RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 RNASE4P34096 147 aaKnown RBP8.1□□□□□ -1.11
LINC00544-201ENST00000400540 TCL1AP56279 114 aa8.1□□□□□ -1.11
LINC00544-201ENST00000400540 GUK1Q16774 197 aa8.1□□□□□ -1.11
LINC00544-201ENST00000400540 ANXA2RQ3ZCQ2 193 aa8.1□□□□□ -1.11
LINC00544-201ENST00000400540 CDPF1Q6NVV7 123 aa8.1□□□□□ -1.11
LINC00544-201ENST00000400540 ST6GAL2Q96JF0 529 aa8.1□□□□□ -1.11
LINC00544-201ENST00000400540 AGPAT4-IT1Q9H0P7 198 aa8.1□□□□□ -1.11
LINC00544-201ENST00000400540 PTTG2Q9NZH5 202 aa8.1□□□□□ -1.11
LINC00544-201ENST00000400540 TRBV19A0A075B6N1 114 aa8.09□□□□□ -1.11
LINC00544-201ENST00000400540 CST7O76096 145 aa8.09□□□□□ -1.11
LINC00544-201ENST00000400540 PYYP10082 97 aa8.09□□□□□ -1.11
LINC00544-201ENST00000400540 LYPD5Q6UWN5 251 aa8.09□□□□□ -1.11
LINC00544-201ENST00000400540 Q6ZRG5 221 aa8.09□□□□□ -1.11
LINC00544-201ENST00000400540 EXOC3-AS1Q8N2X6 119 aa8.09□□□□□ -1.11
LINC00544-201ENST00000400540 OR1L4Q8NGR5 311 aa8.09□□□□□ -1.11
LINC00544-201ENST00000400540 FRZBQ92765 325 aa8.09□□□□□ -1.11
LINC00544-201ENST00000400540 MRPL53Q96EL3 112 aaKnown RBP8.09□□□□□ -1.11
LINC00544-201ENST00000400540 C8orf49Q96NF6 230 aa8.09□□□□□ -1.11
LINC00544-201ENST00000400540 LINC00467Q9BRT7 94 aa8.09□□□□□ -1.11
LINC00544-201ENST00000400540 MDFICQ9P1T7 246 aa8.09□□□□□ -1.11
LINC00544-201ENST00000400540 WDR83OSQ9Y284 106 aa8.09□□□□□ -1.11
LINC00544-201ENST00000400540 LSM5Q9Y4Y9 91 aaKnown RBP8.09□□□□□ -1.11
LINC00544-201ENST00000400540 IGKV2-40A0A087WW87 121 aaPredicted RBP8.08□□□□□ -1.12
LINC00544-201ENST00000400540 UBE2L5PA0A1B0GUS4 154 aa8.08□□□□□ -1.12
LINC00544-201ENST00000400540 NAP1L6A6NFF2 107 aa8.08□□□□□ -1.12
LINC00544-201ENST00000400540 FAM24AA6NFZ4 105 aa8.08□□□□□ -1.12
LINC00544-201ENST00000400540 L7N2F9 121 aa8.08□□□□□ -1.12
LINC00544-201ENST00000400540 PRAF2O60831 178 aa8.08□□□□□ -1.12
LINC00544-201ENST00000400540 ZNF253O75346 499 aa8.08□□□□□ -1.12
LINC00544-201ENST00000400540 MPDU1O75352 247 aa8.08□□□□□ -1.12
LINC00544-201ENST00000400540 IGKV2D-40P01614 121 aaPredicted RBP8.08□□□□□ -1.12
LINC00544-201ENST00000400540 INPP1P49441 399 aa8.08□□□□□ -1.12
LINC00544-201ENST00000400540 BCAP31P51572 246 aa8.08□□□□□ -1.12
LINC00544-201ENST00000400540 CRYBA4P53673 196 aa8.08□□□□□ -1.12
LINC00544-201ENST00000400540 VAMP2P63027 116 aa8.08□□□□□ -1.12
LINC00544-201ENST00000400540 FHL2Q14192 279 aa8.08□□□□□ -1.12
LINC00544-201ENST00000400540 TRIQKQ629K1 86 aa8.08□□□□□ -1.12
LINC00544-201ENST00000400540 WFDC10BQ8IUB3 73 aa8.08□□□□□ -1.12
LINC00544-201ENST00000400540 BLNKQ8WV28 456 aa8.08□□□□□ -1.12
LINC00544-201ENST00000400540 MITD1Q8WV92 249 aa8.08□□□□□ -1.12
LINC00544-201ENST00000400540 PFDN5Q99471 154 aa8.08□□□□□ -1.12
LINC00544-201ENST00000400540 C11orf1Q9H5F2 150 aa8.08□□□□□ -1.12
LINC00544-201ENST00000400540 PRO0255Q9UI72 69 aa8.08□□□□□ -1.12
LINC00544-201ENST00000400540 RGS13O14921 159 aa8.07□□□□□ -1.12
LINC00544-201ENST00000400540 IFNA5P01569 189 aa8.07□□□□□ -1.12
LINC00544-201ENST00000400540 GPX1P07203 203 aa8.07□□□□□ -1.12
LINC00544-201ENST00000400540 CRISP2P16562 243 aa8.07□□□□□ -1.12
LINC00544-201ENST00000400540 CAV2P51636 162 aa8.07□□□□□ -1.12
LINC00544-201ENST00000400540 ICAM4Q14773 271 aa8.07□□□□□ -1.12
LINC00544-201ENST00000400540 SPANXN2Q5MJ10 180 aa8.07□□□□□ -1.12
LINC00544-201ENST00000400540 IBA57Q5T440 356 aaKnown RBP8.07□□□□□ -1.12
LINC00544-201ENST00000400540 ZFAND2AQ8N6M9 145 aa8.07□□□□□ -1.12
LINC00544-201ENST00000400540 LINC00477Q96M19 166 aa8.07□□□□□ -1.12
LINC00544-201ENST00000400540 SDHCQ99643 169 aaPredicted RBP8.07□□□□□ -1.12
LINC00544-201ENST00000400540 VGLL1Q99990 258 aa8.07□□□□□ -1.12
LINC00544-201ENST00000400540 SLC39A9Q9NUM3 307 aa8.07□□□□□ -1.12
LINC00544-201ENST00000400540 UQCC1Q9NVA1 299 aa8.07□□□□□ -1.12
LINC00544-201ENST00000400540 HHLA3Q9XRX5 114 aa8.07□□□□□ -1.12
LINC00544-201ENST00000400540 LY96Q9Y6Y9 160 aa8.07□□□□□ -1.12
LINC00544-201ENST00000400540 IGHV1OR15-1A0A075B7D0 117 aa8.06□□□□□ -1.12
LINC00544-201ENST00000400540 CCDC160A6NGH7 325 aa8.06□□□□□ -1.12
LINC00544-201ENST00000400540 FAM25EA8MYX2 175 aa8.06□□□□□ -1.12
LINC00544-201ENST00000400540 E5RGE8 158 aa8.06□□□□□ -1.12
LINC00544-201ENST00000400540 SFTA3P0C7M3 94 aa8.06□□□□□ -1.12
LINC00544-201ENST00000400540 BAXQ07812 192 aa8.06□□□□□ -1.12
LINC00544-201ENST00000400540 RAB31Q13636 194 aa8.06□□□□□ -1.12
LINC00544-201ENST00000400540 VWC2Q2TAL6 325 aa8.06□□□□□ -1.12
LINC00544-201ENST00000400540 GCSAMLQ5JQS6 135 aa8.06□□□□□ -1.12
LINC00544-201ENST00000400540 FAM122CQ6P4D5 195 aa8.06□□□□□ -1.12
LINC00544-201ENST00000400540 C9orf47Q6ZRZ4 202 aa8.06□□□□□ -1.12
LINC00544-201ENST00000400540 NFE4Q86UQ8 179 aa8.06□□□□□ -1.12
LINC00544-201ENST00000400540 Q8TAT8 98 aa8.06□□□□□ -1.12
LINC00544-201ENST00000400540 MSRB1Q9NZV6 116 aa8.06□□□□□ -1.12
LINC00544-201ENST00000400540 TMEM14CQ9P0S9 112 aa8.06□□□□□ -1.12
LINC00544-201ENST00000400540 TIMM9Q9Y5J7 89 aa8.06□□□□□ -1.12
LINC00544-201ENST00000400540 IGSF23A1L1A6 192 aa8.05□□□□□ -1.12
LINC00544-201ENST00000400540 K7EQD1 137 aa8.05□□□□□ -1.12
LINC00544-201ENST00000400540 HIST1H1EP10412 219 aaKnown RBP8.05□□□□□ -1.12
LINC00544-201ENST00000400540 RPL29P47914 159 aaKnown RBP8.05□□□□□ -1.12
LINC00544-201ENST00000400540 MRPL23Q16540 153 aaKnown RBP8.05□□□□□ -1.12
LINC00544-201ENST00000400540 NEGR1Q7Z3B1 354 aa8.05□□□□□ -1.12
LINC00544-201ENST00000400540 ARPC5LQ9BPX5 153 aa8.05□□□□□ -1.12
LINC00544-201ENST00000400540 SLC25A2Q9BXI2 301 aa8.05□□□□□ -1.12
LINC00544-201ENST00000400540 C20orf85Q9H1P6 137 aa8.05□□□□□ -1.12
LINC00544-201ENST00000400540 PRELID1Q9Y255 219 aa8.05□□□□□ -1.12
LINC00544-201ENST00000400540 TRGV4A0A0C4DH28 118 aa8.04□□□□□ -1.12
LINC00544-201ENST00000400540 FGF7P21781 194 aa8.04□□□□□ -1.12
LINC00544-201ENST00000400540 GCSHP23434 173 aa8.04□□□□□ -1.12
LINC00544-201ENST00000400540 ZNF415Q09FC8 603 aa8.04□□□□□ -1.12
LINC00544-201ENST00000400540 PDE6HQ13956 83 aa8.04□□□□□ -1.12
LINC00544-201ENST00000400540 ZNF846Q147U1 533 aa8.04□□□□□ -1.12
LINC00544-201ENST00000400540 MUC21Q5SSG8 566 aa8.04□□□□□ -1.12
LINC00544-201ENST00000400540 TMEM78Q5T7P6 136 aa8.04□□□□□ -1.12
LINC00544-201ENST00000400540 C12orf45Q8N5I9 185 aaPredicted RBP8.04□□□□□ -1.12
LINC00544-201ENST00000400540 ZNF479Q96JC4 524 aa8.04□□□□□ -1.12
LINC00544-201ENST00000400540 SEC22CQ9BRL7 303 aa8.04□□□□□ -1.12
LINC00544-201ENST00000400540 RBM38Q9H0Z9 239 aaKnown RBP8.04□□□□□ -1.12
LINC00544-201ENST00000400540 ZNF492Q9P255 531 aa8.04□□□□□ -1.12
LINC00544-201ENST00000400540 TRAV9-2A0A087WT02 112 aa8.03□□□□□ -1.12
LINC00544-201ENST00000400540 CENPXA8MT69 81 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms