RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 RNASE7Q9H1E1 156 aaKnown RBP2.79□□□□□ -1.96
RTN4-208ENST00000404909 KLF12Q9Y4X4 402 aa2.79□□□□□ -1.96
RTN4-208ENST00000404909 AGRNO00468 2067 aa2.79□□□□□ -1.96
RTN4-208ENST00000404909 J3KRW8 73 aa2.79□□□□□ -1.96
RTN4-208ENST00000404909 SOCS3O14543 225 aa2.79□□□□□ -1.96
RTN4-208ENST00000404909 IGLV2-11P01706 119 aa2.79□□□□□ -1.96
RTN4-208ENST00000404909 CD33P20138 364 aa2.79□□□□□ -1.96
RTN4-208ENST00000404909 SNRPD3P62318 126 aaKnown RBP2.79□□□□□ -1.96
RTN4-208ENST00000404909 HIST1H1AQ02539 215 aaPredicted RBP2.79□□□□□ -1.96
RTN4-208ENST00000404909 SFRP2Q96HF1 295 aa2.79□□□□□ -1.96
RTN4-208ENST00000404909 B4DEV8 164 aa2.79□□□□□ -1.96
RTN4-208ENST00000404909 H7BYZ3 331 aa2.79□□□□□ -1.96
RTN4-208ENST00000404909 LTAP01374 205 aa2.79□□□□□ -1.96
RTN4-208ENST00000404909 IGLV2-8P01709 118 aa2.79□□□□□ -1.96
RTN4-208ENST00000404909 S100A9P06702 114 aaKnown RBP2.79□□□□□ -1.96
RTN4-208ENST00000404909 DEFB114Q30KQ6 69 aa2.79□□□□□ -1.96
RTN4-208ENST00000404909 TMEM78Q5T7P6 136 aa2.79□□□□□ -1.96
RTN4-208ENST00000404909 TMEM75Q8N9X5 138 aa2.79□□□□□ -1.96
RTN4-208ENST00000404909 C8orf49Q96NF6 230 aa2.79□□□□□ -1.96
RTN4-208ENST00000404909 SMCO4Q9NRQ5 59 aa2.79□□□□□ -1.96
RTN4-208ENST00000404909 PRELID1Q9Y255 219 aa2.79□□□□□ -1.96
RTN4-208ENST00000404909 IZUMO1RA6ND01 250 aa2.78□□□□□ -1.96
RTN4-208ENST00000404909 IGKV3-20P01619 116 aa2.78□□□□□ -1.96
RTN4-208ENST00000404909 IBA57Q5T440 356 aaKnown RBP2.78□□□□□ -1.96
RTN4-208ENST00000404909 C3orf56Q8N813 242 aa2.78□□□□□ -1.96
RTN4-208ENST00000404909 OR10G8Q8NGN5 311 aa2.78□□□□□ -1.96
RTN4-208ENST00000404909 OR10J6PQ8NGY7 276 aa2.78□□□□□ -1.96
RTN4-208ENST00000404909 CITED1Q99966 193 aa2.78□□□□□ -1.96
RTN4-208ENST00000404909 GPR61Q9BZJ8 451 aa2.78□□□□□ -1.96
RTN4-208ENST00000404909 AGPAT4-IT1Q9H0P7 198 aa2.78□□□□□ -1.96
RTN4-208ENST00000404909 PKD1L1Q8TDX9 2849 aa2.78□□□□□ -1.96
RTN4-208ENST00000404909 SERTM2A0A1B0GWG4 89 aa2.78□□□□□ -1.96
RTN4-208ENST00000404909 ZNF705GA8MUZ8 300 aaPredicted RBP2.78□□□□□ -1.96
RTN4-208ENST00000404909 K7EQG2 157 aa2.78□□□□□ -1.96
RTN4-208ENST00000404909 CA1P00915 261 aaPredicted RBP2.78□□□□□ -1.96
RTN4-208ENST00000404909 S100A6P06703 90 aa2.78□□□□□ -1.96
RTN4-208ENST00000404909 CT45A10P0DMU9 189 aa2.78□□□□□ -1.96
RTN4-208ENST00000404909 TMEM183AQ8IXX5 376 aa2.78□□□□□ -1.96
RTN4-208ENST00000404909 C15orf54Q8N8G6 183 aa2.78□□□□□ -1.96
RTN4-208ENST00000404909 DAZAP1Q96EP5 407 aaKnown RBP2.78□□□□□ -1.96
RTN4-208ENST00000404909 NDFIP1Q9BT67 221 aa2.78□□□□□ -1.96
RTN4-208ENST00000404909 CLEC5AQ9NY25 188 aa2.78□□□□□ -1.96
RTN4-208ENST00000404909 ZFP30Q9Y2G7 519 aa2.78□□□□□ -1.96
RTN4-208ENST00000404909 LY96Q9Y6Y9 160 aa2.78□□□□□ -1.96
RTN4-208ENST00000404909 NOTCH1P46531 2555 aa2.78□□□□□ -1.96
RTN4-208ENST00000404909 A0A087WWC5 75 aa2.78□□□□□ -1.96
RTN4-208ENST00000404909 GCGP01275 180 aa2.78□□□□□ -1.96
RTN4-208ENST00000404909 DEFB131AP59861 70 aa2.78□□□□□ -1.96
RTN4-208ENST00000404909 GDF5OSQ5U4N7 250 aa2.78□□□□□ -1.96
RTN4-208ENST00000404909 SAMD13Q5VXD3 122 aa2.78□□□□□ -1.96
RTN4-208ENST00000404909 LINC00322Q6ZN03 302 aaPredicted RBP2.78□□□□□ -1.96
RTN4-208ENST00000404909 OR4B1Q8NGF8 309 aa2.78□□□□□ -1.96
RTN4-208ENST00000404909 OR8A1Q8NGG7 326 aa2.78□□□□□ -1.96
RTN4-208ENST00000404909 ANAPC16Q96DE5 110 aa2.78□□□□□ -1.96
RTN4-208ENST00000404909 ZC2HC1AQ96GY0 325 aa2.78□□□□□ -1.96
RTN4-208ENST00000404909 PRR25Q96S07 402 aa2.78□□□□□ -1.96
RTN4-208ENST00000404909 MGAM2Q2M2H8 2515 aa2.78□□□□□ -1.96
RTN4-208ENST00000404909 P01737 135 aa2.78□□□□□ -1.97
RTN4-208ENST00000404909 ZNF138P52744 262 aa2.78□□□□□ -1.97
RTN4-208ENST00000404909 TCL1AP56279 114 aa2.78□□□□□ -1.97
RTN4-208ENST00000404909 FAM3BP58499 235 aaPredicted RBP2.78□□□□□ -1.97
RTN4-208ENST00000404909 ZNF124Q15973 351 aa2.78□□□□□ -1.97
RTN4-208ENST00000404909 SAPCD1Q5SSQ6 148 aa2.78□□□□□ -1.97
RTN4-208ENST00000404909 NUDT10Q8NFP7 164 aa2.78□□□□□ -1.97
RTN4-208ENST00000404909 SPATA3Q8NHX4 192 aa2.78□□□□□ -1.97
RTN4-208ENST00000404909 MRPL53Q96EL3 112 aaKnown RBP2.78□□□□□ -1.97
RTN4-208ENST00000404909 NUDT11Q96G61 164 aa2.78□□□□□ -1.97
RTN4-208ENST00000404909 MLST8Q9BVC4 326 aa2.78□□□□□ -1.97
RTN4-208ENST00000404909 CTDSP1Q9GZU7 261 aa2.78□□□□□ -1.97
RTN4-208ENST00000404909 TMSB15BA0A087X1C1 80 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 A0A1W2PPQ1 181 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 RBAKDNA6NC62 111 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 OR4C46A6NHA9 309 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 PPP1R2P9O14990 202 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 S100PP25815 95 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 S100A12P80511 92 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 ACTL10Q5JWF8 245 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 EBLN2Q6P2I7 272 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 C12orf54Q6X4T0 127 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 APRG1Q8IVJ8 170 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 LINC00482Q8N8I6 264 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 TMA7Q9Y2S6 64 aaKnown RBP2.77□□□□□ -1.97
RTN4-208ENST00000404909 TGIF2-C20orf24A0A0A6YYL0 155 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 KNCNA6PVL3 124 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 GATCO43716 136 aaKnown RBP2.77□□□□□ -1.97
RTN4-208ENST00000404909 SPINK4O60575 86 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 CRIP1P50238 77 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 RPL19P84098 196 aaKnown RBP2.77□□□□□ -1.97
RTN4-208ENST00000404909 C9orf47Q6ZRZ4 202 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 SMIM12Q96EX1 92 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 SPAG8Q99932 426 aaPredicted RBP2.77□□□□□ -1.97
RTN4-208ENST00000404909 BIN3Q9NQY0 253 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 OSTCQ9NRP0 149 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 ZNF492Q9P255 531 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 V9GYV3 84 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 CXorf65A6NEN9 183 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 FBLL1A6NHQ2 334 aaKnown RBP2.77□□□□□ -1.97
RTN4-208ENST00000404909 GPX1P07203 203 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 GZMBP10144 247 aa2.77□□□□□ -1.97
RTN4-208ENST00000404909 RNASE4P34096 147 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms