RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 RPL29P47914 159 aaKnown RBP8.12□□□□□ -1.11
SYNE4-203ENST00000397428 CNPY1Q3B7I2 92 aa8.12□□□□□ -1.11
SYNE4-203ENST00000397428 SPANXN2Q5MJ10 180 aa8.12□□□□□ -1.11
SYNE4-203ENST00000397428 MIC13Q5XKP0 118 aa8.12□□□□□ -1.11
SYNE4-203ENST00000397428 C9orf47Q6ZRZ4 202 aa8.12□□□□□ -1.11
SYNE4-203ENST00000397428 C12orf45Q8N5I9 185 aaPredicted RBP8.12□□□□□ -1.11
SYNE4-203ENST00000397428 ST6GAL2Q96JF0 529 aa8.12□□□□□ -1.11
SYNE4-203ENST00000397428 PFDN5Q99471 154 aa8.12□□□□□ -1.11
SYNE4-203ENST00000397428 PRO0255Q9UI72 69 aa8.12□□□□□ -1.11
SYNE4-203ENST00000397428 HHLA3Q9XRX5 114 aa8.12□□□□□ -1.11
SYNE4-203ENST00000397428 ICOSQ9Y6W8 199 aa8.12□□□□□ -1.11
SYNE4-203ENST00000397428 SRRM2Q9UQ35 2752 aaKnown RBP8.12□□□□□ -1.11
SYNE4-203ENST00000397428 A0A087WTM6 91 aa8.11□□□□□ -1.11
SYNE4-203ENST00000397428 HIST1H1EP10412 219 aaKnown RBP8.11□□□□□ -1.11
SYNE4-203ENST00000397428 CRYBA4P53673 196 aa8.11□□□□□ -1.11
SYNE4-203ENST00000397428 KRTAP10-1P60331 282 aa8.11□□□□□ -1.11
SYNE4-203ENST00000397428 ERVFC1-1P60608 527 aa8.11□□□□□ -1.11
SYNE4-203ENST00000397428 SLAQ13239 276 aa8.11□□□□□ -1.11
SYNE4-203ENST00000397428 BTN1A1Q13410 526 aa8.11□□□□□ -1.11
SYNE4-203ENST00000397428 FHL2Q14192 279 aa8.11□□□□□ -1.11
SYNE4-203ENST00000397428 IBA57Q5T440 356 aaKnown RBP8.11□□□□□ -1.11
SYNE4-203ENST00000397428 NFE4Q86UQ8 179 aa8.11□□□□□ -1.11
SYNE4-203ENST00000397428 IQCF2Q8IXL9 164 aa8.11□□□□□ -1.11
SYNE4-203ENST00000397428 SDHCQ99643 169 aaPredicted RBP8.11□□□□□ -1.11
SYNE4-203ENST00000397428 C20orf85Q9H1P6 137 aa8.11□□□□□ -1.11
SYNE4-203ENST00000397428 SLC39A9Q9NUM3 307 aa8.11□□□□□ -1.11
SYNE4-203ENST00000397428 PTTG2Q9NZH5 202 aa8.11□□□□□ -1.11
SYNE4-203ENST00000397428 TRAV9-2A0A087WT02 112 aa8.1□□□□□ -1.11
SYNE4-203ENST00000397428 K7EP13 123 aa8.1□□□□□ -1.11
SYNE4-203ENST00000397428 L7N2F9 121 aa8.1□□□□□ -1.11
SYNE4-203ENST00000397428 PRAF2O60831 178 aa8.1□□□□□ -1.11
SYNE4-203ENST00000397428 CST7O76096 145 aa8.1□□□□□ -1.11
SYNE4-203ENST00000397428 GPX1P07203 203 aa8.1□□□□□ -1.11
SYNE4-203ENST00000397428 VAMP2P63027 116 aa8.1□□□□□ -1.11
SYNE4-203ENST00000397428 MRPL23Q16540 153 aaKnown RBP8.1□□□□□ -1.11
SYNE4-203ENST00000397428 ZFAND2AQ8N6M9 145 aa8.1□□□□□ -1.11
SYNE4-203ENST00000397428 UQCC1Q9NVA1 299 aa8.1□□□□□ -1.11
SYNE4-203ENST00000397428 TP53TG3Q9ULZ0 132 aa8.1□□□□□ -1.11
SYNE4-203ENST00000397428 TIMM9Q9Y5J7 89 aa8.1□□□□□ -1.11
SYNE4-203ENST00000397428 FAM24AA6NFZ4 105 aa8.09□□□□□ -1.11
SYNE4-203ENST00000397428 CENPXA8MT69 81 aa8.09□□□□□ -1.11
SYNE4-203ENST00000397428 S100A11P31949 105 aa8.09□□□□□ -1.11
SYNE4-203ENST00000397428 INPP1P49441 399 aa8.09□□□□□ -1.11
SYNE4-203ENST00000397428 BCAP31P51572 246 aa8.09□□□□□ -1.11
SYNE4-203ENST00000397428 IL15RAQ13261 267 aa8.09□□□□□ -1.11
SYNE4-203ENST00000397428 PDE6HQ13956 83 aa8.09□□□□□ -1.11
SYNE4-203ENST00000397428 Q6ZQT7 251 aa8.09□□□□□ -1.11
SYNE4-203ENST00000397428 NEGR1Q7Z3B1 354 aa8.09□□□□□ -1.11
SYNE4-203ENST00000397428 EXOC3-AS1Q8N2X6 119 aa8.09□□□□□ -1.11
SYNE4-203ENST00000397428 VGLL1Q99990 258 aa8.09□□□□□ -1.11
SYNE4-203ENST00000397428 MRPL32Q9BYC8 188 aaKnown RBP8.09□□□□□ -1.11
SYNE4-203ENST00000397428 CCSO14618 274 aa8.08□□□□□ -1.12
SYNE4-203ENST00000397428 IFNA5P01569 189 aa8.08□□□□□ -1.12
SYNE4-203ENST00000397428 IGHV3-53P01767 116 aa8.08□□□□□ -1.12
SYNE4-203ENST00000397428 ZNF846Q147U1 533 aa8.08□□□□□ -1.12
SYNE4-203ENST00000397428 Q5VSD8 79 aa8.08□□□□□ -1.12
SYNE4-203ENST00000397428 TRIQKQ629K1 86 aa8.08□□□□□ -1.12
SYNE4-203ENST00000397428 FRZBQ92765 325 aa8.08□□□□□ -1.12
SYNE4-203ENST00000397428 C2orf50Q96LR7 162 aa8.08□□□□□ -1.12
SYNE4-203ENST00000397428 C8orf49Q96NF6 230 aa8.08□□□□□ -1.12
SYNE4-203ENST00000397428 ZNF492Q9P255 531 aa8.08□□□□□ -1.12
SYNE4-203ENST00000397428 LSM5Q9Y4Y9 91 aaKnown RBP8.08□□□□□ -1.12
SYNE4-203ENST00000397428 IGHV1OR15-1A0A075B7D0 117 aa8.07□□□□□ -1.12
SYNE4-203ENST00000397428 TRBV7-9A0A0J9YWB2 115 aa8.07□□□□□ -1.12
SYNE4-203ENST00000397428 RGS13O14921 159 aa8.07□□□□□ -1.12
SYNE4-203ENST00000397428 PLA2G10O15496 165 aa8.07□□□□□ -1.12
SYNE4-203ENST00000397428 DNAH10OSP0CZ25 163 aa8.07□□□□□ -1.12
SYNE4-203ENST00000397428 PYYP10082 97 aa8.07□□□□□ -1.12
SYNE4-203ENST00000397428 SULT1A1P50225 295 aa8.07□□□□□ -1.12
SYNE4-203ENST00000397428 CAV2P51636 162 aa8.07□□□□□ -1.12
SYNE4-203ENST00000397428 ICAM4Q14773 271 aa8.07□□□□□ -1.12
SYNE4-203ENST00000397428 ATP6V1FQ16864 119 aa8.07□□□□□ -1.12
SYNE4-203ENST00000397428 PRR9Q5T870 116 aa8.07□□□□□ -1.12
SYNE4-203ENST00000397428 TMEM252Q8N6L7 170 aa8.07□□□□□ -1.12
SYNE4-203ENST00000397428 RBM38Q9H0Z9 239 aaKnown RBP8.07□□□□□ -1.12
SYNE4-203ENST00000397428 MRPL16Q9NX20 251 aaKnown RBP8.07□□□□□ -1.12
SYNE4-203ENST00000397428 MSRB1Q9NZV6 116 aa8.07□□□□□ -1.12
SYNE4-203ENST00000397428 LY96Q9Y6Y9 160 aa8.07□□□□□ -1.12
SYNE4-203ENST00000397428 IGSF23A1L1A6 192 aa8.06□□□□□ -1.12
SYNE4-203ENST00000397428 NBEAP1P0C6P0 100 aa8.06□□□□□ -1.12
SYNE4-203ENST00000397428 GCSHP23434 173 aa8.06□□□□□ -1.12
SYNE4-203ENST00000397428 TMEM78Q5T7P6 136 aa8.06□□□□□ -1.12
SYNE4-203ENST00000397428 BLNKQ8WV28 456 aa8.06□□□□□ -1.12
SYNE4-203ENST00000397428 RASL10AQ92737 203 aa8.06□□□□□ -1.12
SYNE4-203ENST00000397428 FAM167A-AS1Q96KT0 104 aa8.06□□□□□ -1.12
SYNE4-203ENST00000397428 AAMDCQ9H7C9 122 aa8.06□□□□□ -1.12
SYNE4-203ENST00000397428 LYRM2Q9NU23 88 aaPredicted RBP8.06□□□□□ -1.12
SYNE4-203ENST00000397428 IGKV2-40A0A087WW87 121 aaPredicted RBP8.05□□□□□ -1.12
SYNE4-203ENST00000397428 C5orf51A6NDU8 294 aa8.05□□□□□ -1.12
SYNE4-203ENST00000397428 CCDC160A6NGH7 325 aa8.05□□□□□ -1.12
SYNE4-203ENST00000397428 K7EQD1 137 aa8.05□□□□□ -1.12
SYNE4-203ENST00000397428 IGKV2D-40P01614 121 aaPredicted RBP8.05□□□□□ -1.12
SYNE4-203ENST00000397428 SMR3BP02814 79 aaPredicted RBP8.05□□□□□ -1.12
SYNE4-203ENST00000397428 IL7P13232 177 aa8.05□□□□□ -1.12
SYNE4-203ENST00000397428 PVALBP20472 110 aaPredicted RBP8.05□□□□□ -1.12
SYNE4-203ENST00000397428 ZNF138P52744 262 aa8.05□□□□□ -1.12
SYNE4-203ENST00000397428 BAXQ07812 192 aa8.05□□□□□ -1.12
SYNE4-203ENST00000397428 FAM122CQ6P4D5 195 aa8.05□□□□□ -1.12
SYNE4-203ENST00000397428 OR10G4Q8NGN3 311 aa8.05□□□□□ -1.12
SYNE4-203ENST00000397428 SLC25A2Q9BXI2 301 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms