RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 OR10G9Q8NGN4 311 aa12.88□□□□□ -0.35
PTPRN2-204ENST00000404321 OR10G7Q8NGN6 311 aa12.88□□□□□ -0.35
PTPRN2-204ENST00000404321 C20orf144Q9BQM9 153 aa12.88□□□□□ -0.35
PTPRN2-204ENST00000404321 Q9H3A6 140 aa12.88□□□□□ -0.35
PTPRN2-204ENST00000404321 NOP10Q9NPE3 64 aaKnown RBP12.88□□□□□ -0.35
PTPRN2-204ENST00000404321 RNASE4P34096 147 aaKnown RBP12.87□□□□□ -0.35
PTPRN2-204ENST00000404321 CD300CQ08708 224 aa12.87□□□□□ -0.35
PTPRN2-204ENST00000404321 TMEM78Q5T7P6 136 aa12.87□□□□□ -0.35
PTPRN2-204ENST00000404321 INO80EQ8NBZ0 244 aaPredicted RBP12.87□□□□□ -0.35
PTPRN2-204ENST00000404321 Q8TAT8 98 aa12.87□□□□□ -0.35
PTPRN2-204ENST00000404321 RNASE8Q8TDE3 154 aaKnown RBP12.87□□□□□ -0.35
PTPRN2-204ENST00000404321 ASB13Q8WXK3 278 aa12.87□□□□□ -0.35
PTPRN2-204ENST00000404321 HYLS1Q96M11 299 aa12.87□□□□□ -0.35
PTPRN2-204ENST00000404321 LINC00477Q96M19 166 aa12.87□□□□□ -0.35
PTPRN2-204ENST00000404321 SH3BGRL3Q9H299 93 aa12.87□□□□□ -0.35
PTPRN2-204ENST00000404321 C7orf71A4D174 169 aa12.86□□□□□ -0.35
PTPRN2-204ENST00000404321 RNF222A6NCQ9 220 aa12.86□□□□□ -0.35
PTPRN2-204ENST00000404321 ATP6V0CP27449 155 aa12.86□□□□□ -0.35
PTPRN2-204ENST00000404321 C9orf47Q6ZRZ4 202 aa12.86□□□□□ -0.35
PTPRN2-204ENST00000404321 CCDC28AQ8IWP9 274 aa12.86□□□□□ -0.35
PTPRN2-204ENST00000404321 TMEM263Q8WUH6 116 aaKnown RBP12.86□□□□□ -0.35
PTPRN2-204ENST00000404321 FAM19A4Q96LR4 140 aa12.86□□□□□ -0.35
PTPRN2-204ENST00000404321 TIMM8BQ9Y5J9 83 aaPredicted RBP12.86□□□□□ -0.35
PTPRN2-204ENST00000404321 VPS13DQ5THJ4 4388 aa12.86□□□□□ -0.35
PTPRN2-204ENST00000404321 SLC25A5P05141 298 aaKnown RBP12.85□□□□□ -0.35
PTPRN2-204ENST00000404321 CSN1S1P47710 185 aa12.85□□□□□ -0.35
PTPRN2-204ENST00000404321 PRR9Q5T870 116 aa12.85□□□□□ -0.35
PTPRN2-204ENST00000404321 RPL7L1Q6DKI1 246 aaKnown RBP12.85□□□□□ -0.35
PTPRN2-204ENST00000404321 ZNF493Q6ZR52 646 aa12.85□□□□□ -0.35
PTPRN2-204ENST00000404321 RPH3ALQ9UNE2 315 aa12.85□□□□□ -0.35
PTPRN2-204ENST00000404321 TNFSF18Q9UNG2 199 aa12.85□□□□□ -0.35
PTPRN2-204ENST00000404321 KLLNB2CW77 178 aa12.84□□□□□ -0.35
PTPRN2-204ENST00000404321 G3V3Q6 166 aa12.84□□□□□ -0.35
PTPRN2-204ENST00000404321 SMLR1H3BR10 107 aa12.84□□□□□ -0.35
PTPRN2-204ENST00000404321 GPX1P07203 203 aa12.84□□□□□ -0.35
PTPRN2-204ENST00000404321 TMEM88Q6PEY1 159 aa12.84□□□□□ -0.35
PTPRN2-204ENST00000404321 Q6ZQT7 251 aa12.84□□□□□ -0.35
PTPRN2-204ENST00000404321 CRISP2P16562 243 aa12.83□□□□□ -0.36
PTPRN2-204ENST00000404321 CDC34P49427 236 aaPredicted RBP12.83□□□□□ -0.36
PTPRN2-204ENST00000404321 PQLC2Q6ZP29 291 aa12.83□□□□□ -0.36
PTPRN2-204ENST00000404321 LYPD1Q8N2G4 141 aa12.83□□□□□ -0.36
PTPRN2-204ENST00000404321 ZFAND2AQ8N6M9 145 aa12.83□□□□□ -0.36
PTPRN2-204ENST00000404321 OR2G3Q8NGZ4 309 aa12.83□□□□□ -0.36
PTPRN2-204ENST00000404321 ZNF492Q9P255 531 aa12.83□□□□□ -0.36
PTPRN2-204ENST00000404321 PGPA6NDG6 321 aa12.82□□□□□ -0.36
PTPRN2-204ENST00000404321 F5H768 121 aa12.82□□□□□ -0.36
PTPRN2-204ENST00000404321 ZNF324O75467 553 aaPredicted RBP12.82□□□□□ -0.36
PTPRN2-204ENST00000404321 ARL14EPLP0DKL9 152 aa12.82□□□□□ -0.36
PTPRN2-204ENST00000404321 ZNF138P52744 262 aa12.82□□□□□ -0.36
PTPRN2-204ENST00000404321 PYGO2Q9BRQ0 406 aa12.82□□□□□ -0.36
PTPRN2-204ENST00000404321 PSMG3Q9BT73 122 aaPredicted RBP12.82□□□□□ -0.36
PTPRN2-204ENST00000404321 OTORQ9NRC9 128 aa12.82□□□□□ -0.36
PTPRN2-204ENST00000404321 KMT2AQ03164 3969 aa12.82□□□□□ -0.36
PTPRN2-204ENST00000404321 BORCS7-ASMTA0A0B4J1R7 106 aa12.81□□□□□ -0.36
PTPRN2-204ENST00000404321 CBY3A6NI87 242 aa12.81□□□□□ -0.36
PTPRN2-204ENST00000404321 SNURFLB1AK76 121 aa12.81□□□□□ -0.36
PTPRN2-204ENST00000404321 DIRC3C9JPN6 131 aa12.81□□□□□ -0.36
PTPRN2-204ENST00000404321 ARPC5O15511 151 aa12.81□□□□□ -0.36
PTPRN2-204ENST00000404321 CMTM2Q8TAZ6 248 aa12.81□□□□□ -0.36
PTPRN2-204ENST00000404321 RAB24Q969Q5 203 aa12.81□□□□□ -0.36
PTPRN2-204ENST00000404321 FAM210BQ96KR6 192 aa12.81□□□□□ -0.36
PTPRN2-204ENST00000404321 BIRC6Q9NR09 4857 aa12.81□□□□□ -0.36
PTPRN2-204ENST00000404321 GAGE12BA1L429 117 aa12.81□□□□□ -0.36
PTPRN2-204ENST00000404321 GAGE7O76087 117 aa12.81□□□□□ -0.36
PTPRN2-204ENST00000404321 ATP5G1P05496 136 aa12.81□□□□□ -0.36
PTPRN2-204ENST00000404321 GAGE12FP0CL80 117 aa12.81□□□□□ -0.36
PTPRN2-204ENST00000404321 GAGE12GP0CL81 117 aa12.81□□□□□ -0.36
PTPRN2-204ENST00000404321 GAGE12IP0CL82 117 aa12.81□□□□□ -0.36
PTPRN2-204ENST00000404321 P0DMU3 169 aa12.81□□□□□ -0.36
PTPRN2-204ENST00000404321 FAM231AP0DMU4 169 aa12.81□□□□□ -0.36
PTPRN2-204ENST00000404321 FAM231CP0DMU5 169 aa12.81□□□□□ -0.36
PTPRN2-204ENST00000404321 ATP5G3P48201 142 aa12.81□□□□□ -0.36
PTPRN2-204ENST00000404321 RXFP4Q8TDU9 374 aa12.81□□□□□ -0.36
PTPRN2-204ENST00000404321 GSN-AS1Q9NRJ2 163 aa12.81□□□□□ -0.36
PTPRN2-204ENST00000404321 GNG5P63218 68 aa12.8□□□□□ -0.36
PTPRN2-204ENST00000404321 TP53TG3Q9ULZ0 132 aa12.8□□□□□ -0.36
PTPRN2-204ENST00000404321 RBAKDNA6NC62 111 aa12.79□□□□□ -0.36
PTPRN2-204ENST00000404321 RGS13O14921 159 aa12.79□□□□□ -0.36
PTPRN2-204ENST00000404321 MBP02144 154 aa12.79□□□□□ -0.36
PTPRN2-204ENST00000404321 STAG3L2P0CL84 134 aa12.79□□□□□ -0.36
PTPRN2-204ENST00000404321 STAG3L3P0CL85 134 aa12.79□□□□□ -0.36
PTPRN2-204ENST00000404321 GCHFRP30047 84 aa12.79□□□□□ -0.36
PTPRN2-204ENST00000404321 SERF2P84101 59 aa12.79□□□□□ -0.36
PTPRN2-204ENST00000404321 FAM74A1Q5RGS3 127 aa12.79□□□□□ -0.36
PTPRN2-204ENST00000404321 GOLT1AQ6ZVE7 132 aa12.79□□□□□ -0.36
PTPRN2-204ENST00000404321 SSX7Q7RTT5 188 aa12.79□□□□□ -0.36
PTPRN2-204ENST00000404321 UBE2DNLQ8IWF7 75 aa12.79□□□□□ -0.36
PTPRN2-204ENST00000404321 GNPNAT1Q96EK6 184 aaPredicted RBP12.79□□□□□ -0.36
PTPRN2-204ENST00000404321 NMBP08949 121 aa12.78□□□□□ -0.36
PTPRN2-204ENST00000404321 Q6ZTI0 123 aa12.78□□□□□ -0.36
PTPRN2-204ENST00000404321 IQCF2Q8IXL9 164 aa12.78□□□□□ -0.36
PTPRN2-204ENST00000404321 EIF4E3Q8N5X7 224 aaKnown RBP12.78□□□□□ -0.36
PTPRN2-204ENST00000404321 POM121L12Q8N7R1 296 aa12.78□□□□□ -0.36
PTPRN2-204ENST00000404321 C11orf72Q8NBR9 251 aa12.78□□□□□ -0.36
PTPRN2-204ENST00000404321 ACTR3CQ9C0K3 210 aaPredicted RBP12.78□□□□□ -0.36
PTPRN2-204ENST00000404321 MUC21Q5SSG8 566 aa12.77□□□□□ -0.37
PTPRN2-204ENST00000404321 KLF12Q9Y4X4 402 aa12.77□□□□□ -0.37
PTPRN2-204ENST00000404321 IGHV1OR15-1A0A075B7D0 117 aa12.76□□□□□ -0.37
PTPRN2-204ENST00000404321 TRAV8-1A0A0A6YYK1 113 aa12.76□□□□□ -0.37
PTPRN2-204ENST00000404321 NUDT3O95989 172 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 257.9 ms