RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 SCGB1C1Q8TD33 95 aa10.25□□□□□ -0.77
NIF3L1-205ENST00000409588 ATP5SQ99766 215 aa10.25□□□□□ -0.77
NIF3L1-205ENST00000409588 LINC00467Q9BRT7 94 aa10.25□□□□□ -0.77
NIF3L1-205ENST00000409588 FUT9Q9Y231 359 aa10.25□□□□□ -0.77
NIF3L1-205ENST00000409588 FRAS1Q86XX4 4008 aa10.25□□□□□ -0.77
NIF3L1-205ENST00000409588 SNURFLB1AK76 121 aa10.24□□□□□ -0.77
NIF3L1-205ENST00000409588 F5H768 121 aa10.24□□□□□ -0.77
NIF3L1-205ENST00000409588 DAZ2Q13117 558 aaKnown RBP10.24□□□□□ -0.77
NIF3L1-205ENST00000409588 CLINT1Q14677 625 aa10.24□□□□□ -0.77
NIF3L1-205ENST00000409588 SOHLH1Q5JUK2 328 aa10.24□□□□□ -0.77
NIF3L1-205ENST00000409588 LINC00612Q8N6U2 182 aa10.24□□□□□ -0.77
NIF3L1-205ENST00000409588 ZNF680Q8NEM1 530 aa10.24□□□□□ -0.77
NIF3L1-205ENST00000409588 BLNKQ8WV28 456 aa10.24□□□□□ -0.77
NIF3L1-205ENST00000409588 ZNF503Q96F45 646 aa10.24□□□□□ -0.77
NIF3L1-205ENST00000409588 FAM167A-AS1Q96KT0 104 aa10.24□□□□□ -0.77
NIF3L1-205ENST00000409588 SLC25A2Q9BXI2 301 aa10.24□□□□□ -0.77
NIF3L1-205ENST00000409588 PARD6GQ9BYG4 376 aaPredicted RBP10.24□□□□□ -0.77
NIF3L1-205ENST00000409588 NOP10Q9NPE3 64 aaKnown RBP10.24□□□□□ -0.77
NIF3L1-205ENST00000409588 TRAV12-3A0A0B4J271 114 aa10.23□□□□□ -0.77
NIF3L1-205ENST00000409588 KLLNB2CW77 178 aa10.23□□□□□ -0.77
NIF3L1-205ENST00000409588 PYYP10082 97 aa10.23□□□□□ -0.77
NIF3L1-205ENST00000409588 CRISP2P16562 243 aa10.23□□□□□ -0.77
NIF3L1-205ENST00000409588 RPL12P30050 165 aaKnown RBP10.23□□□□□ -0.77
NIF3L1-205ENST00000409588 CSN1S1P47710 185 aa10.23□□□□□ -0.77
NIF3L1-205ENST00000409588 TAS2R45P59539 299 aa10.23□□□□□ -0.77
NIF3L1-205ENST00000409588 FCN2Q15485 313 aa10.23□□□□□ -0.77
NIF3L1-205ENST00000409588 TMEM78Q5T7P6 136 aa10.23□□□□□ -0.77
NIF3L1-205ENST00000409588 RNF141Q8WVD5 230 aa10.23□□□□□ -0.77
NIF3L1-205ENST00000409588 FAM19A4Q96LR4 140 aa10.23□□□□□ -0.77
NIF3L1-205ENST00000409588 ATG101Q9BSB4 218 aa10.23□□□□□ -0.77
NIF3L1-205ENST00000409588 PAXXQ9BUH6 204 aa10.23□□□□□ -0.77
NIF3L1-205ENST00000409588 AGPAT4-IT1Q9H0P7 198 aa10.23□□□□□ -0.77
NIF3L1-205ENST00000409588 HSPB11Q9Y547 144 aa10.23□□□□□ -0.77
NIF3L1-205ENST00000409588 C7orf71A4D174 169 aa10.22□□□□□ -0.77
NIF3L1-205ENST00000409588 RBAKDNA6NC62 111 aa10.22□□□□□ -0.77
NIF3L1-205ENST00000409588 H3BNG1 76 aa10.22□□□□□ -0.77
NIF3L1-205ENST00000409588 M0R3E3 92 aa10.22□□□□□ -0.77
NIF3L1-205ENST00000409588 GPX1P07203 203 aa10.22□□□□□ -0.77
NIF3L1-205ENST00000409588 CCL18P55774 89 aa10.22□□□□□ -0.77
NIF3L1-205ENST00000409588 ICAM4Q14773 271 aa10.22□□□□□ -0.77
NIF3L1-205ENST00000409588 ANXA2RQ3ZCQ2 193 aa10.22□□□□□ -0.77
NIF3L1-205ENST00000409588 GCSAMLQ5JQS6 135 aa10.22□□□□□ -0.77
NIF3L1-205ENST00000409588 MIR17HGQ75NE6 70 aa10.22□□□□□ -0.77
NIF3L1-205ENST00000409588 KRTAP9-9Q9BYP9 154 aa10.22□□□□□ -0.77
NIF3L1-205ENST00000409588 KRTAP9-4Q9BYQ2 154 aa10.22□□□□□ -0.77
NIF3L1-205ENST00000409588 DNAH6Q9C0G6 4158 aa10.22□□□□□ -0.77
NIF3L1-205ENST00000409588 DNAH10Q8IVF4 4471 aa10.21□□□□□ -0.77
NIF3L1-205ENST00000409588 ZNF324O75467 553 aaPredicted RBP10.21□□□□□ -0.77
NIF3L1-205ENST00000409588 KIR3DS1Q14943 382 aa10.21□□□□□ -0.77
NIF3L1-205ENST00000409588 Q6ZR54 194 aa10.21□□□□□ -0.77
NIF3L1-205ENST00000409588 EXOC3-AS1Q8N2X6 119 aa10.21□□□□□ -0.77
NIF3L1-205ENST00000409588 ARL6IP6Q8N6S5 226 aa10.21□□□□□ -0.77
NIF3L1-205ENST00000409588 RXFP4Q8TDU9 374 aa10.21□□□□□ -0.77
NIF3L1-205ENST00000409588 FXYD5Q96DB9 178 aa10.21□□□□□ -0.77
NIF3L1-205ENST00000409588 C18orf15Q96N68 181 aa10.21□□□□□ -0.77
NIF3L1-205ENST00000409588 KHDC3LQ587J8 217 aa10.2□□□□□ -0.78
NIF3L1-205ENST00000409588 KRTAP19-1Q8IUB9 90 aa10.2□□□□□ -0.78
NIF3L1-205ENST00000409588 EIF4E3Q8N5X7 224 aaKnown RBP10.2□□□□□ -0.78
NIF3L1-205ENST00000409588 ZNF492Q9P255 531 aa10.2□□□□□ -0.78
NIF3L1-205ENST00000409588 LENEPQ9Y5L5 61 aa10.2□□□□□ -0.78
NIF3L1-205ENST00000409588 OR7C2O60412 319 aa10.19□□□□□ -0.78
NIF3L1-205ENST00000409588 NUDT3O95989 172 aa10.19□□□□□ -0.78
NIF3L1-205ENST00000409588 PTTG1O95997 202 aa10.19□□□□□ -0.78
NIF3L1-205ENST00000409588 M6PRP20645 277 aa10.19□□□□□ -0.78
NIF3L1-205ENST00000409588 ZNF138P52744 262 aa10.19□□□□□ -0.78
NIF3L1-205ENST00000409588 ERCC8Q13216 396 aa10.19□□□□□ -0.78
NIF3L1-205ENST00000409588 FFAR4Q5NUL3 377 aa10.19□□□□□ -0.78
NIF3L1-205ENST00000409588 FAM74A1Q5RGS3 127 aa10.19□□□□□ -0.78
NIF3L1-205ENST00000409588 IBA57Q5T440 356 aaKnown RBP10.19□□□□□ -0.78
NIF3L1-205ENST00000409588 ASB13Q8WXK3 278 aa10.19□□□□□ -0.78
NIF3L1-205ENST00000409588 A0A1W2PPV4 95 aa10.18□□□□□ -0.78
NIF3L1-205ENST00000409588 J3KRW8 73 aa10.18□□□□□ -0.78
NIF3L1-205ENST00000409588 M0R2N4 97 aa10.18□□□□□ -0.78
NIF3L1-205ENST00000409588 PRB4P10163 310 aaPredicted RBP10.18□□□□□ -0.78
NIF3L1-205ENST00000409588 RNASE4P34096 147 aaKnown RBP10.18□□□□□ -0.78
NIF3L1-205ENST00000409588 RANP62826 216 aaKnown RBP10.18□□□□□ -0.78
NIF3L1-205ENST00000409588 OR5I1Q13606 314 aa10.18□□□□□ -0.78
NIF3L1-205ENST00000409588 ACOT6Q3I5F7 207 aaPredicted RBP10.18□□□□□ -0.78
NIF3L1-205ENST00000409588 FAM122CQ6P4D5 195 aa10.18□□□□□ -0.78
NIF3L1-205ENST00000409588 PQLC2Q6ZP29 291 aa10.18□□□□□ -0.78
NIF3L1-205ENST00000409588 TMED6Q8WW62 240 aa10.18□□□□□ -0.78
NIF3L1-205ENST00000409588 GNPNAT1Q96EK6 184 aaPredicted RBP10.18□□□□□ -0.78
NIF3L1-205ENST00000409588 MBD2Q9UBB5 411 aa10.18□□□□□ -0.78
NIF3L1-205ENST00000409588 PRSS29PA6NIE9 313 aa10.17□□□□□ -0.78
NIF3L1-205ENST00000409588 OR10J4P0C629 311 aa10.17□□□□□ -0.78
NIF3L1-205ENST00000409588 ZNF266Q14584 549 aa10.17□□□□□ -0.78
NIF3L1-205ENST00000409588 C1orf134Q5TEV5 83 aa10.17□□□□□ -0.78
NIF3L1-205ENST00000409588 VGLL1Q99990 258 aa10.17□□□□□ -0.78
NIF3L1-205ENST00000409588 GAGE12BA1L429 117 aa10.16□□□□□ -0.78
NIF3L1-205ENST00000409588 RGS13O14921 159 aa10.16□□□□□ -0.78
NIF3L1-205ENST00000409588 RTL8CO15255 209 aa10.16□□□□□ -0.78
NIF3L1-205ENST00000409588 GAGE7O76087 117 aa10.16□□□□□ -0.78
NIF3L1-205ENST00000409588 GAGE12FP0CL80 117 aa10.16□□□□□ -0.78
NIF3L1-205ENST00000409588 GAGE12GP0CL81 117 aa10.16□□□□□ -0.78
NIF3L1-205ENST00000409588 GAGE12IP0CL82 117 aa10.16□□□□□ -0.78
NIF3L1-205ENST00000409588 UBE2L3P68036 154 aaKnown RBP10.16□□□□□ -0.78
NIF3L1-205ENST00000409588 CD300CQ08708 224 aa10.16□□□□□ -0.78
NIF3L1-205ENST00000409588 SLAQ13239 276 aa10.16□□□□□ -0.78
NIF3L1-205ENST00000409588 ZFAND2AQ8N6M9 145 aa10.16□□□□□ -0.78
NIF3L1-205ENST00000409588 C11orf72Q8NBR9 251 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms