RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 KLF12Q9Y4X4 402 aa15.1■□□□□ 0.01
VSX1-203ENST00000409285 SCO2A0A1W2PP80 73 aa15.09■□□□□ 0.01
VSX1-203ENST00000409285 IGHV4-30-4P0DP06 118 aa15.09■□□□□ 0.01
VSX1-203ENST00000409285 LINC00477Q96M19 166 aa15.09■□□□□ 0.01
VSX1-203ENST00000409285 RPH3ALQ9UNE2 315 aa15.09■□□□□ 0.01
VSX1-203ENST00000409285 TRBV7-9A0A0J9YWB2 115 aa15.08■□□□□ 0.01
VSX1-203ENST00000409285 IGLV2-11P01706 119 aa15.08■□□□□ 0.01
VSX1-203ENST00000409285 SRSF3P84103 164 aaKnown RBP15.08■□□□□ 0.01
VSX1-203ENST00000409285 VGLL1Q99990 258 aa15.08■□□□□ 0.01
VSX1-203ENST00000409285 ZNF705DP0CH99 300 aaPredicted RBP15.08■□□□□ 0
VSX1-203ENST00000409285 ZNF705BP0CI00 300 aaPredicted RBP15.08■□□□□ 0
VSX1-203ENST00000409285 TMEM78Q5T7P6 136 aa15.08■□□□□ 0
VSX1-203ENST00000409285 AMTNQ6UX39 209 aa15.08■□□□□ 0
VSX1-203ENST00000409285 FAM19A4Q96LR4 140 aa15.08■□□□□ 0
VSX1-203ENST00000409285 AGPAT4-IT1Q9H0P7 198 aa15.08■□□□□ 0
VSX1-203ENST00000409285 TREM1Q9NP99 234 aa15.08■□□□□ 0
VSX1-203ENST00000409285 LENEPQ9Y5L5 61 aa15.08■□□□□ 0
VSX1-203ENST00000409285 TRBV6-1A0A0K0K1D8 114 aa15.07■□□□□ 0
VSX1-203ENST00000409285 K7EIL1 84 aa15.07■□□□□ 0
VSX1-203ENST00000409285 S100A9P06702 114 aaKnown RBP15.07■□□□□ 0
VSX1-203ENST00000409285 PEA15Q15121 130 aa15.07■□□□□ 0
VSX1-203ENST00000409285 TMEM183BQ1AE95 376 aa15.07■□□□□ 0
VSX1-203ENST00000409285 UQCC3Q6UW78 93 aa15.07■□□□□ 0
VSX1-203ENST00000409285 LINC00322Q6ZN03 302 aaPredicted RBP15.07■□□□□ 0
VSX1-203ENST00000409285 EIF4E3Q8N5X7 224 aaKnown RBP15.07■□□□□ 0
VSX1-203ENST00000409285 FMC1Q96HJ9 113 aa15.07■□□□□ 0
VSX1-203ENST00000409285 ZNF492Q9P255 531 aa15.07■□□□□ 0
VSX1-203ENST00000409285 TRAV8-1A0A0A6YYK1 113 aa15.06■□□□□ 0
VSX1-203ENST00000409285 PRB4P10163 310 aaPredicted RBP15.06■□□□□ 0
VSX1-203ENST00000409285 AKR1C3P42330 323 aa15.06■□□□□ 0
VSX1-203ENST00000409285 ZNF138P52744 262 aa15.06■□□□□ 0
VSX1-203ENST00000409285 MORN3Q6PF18 240 aaPredicted RBP15.06■□□□□ 0
VSX1-203ENST00000409285 OR4B1Q8NGF8 309 aa15.06■□□□□ 0
VSX1-203ENST00000409285 RBMY1BA6NDE4 496 aaKnown RBP15.05■□□□□ -0
VSX1-203ENST00000409285 RBMY1EA6NEQ0 496 aaKnown RBP15.05■□□□□ -0
VSX1-203ENST00000409285 RBMY1DP0C7P1 496 aaKnown RBP15.05■□□□□ -0
VSX1-203ENST00000409285 CT45A10P0DMU9 189 aa15.05■□□□□ -0
VSX1-203ENST00000409285 FLI1Q01543 452 aaPredicted RBP15.05■□□□□ -0
VSX1-203ENST00000409285 ERCC8Q13216 396 aa15.05■□□□□ -0
VSX1-203ENST00000409285 TUBA4BQ9H853 241 aa15.05■□□□□ -0
VSX1-203ENST00000409285 LOC102724200A0A096LPH7 203 aaPredicted RBP15.04■□□□□ -0
VSX1-203ENST00000409285 KIR2DL5BA0A0G2JN68 375 aa15.04■□□□□ -0
VSX1-203ENST00000409285 KIR2DL5BA0A0G2JPC4 375 aa15.04■□□□□ -0
VSX1-203ENST00000409285 SRP19P09132 144 aaKnown RBP15.04■□□□□ -0
VSX1-203ENST00000409285 CRISP2P16562 243 aa15.04■□□□□ -0
VSX1-203ENST00000409285 NUTF2P61970 127 aaKnown RBP15.04■□□□□ -0
VSX1-203ENST00000409285 KIR2DL5AQ8N109 375 aa15.04■□□□□ -0
VSX1-203ENST00000409285 KIR2DL5BQ8NHK3 375 aa15.04■□□□□ -0
VSX1-203ENST00000409285 LINC00479Q96M42 142 aa15.04■□□□□ -0
VSX1-203ENST00000409285 PSG8Q9UQ74 426 aa15.04■□□□□ -0
VSX1-203ENST00000409285 PRB2P02812 416 aaPredicted RBP15.03■□□□□ -0
VSX1-203ENST00000409285 RPL35P42766 123 aaKnown RBP15.03■□□□□ -0
VSX1-203ENST00000409285 UBE2G1P62253 170 aa15.03■□□□□ -0
VSX1-203ENST00000409285 Q86TA4 180 aa15.03■□□□□ -0
VSX1-203ENST00000409285 Q8TAT8 98 aa15.03■□□□□ -0
VSX1-203ENST00000409285 PRKDCP78527 4128 aaKnown RBP15.02■□□□□ -0
VSX1-203ENST00000409285 C9JQL5 133 aa15.02■□□□□ -0
VSX1-203ENST00000409285 TAS2R60P59551 318 aa15.02■□□□□ -0
VSX1-203ENST00000409285 DERL1Q9BUN8 251 aa15.02■□□□□ -0
VSX1-203ENST00000409285 TRAV34A0A0B4J273 112 aa15.01□□□□□ -0.01
VSX1-203ENST00000409285 LTAP01374 205 aa15.01□□□□□ -0.01
VSX1-203ENST00000409285 IGKV3-20P01619 116 aa15.01□□□□□ -0.01
VSX1-203ENST00000409285 AMBPP02760 352 aa15.01□□□□□ -0.01
VSX1-203ENST00000409285 TSPOP30536 169 aa15.01□□□□□ -0.01
VSX1-203ENST00000409285 CDKN1BP46527 198 aa15.01□□□□□ -0.01
VSX1-203ENST00000409285 APOC4P55056 127 aa15.01□□□□□ -0.01
VSX1-203ENST00000409285 SAPCD1Q5SSQ6 148 aa15.01□□□□□ -0.01
VSX1-203ENST00000409285 COX8CQ7Z4L0 72 aa15.01□□□□□ -0.01
VSX1-203ENST00000409285 SLC35B3Q9H1N7 401 aa15.01□□□□□ -0.01
VSX1-203ENST00000409285 ZFP30Q9Y2G7 519 aa15.01□□□□□ -0.01
VSX1-203ENST00000409285 KLLNB2CW77 178 aa15.01□□□□□ -0.01
VSX1-203ENST00000409285 FRMD6-AS1P0C7T7 363 aa15.01□□□□□ -0.01
VSX1-203ENST00000409285 RPL35AP18077 110 aaKnown RBP15.01□□□□□ -0.01
VSX1-203ENST00000409285 LEPP41159 167 aa15.01□□□□□ -0.01
VSX1-203ENST00000409285 SGK494Q96LW2 274 aa15.01□□□□□ -0.01
VSX1-203ENST00000409285 IGF2BP2-AS1Q96M15 143 aa15.01□□□□□ -0.01
VSX1-203ENST00000409285 NDFIP1Q9BT67 221 aa15.01□□□□□ -0.01
VSX1-203ENST00000409285 PARLQ9H300 379 aa15.01□□□□□ -0.01
VSX1-203ENST00000409285 NBEAL2Q6ZNJ1 2754 aa15□□□□□ -0.01
VSX1-203ENST00000409285 CEBPGP53567 150 aa15□□□□□ -0.01
VSX1-203ENST00000409285 PRNTQ86SH4 94 aa15□□□□□ -0.01
VSX1-203ENST00000409285 ZFAND2AQ8N6M9 145 aa15□□□□□ -0.01
VSX1-203ENST00000409285 TVP23CQ96ET8 276 aa15□□□□□ -0.01
VSX1-203ENST00000409285 SMIM12Q96EX1 92 aa15□□□□□ -0.01
VSX1-203ENST00000409285 C1QTNF4Q9BXJ3 329 aa15□□□□□ -0.01
VSX1-203ENST00000409285 CSTL1Q9H114 145 aa15□□□□□ -0.01
VSX1-203ENST00000409285 C9JCJ5 164 aa14.99□□□□□ -0.01
VSX1-203ENST00000409285 UBE2CO00762 179 aa14.99□□□□□ -0.01
VSX1-203ENST00000409285 ATP6V1G1O75348 118 aa14.99□□□□□ -0.01
VSX1-203ENST00000409285 GIG44P09565 113 aaPredicted RBP14.99□□□□□ -0.01
VSX1-203ENST00000409285 SFTA3P0C7M3 94 aa14.99□□□□□ -0.01
VSX1-203ENST00000409285 SPINK13Q1W4C9 94 aa14.99□□□□□ -0.01
VSX1-203ENST00000409285 TRBV20OR9-2A0A075B6H5 130 aa14.98□□□□□ -0.01
VSX1-203ENST00000409285 TMEM183AQ8IXX5 376 aa14.98□□□□□ -0.01
VSX1-203ENST00000409285 MLST8Q9BVC4 326 aa14.98□□□□□ -0.01
VSX1-203ENST00000409285 M0R2Z0 102 aa14.97□□□□□ -0.01
VSX1-203ENST00000409285 CRXO43186 299 aaPredicted RBP14.97□□□□□ -0.01
VSX1-203ENST00000409285 FAM74A3Q4VXF1 159 aa14.97□□□□□ -0.01
VSX1-203ENST00000409285 TMEM218A2RU14 115 aa14.96□□□□□ -0.01
VSX1-203ENST00000409285 CA1P00915 261 aaPredicted RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms