ -0.05
VSX1-204ENST00000409958 IGHV4-4A0A075B6R2 117 aa14.75□□□□□ -0.05
VSX1-204ENST00000409958 LY6G6CO95867 125 aa14.75□□□□□ -0.05
VSX1-204ENST00000409958 LINC00467Q9BRT7 94 aa14.75□□□□□ -0.05
VSX1-204ENST00000409958 APLNQ9ULZ1 77 aa14.75□□□□□ -0.05
VSX1-204ENST00000409958 KANTRA0A1W2PQU2 76 aa14.74□□□□□ -0.05
VSX1-204ENST00000409958 BCL2L11O43521 198 aa14.74□□□□□ -0.05
VSX1-204ENST00000409958 PRR9Q5T870 116 aa14.74□□□□□ -0.05
VSX1-204ENST00000409958 GOLT1AQ6ZVE7 132 aa14.74□□□□□ -0.05
VSX1-204ENST00000409958 RPH3ALQ9UNE2 315 aa14.74□□□□□ -0.05
VSX1-204ENST00000409958 LGALS9CQ6DKI2 356 aa14.73□□□□□ -0.05
VSX1-204ENST00000409958 TCTE3Q8IZS6 198 aa14.73□□□□□ -0.05
VSX1-204ENST00000409958 ZNF471Q9BX82 626 aaPredicted RBP14.73□□□□□ -0.05
VSX1-204ENST00000409958 SERTM2A0A1B0GWG4 89 aa14.72□□□□□ -0.05
VSX1-204ENST00000409958 SEC11BP0C7V7 166 aa14.72□□□□□ -0.05
VSX1-204ENST00000409958 DEFB130BP0DP73 79 aa14.72□□□□□ -0.05
VSX1-204ENST00000409958 DEFB130AP0DP74 79 aa14.72□□□□□ -0.05
VSX1-204ENST00000409958 GNG5P63218 68 aa14.72□□□□□ -0.05
VSX1-204ENST00000409958 IQCF2Q8IXL9 164 aa14.72□□□□□ -0.05
VSX1-204ENST00000409958 C5orf17Q8NAS9 161 aa14.72□□□□□ -0.05
VSX1-204ENST00000409958 FAM210BQ96KR6 192 aa14.72□□□□□ -0.05
VSX1-204ENST00000409958 NOP10Q9NPE3 64 aaKnown RBP14.72□□□□□ -0.05
VSX1-204ENST00000409958 HYDINQ4G0P3 5121 aa14.72□□□□□ -0.05
VSX1-204ENST00000409958 A0A1W2PRE2 83 aa14.71□□□□□ -0.05
VSX1-204ENST00000409958 EIF5AP63241 154 aaKnown RBP14.71□□□□□ -0.05
VSX1-204ENST00000409958 ANXA2RQ3ZCQ2 193 aa14.71□□□□□ -0.05
VSX1-204ENST00000409958 TMUB2Q71RG4 321 aa14.71□□□□□ -0.05
VSX1-204ENST00000409958 EIF4E3Q8N5X7 224 aaKnown RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms