RNA–Protein interactions for RNA: ENST00000399603.5

CACNA1C-209, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-209ENST00000399603 C9orf47Q6ZRZ4 202 aa10.09□□□□□ -0.79
CACNA1C-209ENST00000399603 PRSS47A8MTI9 375 aa10.09□□□□□ -0.79
CACNA1C-209ENST00000399603 IGLL1P15814 213 aa10.09□□□□□ -0.79
CACNA1C-209ENST00000399603 IGHV1-3A0A0C4DH29 117 aa10.09□□□□□ -0.79
CACNA1C-209ENST00000399603 Q86TA4 180 aa10.09□□□□□ -0.79
CACNA1C-209ENST00000399603 TRAV4A0A0B4J268 109 aa10.09□□□□□ -0.79
CACNA1C-209ENST00000399603 A0A0B4J2C4 111 aa10.09□□□□□ -0.79
CACNA1C-209ENST00000399603 IGKV1D-8A0A087WSZ0 117 aa10.09□□□□□ -0.79
CACNA1C-209ENST00000399603 PSPNO60542 156 aa10.09□□□□□ -0.79
CACNA1C-209ENST00000399603 NTF4P34130 210 aa10.09□□□□□ -0.79
CACNA1C-209ENST00000399603 C9orf106Q8NAJ2 232 aa10.09□□□□□ -0.79
CACNA1C-209ENST00000399603 C18orf32Q8TCD1 76 aa10.09□□□□□ -0.79
CACNA1C-209ENST00000399603 SPTA1P02549 2419 aa10.09□□□□□ -0.79
CACNA1C-209ENST00000399603 IGLL5B9A064 214 aa10.08□□□□□ -0.8
CACNA1C-209ENST00000399603 ETV2O00321 342 aaPredicted RBP10.08□□□□□ -0.8
CACNA1C-209ENST00000399603 CFC1BP0CG36 223 aa10.08□□□□□ -0.8
CACNA1C-209ENST00000399603 CFC1P0CG37 223 aa10.08□□□□□ -0.8
CACNA1C-209ENST00000399603 DYNAPQ8N1N2 210 aa10.08□□□□□ -0.8
CACNA1C-209ENST00000399603 MYO16Q9Y6X6 1858 aa10.08□□□□□ -0.8
CACNA1C-209ENST00000399603 K7EMI3 77 aa10.08□□□□□ -0.8
CACNA1C-209ENST00000399603 TIRAPP58753 221 aa10.08□□□□□ -0.8
CACNA1C-209ENST00000399603 FREM3P0C091 2139 aa10.08□□□□□ -0.8
CACNA1C-209ENST00000399603 WBP1Q96G27 269 aa10.08□□□□□ -0.8
CACNA1C-209ENST00000399603 LYPD3O95274 346 aa10.08□□□□□ -0.8
CACNA1C-209ENST00000399603 MRPL51Q4U2R6 128 aaKnown RBP10.08□□□□□ -0.8
CACNA1C-209ENST00000399603 ASPHD1Q5U4P2 390 aa10.08□□□□□ -0.8
CACNA1C-209ENST00000399603 TMEM200BQ69YZ2 307 aa10.08□□□□□ -0.8
CACNA1C-209ENST00000399603 LRRK1Q38SD2 2015 aa10.08□□□□□ -0.8
CACNA1C-209ENST00000399603 Q9H8V8 135 aa10.07□□□□□ -0.8
CACNA1C-209ENST00000399603 NPYP01303 97 aa10.07□□□□□ -0.8
CACNA1C-209ENST00000399603 FGFBP3Q8TAT2 258 aa10.07□□□□□ -0.8
CACNA1C-209ENST00000399603 HERVK_113P63121 156 aa10.07□□□□□ -0.8
CACNA1C-209ENST00000399603 WFDC11Q8NEX6 87 aa10.07□□□□□ -0.8
CACNA1C-209ENST00000399603 C20orf144Q9BQM9 153 aa10.07□□□□□ -0.8
CACNA1C-209ENST00000399603 FBLN5Q9UBX5 448 aa10.07□□□□□ -0.8
CACNA1C-209ENST00000399603 PLCE1Q9P212 2302 aa10.07□□□□□ -0.8
CACNA1C-209ENST00000399603 CFHR1Q03591 330 aa10.07□□□□□ -0.8
CACNA1C-209ENST00000399603 ZNF883P0CG24 379 aa10.07□□□□□ -0.8
CACNA1C-209ENST00000399603 LINC00205P59089 165 aa10.07□□□□□ -0.8
CACNA1C-209ENST00000399603 FAM110DQ8TAY7 271 aaPredicted RBP10.07□□□□□ -0.8
CACNA1C-209ENST00000399603 TP53BP1Q12888 1972 aaPredicted RBP10.07□□□□□ -0.8
CACNA1C-209ENST00000399603 SEM1Q6ZVN7 128 aa10.07□□□□□ -0.8
CACNA1C-209ENST00000399603 BTCP35070 178 aa10.06□□□□□ -0.8
CACNA1C-209ENST00000399603 A0A087WV48 116 aa10.06□□□□□ -0.8
CACNA1C-209ENST00000399603 CRYGBP07316 175 aa10.06□□□□□ -0.8
CACNA1C-209ENST00000399603 LINC00271P0C7V0 271 aa10.06□□□□□ -0.8
CACNA1C-209ENST00000399603 C5orf38Q86SI9 138 aa10.06□□□□□ -0.8
CACNA1C-209ENST00000399603 YLPM1P49750 1951 aaKnown RBP10.06□□□□□ -0.8
CACNA1C-209ENST00000399603 DOCK6Q96HP0 2047 aa10.06□□□□□ -0.8
CACNA1C-209ENST00000399603 UBE2AP49459 152 aa10.06□□□□□ -0.8
CACNA1C-209ENST00000399603 DKK2Q9UBU2 259 aa10.06□□□□□ -0.8
CACNA1C-209ENST00000399603 DAZ1Q9NQZ3 744 aaKnown RBP10.06□□□□□ -0.8
CACNA1C-209ENST00000399603 FAM110AQ9BQ89 295 aa10.05□□□□□ -0.8
CACNA1C-209ENST00000399603 CACNA1EQ15878 2313 aa10.05□□□□□ -0.8
CACNA1C-209ENST00000399603 DYSFO75923 2080 aa10.05□□□□□ -0.8
CACNA1C-209ENST00000399603 C5orf24Q7Z6I8 188 aa10.05□□□□□ -0.8
CACNA1C-209ENST00000399603 RNASE6Q93091 150 aaKnown RBP10.05□□□□□ -0.8
CACNA1C-209ENST00000399603 LYZL4Q96KX0 146 aa10.05□□□□□ -0.8
CACNA1C-209ENST00000399603 MTCL1Q9Y4B5 1905 aaKnown RBP10.05□□□□□ -0.8
CACNA1C-209ENST00000399603 FAM166AQ6J272 317 aa10.05□□□□□ -0.8
CACNA1C-209ENST00000399603 HS3ST6Q96QI5 342 aa10.05□□□□□ -0.8
CACNA1C-209ENST00000399603 IGLV10-54A0A075B6I4 117 aa10.05□□□□□ -0.8
CACNA1C-209ENST00000399603 TRBV12-3P01733 135 aa10.05□□□□□ -0.8
CACNA1C-209ENST00000399603 FOCADQ5VW36 1801 aa10.05□□□□□ -0.8
CACNA1C-209ENST00000399603 DLEC1Q9Y238 1755 aa10.05□□□□□ -0.8
CACNA1C-209ENST00000399603 FAM240AA0A1B0GVK7 77 aa10.05□□□□□ -0.8
CACNA1C-209ENST00000399603 CR1LQ2VPA4 569 aa10.05□□□□□ -0.8
CACNA1C-209ENST00000399603 Q6ZWC4 215 aa10.05□□□□□ -0.8
CACNA1C-209ENST00000399603 IGLC7A0M8Q6 106 aa10.04□□□□□ -0.8
CACNA1C-209ENST00000399603 IGHV1-8P0DP01 117 aa10.04□□□□□ -0.8
CACNA1C-209ENST00000399603 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.04□□□□□ -0.8
CACNA1C-209ENST00000399603 IGKV2-29A2NJV5 120 aaPredicted RBP10.04□□□□□ -0.8
CACNA1C-209ENST00000399603 RNF114Q9Y508 228 aa10.04□□□□□ -0.8
CACNA1C-209ENST00000399603 IGHV4-30-2A0A087WSY4 118 aa10.04□□□□□ -0.8
CACNA1C-209ENST00000399603 HIGD2BQ4VC39 106 aa10.04□□□□□ -0.8
CACNA1C-209ENST00000399603 A0A0J9YWU9 116 aa10.04□□□□□ -0.8
CACNA1C-209ENST00000399603 NCR3O14931 201 aa10.04□□□□□ -0.8
CACNA1C-209ENST00000399603 IGHV1-46P01743 117 aa10.04□□□□□ -0.8
CACNA1C-209ENST00000399603 HERV-K104P63124 156 aa10.04□□□□□ -0.8
CACNA1C-209ENST00000399603 C5orf64Q2M2E5 130 aa10.04□□□□□ -0.8
CACNA1C-209ENST00000399603 ZNF672Q499Z4 452 aaPredicted RBP10.04□□□□□ -0.8
CACNA1C-209ENST00000399603 USMG5Q96IX5 58 aa10.04□□□□□ -0.8
CACNA1C-209ENST00000399603 TRAV23DV6A0A075B6W5 121 aa10.03□□□□□ -0.8
CACNA1C-209ENST00000399603 CTSGP08311 255 aa10.03□□□□□ -0.8
CACNA1C-209ENST00000399603 Q0VG73 95 aa10.03□□□□□ -0.8
CACNA1C-209ENST00000399603 GFRA4Q9GZZ7 299 aa10.03□□□□□ -0.8
CACNA1C-209ENST00000399603 PRSS46E5RG02 174 aa10.03□□□□□ -0.8
CACNA1C-209ENST00000399603 FOXF2Q12947 444 aa10.03□□□□□ -0.8
CACNA1C-209ENST00000399603 CYTL1Q9NRR1 136 aa10.03□□□□□ -0.8
CACNA1C-209ENST00000399603 KIF13BQ9NQT8 1826 aa10.03□□□□□ -0.8
CACNA1C-209ENST00000399603 PINLYPA6NC86 204 aa10.03□□□□□ -0.8
CACNA1C-209ENST00000399603 F8VRH5 84 aa10.03□□□□□ -0.8
CACNA1C-209ENST00000399603 UBE2E1P51965 193 aa10.03□□□□□ -0.8
CACNA1C-209ENST00000399603 ZNF493Q6ZR52 646 aa10.03□□□□□ -0.8
CACNA1C-209ENST00000399603 LYPD1Q8N2G4 141 aa10.03□□□□□ -0.8
CACNA1C-209ENST00000399603 PFN1P07737 140 aaKnown RBP10.03□□□□□ -0.8
CACNA1C-209ENST00000399603 LY6DQ14210 128 aa10.03□□□□□ -0.8
CACNA1C-209ENST00000399603 LINC00114Q6XXX2 140 aa10.03□□□□□ -0.8
CACNA1C-209ENST00000399603 SIGLEC8Q9NYZ4 499 aa10.03□□□□□ -0.8
CACNA1C-209ENST00000399603 TRAV26-1A0A087WT03 109 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms