RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 K7EQM0 130 aa14.31□□□□□ -0.12
MAP1LC3A-203ENST00000397709 PDE6DO43924 150 aa14.31□□□□□ -0.12
MAP1LC3A-203ENST00000397709 NDUFS6O75380 124 aaKnown RBP14.31□□□□□ -0.12
MAP1LC3A-203ENST00000397709 IGKV3-20P01619 116 aa14.31□□□□□ -0.12
MAP1LC3A-203ENST00000397709 CT45A10P0DMU9 189 aa14.31□□□□□ -0.12
MAP1LC3A-203ENST00000397709 TMEM78Q5T7P6 136 aa14.31□□□□□ -0.12
MAP1LC3A-203ENST00000397709 TMEM75Q8N9X5 138 aa14.31□□□□□ -0.12
MAP1LC3A-203ENST00000397709 C2CD4CQ8TF44 421 aa14.31□□□□□ -0.12
MAP1LC3A-203ENST00000397709 ODF3Q96PU9 254 aa14.31□□□□□ -0.12
MAP1LC3A-203ENST00000397709 EIF5A2Q9GZV4 153 aaKnown RBP14.31□□□□□ -0.12
MAP1LC3A-203ENST00000397709 TRAV8-1A0A0A6YYK1 113 aa14.3□□□□□ -0.12
MAP1LC3A-203ENST00000397709 IGLV2-11P01706 119 aa14.3□□□□□ -0.12
MAP1LC3A-203ENST00000397709 FAM19A4Q96LR4 140 aa14.3□□□□□ -0.12
MAP1LC3A-203ENST00000397709 LINC00479Q96M42 142 aa14.3□□□□□ -0.12
MAP1LC3A-203ENST00000397709 PPP1R14DQ9NXH3 145 aa14.3□□□□□ -0.12
MAP1LC3A-203ENST00000397709 ZNF492Q9P255 531 aa14.3□□□□□ -0.12
MAP1LC3A-203ENST00000397709 FBLL1A6NHQ2 334 aaKnown RBP14.29□□□□□ -0.12
MAP1LC3A-203ENST00000397709 FRMD6-AS1P0C7T7 363 aa14.29□□□□□ -0.12
MAP1LC3A-203ENST00000397709 AKR1C3P42330 323 aa14.29□□□□□ -0.12
MAP1LC3A-203ENST00000397709 ZNF138P52744 262 aa14.29□□□□□ -0.12
MAP1LC3A-203ENST00000397709 MORN3Q6PF18 240 aaPredicted RBP14.29□□□□□ -0.12
MAP1LC3A-203ENST00000397709 Q8TAT8 98 aa14.29□□□□□ -0.12
MAP1LC3A-203ENST00000397709 MED9Q9NWA0 146 aa14.29□□□□□ -0.12
MAP1LC3A-203ENST00000397709 KLF12Q9Y4X4 402 aa14.29□□□□□ -0.12
MAP1LC3A-203ENST00000397709 TRAV34A0A0B4J273 112 aa14.28□□□□□ -0.12
MAP1LC3A-203ENST00000397709 FLI1Q01543 452 aaPredicted RBP14.28□□□□□ -0.12
MAP1LC3A-203ENST00000397709 SGK494Q96LW2 274 aa14.28□□□□□ -0.12
MAP1LC3A-203ENST00000397709 SLC35B3Q9H1N7 401 aa14.28□□□□□ -0.12
MAP1LC3A-203ENST00000397709 PSG8Q9UQ74 426 aa14.28□□□□□ -0.12
MAP1LC3A-203ENST00000397709 KIR2DL5BA0A0G2JN68 375 aa14.27□□□□□ -0.13
MAP1LC3A-203ENST00000397709 KIR2DL5BA0A0G2JPC4 375 aa14.27□□□□□ -0.13
MAP1LC3A-203ENST00000397709 TRBV7-9A0A0J9YWB2 115 aa14.27□□□□□ -0.13
MAP1LC3A-203ENST00000397709 TRBV6-1A0A0K0K1D8 114 aa14.27□□□□□ -0.13
MAP1LC3A-203ENST00000397709 RAB19A4D1S5 217 aa14.27□□□□□ -0.13
MAP1LC3A-203ENST00000397709 TMEM250H0YL14 139 aa14.27□□□□□ -0.13
MAP1LC3A-203ENST00000397709 SRSF3P84103 164 aaKnown RBP14.27□□□□□ -0.13
MAP1LC3A-203ENST00000397709 DEFA6Q01524 100 aa14.27□□□□□ -0.13
MAP1LC3A-203ENST00000397709 TMEM183BQ1AE95 376 aa14.27□□□□□ -0.13
MAP1LC3A-203ENST00000397709 KIR2DL5AQ8N109 375 aa14.27□□□□□ -0.13
MAP1LC3A-203ENST00000397709 KIR2DL5BQ8NHK3 375 aa14.27□□□□□ -0.13
MAP1LC3A-203ENST00000397709 MRAPQ8TCY5 172 aa14.27□□□□□ -0.13
MAP1LC3A-203ENST00000397709 FMC1Q96HJ9 113 aa14.27□□□□□ -0.13
MAP1LC3A-203ENST00000397709 SMDT1Q9H4I9 107 aa14.27□□□□□ -0.13
MAP1LC3A-203ENST00000397709 LENEPQ9Y5L5 61 aa14.27□□□□□ -0.13
MAP1LC3A-203ENST00000397709 S100A9P06702 114 aaKnown RBP14.26□□□□□ -0.13
MAP1LC3A-203ENST00000397709 SRP19P09132 144 aaKnown RBP14.26□□□□□ -0.13
MAP1LC3A-203ENST00000397709 GIG44P09565 113 aaPredicted RBP14.26□□□□□ -0.13
MAP1LC3A-203ENST00000397709 APOC4P55056 127 aa14.26□□□□□ -0.13
MAP1LC3A-203ENST00000397709 NUTF2P61970 127 aaKnown RBP14.26□□□□□ -0.13
MAP1LC3A-203ENST00000397709 PEA15Q15121 130 aa14.26□□□□□ -0.13
MAP1LC3A-203ENST00000397709 Q86TA4 180 aa14.26□□□□□ -0.13
MAP1LC3A-203ENST00000397709 ASCL2Q99929 193 aa14.26□□□□□ -0.13
MAP1LC3A-203ENST00000397709 CSTL1Q9H114 145 aa14.26□□□□□ -0.13
MAP1LC3A-203ENST00000397709 LINC00862A6NCI5 91 aa14.25□□□□□ -0.13
MAP1LC3A-203ENST00000397709 C9JQL5 133 aa14.25□□□□□ -0.13
MAP1LC3A-203ENST00000397709 CRISP2P16562 243 aa14.25□□□□□ -0.13
MAP1LC3A-203ENST00000397709 LEPP41159 167 aa14.25□□□□□ -0.13
MAP1LC3A-203ENST00000397709 RPL35P42766 123 aaKnown RBP14.25□□□□□ -0.13
MAP1LC3A-203ENST00000397709 FXYD7P58549 80 aa14.25□□□□□ -0.13
MAP1LC3A-203ENST00000397709 UBE2G1P62253 170 aa14.25□□□□□ -0.13
MAP1LC3A-203ENST00000397709 SPINK13Q1W4C9 94 aa14.25□□□□□ -0.13
MAP1LC3A-203ENST00000397709 DEFB121Q5J5C9 76 aa14.25□□□□□ -0.13
MAP1LC3A-203ENST00000397709 PRNTQ86SH4 94 aa14.25□□□□□ -0.13
MAP1LC3A-203ENST00000397709 TVP23CQ96ET8 276 aa14.25□□□□□ -0.13
MAP1LC3A-203ENST00000397709 DERL1Q9BUN8 251 aa14.25□□□□□ -0.13
MAP1LC3A-203ENST00000397709 MEGF8Q7Z7M0 2845 aa14.25□□□□□ -0.13
MAP1LC3A-203ENST00000397709 M0R2Z0 102 aa14.24□□□□□ -0.13
MAP1LC3A-203ENST00000397709 TSPOP30536 169 aa14.24□□□□□ -0.13
MAP1LC3A-203ENST00000397709 CDKN1BP46527 198 aa14.24□□□□□ -0.13
MAP1LC3A-203ENST00000397709 ZFAND2AQ8N6M9 145 aa14.24□□□□□ -0.13
MAP1LC3A-203ENST00000397709 KLLNB2CW77 178 aa14.23□□□□□ -0.13
MAP1LC3A-203ENST00000397709 CRXO43186 299 aaPredicted RBP14.23□□□□□ -0.13
MAP1LC3A-203ENST00000397709 CA1P00915 261 aaPredicted RBP14.23□□□□□ -0.13
MAP1LC3A-203ENST00000397709 LTAP01374 205 aa14.23□□□□□ -0.13
MAP1LC3A-203ENST00000397709 AMBPP02760 352 aa14.23□□□□□ -0.13
MAP1LC3A-203ENST00000397709 TAS2R60P59551 318 aa14.23□□□□□ -0.13
MAP1LC3A-203ENST00000397709 IGF2BP2-AS1Q96M15 143 aa14.23□□□□□ -0.13
MAP1LC3A-203ENST00000397709 UBE2CO00762 179 aa14.22□□□□□ -0.13
MAP1LC3A-203ENST00000397709 KIR3DS1Q14943 382 aa14.22□□□□□ -0.13
MAP1LC3A-203ENST00000397709 SAPCD1Q5SSQ6 148 aa14.22□□□□□ -0.13
MAP1LC3A-203ENST00000397709 PRR9Q5T870 116 aa14.22□□□□□ -0.13
MAP1LC3A-203ENST00000397709 COMMD7Q86VX2 200 aa14.22□□□□□ -0.13
MAP1LC3A-203ENST00000397709 NDFIP1Q9BT67 221 aa14.22□□□□□ -0.13
MAP1LC3A-203ENST00000397709 C1QTNF4Q9BXJ3 329 aa14.22□□□□□ -0.13
MAP1LC3A-203ENST00000397709 XCL2Q9UBD3 114 aa14.22□□□□□ -0.13
MAP1LC3A-203ENST00000397709 TRAV12-2A0A075B6T6 113 aa14.21□□□□□ -0.13
MAP1LC3A-203ENST00000397709 C8orf49Q96NF6 230 aa14.21□□□□□ -0.13
MAP1LC3A-203ENST00000397709 PARLQ9H300 379 aa14.21□□□□□ -0.13
MAP1LC3A-203ENST00000397709 TREM1Q9NP99 234 aa14.21□□□□□ -0.13
MAP1LC3A-203ENST00000397709 ZFP30Q9Y2G7 519 aa14.21□□□□□ -0.13
MAP1LC3A-203ENST00000397709 GFI1BQ5VTD9 330 aa14.2□□□□□ -0.14
MAP1LC3A-203ENST00000397709 COX8CQ7Z4L0 72 aa14.2□□□□□ -0.14
MAP1LC3A-203ENST00000397709 CSNK1G2-AS1Q8NCQ2 148 aa14.2□□□□□ -0.14
MAP1LC3A-203ENST00000397709 PRKDCP78527 4128 aaKnown RBP14.2□□□□□ -0.14
MAP1LC3A-203ENST00000397709 J3KRW8 73 aa14.19□□□□□ -0.14
MAP1LC3A-203ENST00000397709 INSP01308 110 aa14.19□□□□□ -0.14
MAP1LC3A-203ENST00000397709 GPX1P07203 203 aa14.19□□□□□ -0.14
MAP1LC3A-203ENST00000397709 CEBPGP53567 150 aa14.19□□□□□ -0.14
MAP1LC3A-203ENST00000397709 BTN1A1Q13410 526 aa14.19□□□□□ -0.14
MAP1LC3A-203ENST00000397709 CENPWQ5EE01 88 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms