RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 VSIG2Q96IQ7 327 aa11.31□□□□□ -0.6
AFF3-202ENST00000409236 MRPS18CQ9Y3D5 142 aaKnown RBP11.31□□□□□ -0.6
AFF3-202ENST00000409236 HERV-K104P63124 156 aa11.31□□□□□ -0.6
AFF3-202ENST00000409236 Q8TAT8 98 aa11.31□□□□□ -0.6
AFF3-202ENST00000409236 CDCP2Q5VXM1 449 aa11.31□□□□□ -0.6
AFF3-202ENST00000409236 SIGLEC8Q9NYZ4 499 aa11.31□□□□□ -0.6
AFF3-202ENST00000409236 THSD7AQ9UPZ6 1657 aa11.3□□□□□ -0.6
AFF3-202ENST00000409236 PRSS29PA6NIE9 313 aa11.3□□□□□ -0.6
AFF3-202ENST00000409236 H0YGX0 51 aa11.3□□□□□ -0.6
AFF3-202ENST00000409236 CELA2AP08217 269 aa11.3□□□□□ -0.6
AFF3-202ENST00000409236 PRB4P10163 310 aaPredicted RBP11.3□□□□□ -0.6
AFF3-202ENST00000409236 CCL3L1P16619 93 aa11.3□□□□□ -0.6
AFF3-202ENST00000409236 DSCAMO60469 2012 aa11.3□□□□□ -0.6
AFF3-202ENST00000409236 ZFP2Q6ZN57 461 aa11.3□□□□□ -0.6
AFF3-202ENST00000409236 NTN3O00634 580 aaPredicted RBP11.3□□□□□ -0.6
AFF3-202ENST00000409236 CRYGCP07315 174 aa11.3□□□□□ -0.6
AFF3-202ENST00000409236 ATG2AQ2TAZ0 1938 aa11.3□□□□□ -0.6
AFF3-202ENST00000409236 LTBRP36941 435 aa11.3□□□□□ -0.6
AFF3-202ENST00000409236 M0R1W7 72 aa11.3□□□□□ -0.6
AFF3-202ENST00000409236 PRR19A6NJB7 356 aa11.29□□□□□ -0.6
AFF3-202ENST00000409236 H0YIZ8 118 aa11.29□□□□□ -0.6
AFF3-202ENST00000409236 C12orf74Q32Q52 190 aa11.29□□□□□ -0.6
AFF3-202ENST00000409236 ATP6V0E2Q8NHE4 81 aa11.29□□□□□ -0.6
AFF3-202ENST00000409236 COL5A3P25940 1745 aaPredicted RBP11.29□□□□□ -0.6
AFF3-202ENST00000409236 MDS2Q8NDY4 140 aa11.29□□□□□ -0.6
AFF3-202ENST00000409236 PDE6GP18545 87 aa11.29□□□□□ -0.6
AFF3-202ENST00000409236 IL15RAQ13261 267 aa11.29□□□□□ -0.6
AFF3-202ENST00000409236 LILRA6Q6PI73 481 aa11.29□□□□□ -0.6
AFF3-202ENST00000409236 LINC00527Q9UJ94 153 aa11.29□□□□□ -0.6
AFF3-202ENST00000409236 IGHV2-70DA0A0C4DH43 119 aa11.29□□□□□ -0.6
AFF3-202ENST00000409236 PSG7Q13046 419 aa11.28□□□□□ -0.6
AFF3-202ENST00000409236 C20orf78Q9BR46 151 aa11.28□□□□□ -0.6
AFF3-202ENST00000409236 NUP210LQ5VU65 1888 aa11.28□□□□□ -0.6
AFF3-202ENST00000409236 NSUN5P1Q3KNT7 163 aa11.28□□□□□ -0.6
AFF3-202ENST00000409236 RNF114Q9Y508 228 aa11.28□□□□□ -0.6
AFF3-202ENST00000409236 RHOHQ15669 191 aa11.28□□□□□ -0.6
AFF3-202ENST00000409236 PTPN13Q12923 2485 aa11.28□□□□□ -0.6
AFF3-202ENST00000409236 CHCHD2Q9Y6H1 151 aaPredicted RBP11.28□□□□□ -0.6
AFF3-202ENST00000409236 RPL35AP18077 110 aaKnown RBP11.28□□□□□ -0.6
AFF3-202ENST00000409236 Q6ZWC4 215 aa11.28□□□□□ -0.6
AFF3-202ENST00000409236 C9JQL5 133 aa11.27□□□□□ -0.6
AFF3-202ENST00000409236 PLXNA4Q9HCM2 1894 aa11.27□□□□□ -0.6
AFF3-202ENST00000409236 NREPQ16612 68 aa11.27□□□□□ -0.6
AFF3-202ENST00000409236 SHANK2-AS3Q9BTD1 123 aa11.27□□□□□ -0.6
AFF3-202ENST00000409236 METRNQ9UJH8 293 aa11.27□□□□□ -0.6
AFF3-202ENST00000409236 CGB3P0DN86 165 aa11.27□□□□□ -0.61
AFF3-202ENST00000409236 IGLV3-21P80748 117 aaPredicted RBP11.27□□□□□ -0.61
AFF3-202ENST00000409236 IGHV3-53P01767 116 aa11.27□□□□□ -0.61
AFF3-202ENST00000409236 VWC2Q2TAL6 325 aa11.27□□□□□ -0.61
AFF3-202ENST00000409236 SLC25A29Q8N8R3 303 aa11.27□□□□□ -0.61
AFF3-202ENST00000409236 DEFB125Q8N687 156 aa11.27□□□□□ -0.61
AFF3-202ENST00000409236 WFDC12Q8WWY7 111 aa11.27□□□□□ -0.61
AFF3-202ENST00000409236 NDUFC2-KCTD14E9PQ53 114 aa11.27□□□□□ -0.61
AFF3-202ENST00000409236 CFC1BP0CG36 223 aa11.27□□□□□ -0.61
AFF3-202ENST00000409236 CFC1P0CG37 223 aa11.27□□□□□ -0.61
AFF3-202ENST00000409236 ANXA2RQ3ZCQ2 193 aa11.27□□□□□ -0.61
AFF3-202ENST00000409236 SDHAF1A6NFY7 115 aa11.27□□□□□ -0.61
AFF3-202ENST00000409236 ICOSQ9Y6W8 199 aa11.27□□□□□ -0.61
AFF3-202ENST00000409236 ARMS2P0C7Q2 107 aa11.26□□□□□ -0.61
AFF3-202ENST00000409236 FOXI2Q6ZQN5 318 aa11.26□□□□□ -0.61
AFF3-202ENST00000409236 CGB7P0DN87 165 aa11.26□□□□□ -0.61
AFF3-202ENST00000409236 PYGO2Q9BRQ0 406 aa11.26□□□□□ -0.61
AFF3-202ENST00000409236 TRAV12-2A0A075B6T6 113 aa11.26□□□□□ -0.61
AFF3-202ENST00000409236 NTN5Q8WTR8 489 aaPredicted RBP11.26□□□□□ -0.61
AFF3-202ENST00000409236 JMJD7-PLA2G4BH0Y9G9 81 aa11.26□□□□□ -0.61
AFF3-202ENST00000409236 CYTL1Q9NRR1 136 aa11.26□□□□□ -0.61
AFF3-202ENST00000409236 LINC01560Q8TB33 94 aa11.25□□□□□ -0.61
AFF3-202ENST00000409236 SLC22A18ASQ8N1D0 253 aa11.25□□□□□ -0.61
AFF3-202ENST00000409236 C5orf64Q2M2E5 130 aa11.25□□□□□ -0.61
AFF3-202ENST00000409236 DAD1P61803 113 aa11.25□□□□□ -0.61
AFF3-202ENST00000409236 MRPL51Q4U2R6 128 aaKnown RBP11.25□□□□□ -0.61
AFF3-202ENST00000409236 PTPRBP23467 1997 aa11.24□□□□□ -0.61
AFF3-202ENST00000409236 NRTNQ99748 197 aa11.24□□□□□ -0.61
AFF3-202ENST00000409236 KIAA1671Q9BY89 1806 aa11.24□□□□□ -0.61
AFF3-202ENST00000409236 CR1LQ2VPA4 569 aa11.24□□□□□ -0.61
AFF3-202ENST00000409236 APOC4P55056 127 aa11.24□□□□□ -0.61
AFF3-202ENST00000409236 DEFB130BP0DP73 79 aa11.24□□□□□ -0.61
AFF3-202ENST00000409236 DEFB130AP0DP74 79 aa11.24□□□□□ -0.61
AFF3-202ENST00000409236 CRYGBP07316 175 aa11.24□□□□□ -0.61
AFF3-202ENST00000409236 OPRPNQ99935 248 aaPredicted RBP11.24□□□□□ -0.61
AFF3-202ENST00000409236 IGHV1-3A0A0C4DH29 117 aa11.24□□□□□ -0.61
AFF3-202ENST00000409236 H0YJW9 148 aa11.24□□□□□ -0.61
AFF3-202ENST00000409236 FAM231DQ6ZW35 169 aa11.24□□□□□ -0.61
AFF3-202ENST00000409236 MRPL23Q16540 153 aaKnown RBP11.23□□□□□ -0.61
AFF3-202ENST00000409236 VMO1Q7Z5L0 202 aa11.23□□□□□ -0.61
AFF3-202ENST00000409236 MSRB2Q9Y3D2 182 aa11.23□□□□□ -0.61
AFF3-202ENST00000409236 TRAV3A0A0B4J244 114 aa11.23□□□□□ -0.61
AFF3-202ENST00000409236 IGLL1P15814 213 aa11.23□□□□□ -0.61
AFF3-202ENST00000409236 ZNF134P52741 427 aa11.23□□□□□ -0.61
AFF3-202ENST00000409236 HIGD2BQ4VC39 106 aa11.23□□□□□ -0.61
AFF3-202ENST00000409236 RNASE6Q93091 150 aaKnown RBP11.23□□□□□ -0.61
AFF3-202ENST00000409236 WBP1Q96G27 269 aa11.23□□□□□ -0.61
AFF3-202ENST00000409236 MRPL35Q9NZE8 188 aaKnown RBP11.23□□□□□ -0.61
AFF3-202ENST00000409236 NOTCH4Q99466 2003 aa11.23□□□□□ -0.61
AFF3-202ENST00000409236 CELA3BP08861 270 aa11.23□□□□□ -0.61
AFF3-202ENST00000409236 F5H768 121 aa11.23□□□□□ -0.61
AFF3-202ENST00000409236 SONP18583 2426 aaKnown RBP11.23□□□□□ -0.61
AFF3-202ENST00000409236 KIR2DL5BA0A0G2JN68 375 aa11.23□□□□□ -0.61
AFF3-202ENST00000409236 KIR2DL5BA0A0G2JPC4 375 aa11.23□□□□□ -0.61
AFF3-202ENST00000409236 IGHV1-8P0DP01 117 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms