RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 SH3BGRL3Q9H299 93 aa13.47□□□□□ -0.25
COLCA2-201ENST00000398035 PGPA6NDG6 321 aa13.47□□□□□ -0.25
COLCA2-201ENST00000398035 LYRM9A8MSI8 78 aa13.47□□□□□ -0.25
COLCA2-201ENST00000398035 CXorf1O96002 111 aa13.47□□□□□ -0.25
COLCA2-201ENST00000398035 FAM222AQ5U5X8 452 aa13.47□□□□□ -0.25
COLCA2-201ENST00000398035 GFI1BQ5VTD9 330 aa13.47□□□□□ -0.25
COLCA2-201ENST00000398035 C16orf74Q96GX8 76 aa13.47□□□□□ -0.25
COLCA2-201ENST00000398035 FAM19A4Q96LR4 140 aa13.47□□□□□ -0.25
COLCA2-201ENST00000398035 TMEM167BQ9NRX6 74 aa13.47□□□□□ -0.25
COLCA2-201ENST00000398035 ZNF492Q9P255 531 aa13.47□□□□□ -0.25
COLCA2-201ENST00000398035 CELA1Q9UNI1 258 aa13.47□□□□□ -0.25
COLCA2-201ENST00000398035 SMLR1H3BR10 107 aa13.46□□□□□ -0.26
COLCA2-201ENST00000398035 GPX1P07203 203 aa13.46□□□□□ -0.26
COLCA2-201ENST00000398035 HTN1P15515 57 aa13.46□□□□□ -0.26
COLCA2-201ENST00000398035 CRISP2P16562 243 aa13.46□□□□□ -0.26
COLCA2-201ENST00000398035 ZNF138P52744 262 aa13.46□□□□□ -0.26
COLCA2-201ENST00000398035 AKR1C8PQ5T2L2 129 aa13.46□□□□□ -0.26
COLCA2-201ENST00000398035 PYGO2Q9BRQ0 406 aa13.46□□□□□ -0.26
COLCA2-201ENST00000398035 LENEPQ9Y5L5 61 aa13.46□□□□□ -0.26
COLCA2-201ENST00000398035 KMT2CQ8NEZ4 4911 aaKnown RBP13.45□□□□□ -0.26
COLCA2-201ENST00000398035 KLLNB2CW77 178 aa13.45□□□□□ -0.26
COLCA2-201ENST00000398035 HMGB3O15347 200 aaKnown RBP13.45□□□□□ -0.26
COLCA2-201ENST00000398035 ARL14EPLP0DKL9 152 aa13.45□□□□□ -0.26
COLCA2-201ENST00000398035 EIF5AP63241 154 aaKnown RBP13.45□□□□□ -0.26
COLCA2-201ENST00000398035 SUN5Q8TC36 379 aa13.45□□□□□ -0.26
COLCA2-201ENST00000398035 TMED6Q8WW62 240 aa13.45□□□□□ -0.26
COLCA2-201ENST00000398035 HYLS1Q96M11 299 aa13.45□□□□□ -0.26
COLCA2-201ENST00000398035 VGLL1Q99990 258 aa13.45□□□□□ -0.26
COLCA2-201ENST00000398035 CYTL1Q9NRR1 136 aa13.45□□□□□ -0.26
COLCA2-201ENST00000398035 CSMD3Q7Z407 3707 aa13.44□□□□□ -0.26
COLCA2-201ENST00000398035 IGKV2-40A0A087WW87 121 aaPredicted RBP13.44□□□□□ -0.26
COLCA2-201ENST00000398035 DEFB131BA0A096LNP1 70 aa13.44□□□□□ -0.26
COLCA2-201ENST00000398035 C7orf71A4D174 169 aa13.44□□□□□ -0.26
COLCA2-201ENST00000398035 DIRC3C9JPN6 131 aa13.44□□□□□ -0.26
COLCA2-201ENST00000398035 IGKV2D-40P01614 121 aaPredicted RBP13.44□□□□□ -0.26
COLCA2-201ENST00000398035 TMEM263Q8WUH6 116 aaKnown RBP13.44□□□□□ -0.26
COLCA2-201ENST00000398035 TIMM8BQ9Y5J9 83 aaPredicted RBP13.44□□□□□ -0.26
COLCA2-201ENST00000398035 TRAV12-3A0A0B4J271 114 aa13.43□□□□□ -0.26
COLCA2-201ENST00000398035 SERTM2A0A1B0GWG4 89 aa13.43□□□□□ -0.26
COLCA2-201ENST00000398035 KANTRA0A1W2PQU2 76 aa13.43□□□□□ -0.26
COLCA2-201ENST00000398035 IGLL5B9A064 214 aa13.43□□□□□ -0.26
COLCA2-201ENST00000398035 J3KRW8 73 aa13.43□□□□□ -0.26
COLCA2-201ENST00000398035 AZU1P20160 251 aa13.43□□□□□ -0.26
COLCA2-201ENST00000398035 GCHFRP30047 84 aa13.43□□□□□ -0.26
COLCA2-201ENST00000398035 DAD1P61803 113 aa13.43□□□□□ -0.26
COLCA2-201ENST00000398035 KIR3DS1Q14943 382 aa13.43□□□□□ -0.26
COLCA2-201ENST00000398035 Q6ZNX1 250 aa13.43□□□□□ -0.26
COLCA2-201ENST00000398035 OR11H4Q8NGC9 324 aa13.43□□□□□ -0.26
COLCA2-201ENST00000398035 ST6GAL2Q96JF0 529 aa13.43□□□□□ -0.26
COLCA2-201ENST00000398035 CTXND1A0A1B0GTU2 59 aa13.42□□□□□ -0.26
COLCA2-201ENST00000398035 EIF3GO75821 320 aaKnown RBP eCLIP13.42□□□□□ -0.26
COLCA2-201ENST00000398035 RNASE4P34096 147 aaKnown RBP13.42□□□□□ -0.26
COLCA2-201ENST00000398035 FAM210BQ96KR6 192 aa13.42□□□□□ -0.26
COLCA2-201ENST00000398035 LINC00467Q9BRT7 94 aa13.42□□□□□ -0.26
COLCA2-201ENST00000398035 SEC11BP0C7V7 166 aa13.41□□□□□ -0.26
COLCA2-201ENST00000398035 ZNF767PQ75MW2 155 aa13.41□□□□□ -0.26
COLCA2-201ENST00000398035 RNASE8Q8TDE3 154 aaKnown RBP13.41□□□□□ -0.26
COLCA2-201ENST00000398035 K7EQM0 130 aa13.4□□□□□ -0.26
COLCA2-201ENST00000398035 ZNF324O75467 553 aaPredicted RBP13.4□□□□□ -0.26
COLCA2-201ENST00000398035 PRM2P04554 102 aa13.4□□□□□ -0.26
COLCA2-201ENST00000398035 ZFAND2AQ8N6M9 145 aa13.4□□□□□ -0.26
COLCA2-201ENST00000398035 NKX6-2Q9C056 277 aaPredicted RBP13.4□□□□□ -0.26
COLCA2-201ENST00000398035 STARD9Q9P2P6 4700 aa13.4□□□□□ -0.26
COLCA2-201ENST00000398035 A0A1W2PRE2 83 aa13.39□□□□□ -0.27
COLCA2-201ENST00000398035 UMAD1C9J7I0 102 aa13.39□□□□□ -0.27
COLCA2-201ENST00000398035 BCL2L11O43521 198 aa13.39□□□□□ -0.27
COLCA2-201ENST00000398035 LGALS9CQ6DKI2 356 aa13.39□□□□□ -0.27
COLCA2-201ENST00000398035 TCTE3Q8IZS6 198 aa13.39□□□□□ -0.27
COLCA2-201ENST00000398035 C5orf17Q8NAS9 161 aa13.39□□□□□ -0.27
COLCA2-201ENST00000398035 STOML3Q8TAV4 291 aa13.39□□□□□ -0.27
COLCA2-201ENST00000398035 LINC00476Q8WZB0 136 aa13.39□□□□□ -0.27
COLCA2-201ENST00000398035 ZNF471Q9BX82 626 aaPredicted RBP13.39□□□□□ -0.27
COLCA2-201ENST00000398035 PLAC8L1A1L4L8 177 aa13.39□□□□□ -0.27
COLCA2-201ENST00000398035 SNURFLB1AK76 121 aa13.39□□□□□ -0.27
COLCA2-201ENST00000398035 PFDN1O60925 122 aa13.39□□□□□ -0.27
COLCA2-201ENST00000398035 LY6G6CO95867 125 aa13.39□□□□□ -0.27
COLCA2-201ENST00000398035 CD300CQ08708 224 aa13.39□□□□□ -0.27
COLCA2-201ENST00000398035 ANXA2RQ3ZCQ2 193 aa13.39□□□□□ -0.27
COLCA2-201ENST00000398035 EIF4E3Q8N5X7 224 aaKnown RBP13.39□□□□□ -0.27
COLCA2-201ENST00000398035 ZNF680Q8NEM1 530 aa13.39□□□□□ -0.27
COLCA2-201ENST00000398035 APLNQ9ULZ1 77 aa13.39□□□□□ -0.27
COLCA2-201ENST00000398035 TENM2Q9NT68 2774 aa13.38□□□□□ -0.27
COLCA2-201ENST00000398035 IGHV4-4A0A075B6R2 117 aa13.38□□□□□ -0.27
COLCA2-201ENST00000398035 FBLL1A6NHQ2 334 aaKnown RBP13.38□□□□□ -0.27
COLCA2-201ENST00000398035 CBY3A6NI87 242 aa13.38□□□□□ -0.27
COLCA2-201ENST00000398035 RGS13O14921 159 aa13.38□□□□□ -0.27
COLCA2-201ENST00000398035 DEFB130BP0DP73 79 aa13.38□□□□□ -0.27
COLCA2-201ENST00000398035 DEFB130AP0DP74 79 aa13.38□□□□□ -0.27
COLCA2-201ENST00000398035 SUMO1P63165 101 aaKnown RBP13.38□□□□□ -0.27
COLCA2-201ENST00000398035 GOLT1AQ6ZVE7 132 aa13.38□□□□□ -0.27
COLCA2-201ENST00000398035 IQCF2Q8IXL9 164 aa13.38□□□□□ -0.27
COLCA2-201ENST00000398035 NDUFAF3Q9BU61 184 aa13.38□□□□□ -0.27
COLCA2-201ENST00000398035 PLA2G2EQ9NZK7 142 aa13.38□□□□□ -0.27
COLCA2-201ENST00000398035 BTN1A1Q13410 526 aa13.37□□□□□ -0.27
COLCA2-201ENST00000398035 ZNF726P1Q15940 193 aa13.37□□□□□ -0.27
COLCA2-201ENST00000398035 TMUB2Q71RG4 321 aa13.37□□□□□ -0.27
COLCA2-201ENST00000398035 NOP10Q9NPE3 64 aaKnown RBP13.37□□□□□ -0.27
COLCA2-201ENST00000398035 EPDR1Q9UM22 224 aa13.37□□□□□ -0.27
COLCA2-201ENST00000398035 RPH3ALQ9UNE2 315 aa13.37□□□□□ -0.27
COLCA2-201ENST00000398035 TCRAP04437 139 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms