RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 F8W036 122 aa17.51■□□□□ 0.39
TSPAN4-202ENST00000397396 CD7P09564 240 aa17.51■□□□□ 0.39
TSPAN4-202ENST00000397396 ZNF138P52744 262 aa17.51■□□□□ 0.39
TSPAN4-202ENST00000397396 SAPCD1Q5SSQ6 148 aa17.51■□□□□ 0.39
TSPAN4-202ENST00000397396 Q86TA4 180 aa17.51■□□□□ 0.39
TSPAN4-202ENST00000397396 NIPSNAP3BQ9BS92 247 aa17.51■□□□□ 0.39
TSPAN4-202ENST00000397396 TRAV34A0A0B4J273 112 aa17.5■□□□□ 0.39
TSPAN4-202ENST00000397396 TRBV7-9A0A0J9YWB2 115 aa17.5■□□□□ 0.39
TSPAN4-202ENST00000397396 LINC00479Q96M42 142 aa17.5■□□□□ 0.39
TSPAN4-202ENST00000397396 ODF3Q96PU9 254 aa17.5■□□□□ 0.39
TSPAN4-202ENST00000397396 VGLL1Q99990 258 aa17.5■□□□□ 0.39
TSPAN4-202ENST00000397396 LY96Q9Y6Y9 160 aa17.5■□□□□ 0.39
TSPAN4-202ENST00000397396 TRAV8-1A0A0A6YYK1 113 aa17.49■□□□□ 0.39
TSPAN4-202ENST00000397396 F6UB75 175 aa17.49■□□□□ 0.39
TSPAN4-202ENST00000397396 LTAP01374 205 aa17.49■□□□□ 0.39
TSPAN4-202ENST00000397396 IGLV2-11P01706 119 aa17.49■□□□□ 0.39
TSPAN4-202ENST00000397396 CENPWQ5EE01 88 aa17.49■□□□□ 0.39
TSPAN4-202ENST00000397396 SAMD5Q5TGI4 173 aa17.49■□□□□ 0.39
TSPAN4-202ENST00000397396 PRNTQ86SH4 94 aa17.49■□□□□ 0.39
TSPAN4-202ENST00000397396 BAGE2Q86Y30 109 aa17.49■□□□□ 0.39
TSPAN4-202ENST00000397396 CLUHP3Q96NS8 147 aa17.49■□□□□ 0.39
TSPAN4-202ENST00000397396 AGPAT4-IT1Q9H0P7 198 aa17.49■□□□□ 0.39
TSPAN4-202ENST00000397396 ZNF492Q9P255 531 aa17.49■□□□□ 0.39
TSPAN4-202ENST00000397396 NOTCH3Q9UM47 2321 aa17.49■□□□□ 0.39
TSPAN4-202ENST00000397396 ACTL10Q5JWF8 245 aa17.48■□□□□ 0.39
TSPAN4-202ENST00000397396 STHQ8IWL8 128 aa17.48■□□□□ 0.39
TSPAN4-202ENST00000397396 IGF2BP2-AS1Q96M15 143 aa17.48■□□□□ 0.39
TSPAN4-202ENST00000397396 BIN3Q9NQY0 253 aa17.48■□□□□ 0.39
TSPAN4-202ENST00000397396 C19orf73Q9NVV2 129 aa17.48■□□□□ 0.39
TSPAN4-202ENST00000397396 NAT8Q9UHE5 227 aa17.48■□□□□ 0.39
TSPAN4-202ENST00000397396 ERCC8Q13216 396 aa17.47■□□□□ 0.39
TSPAN4-202ENST00000397396 TMEM241Q24JQ0 296 aa17.47■□□□□ 0.39
TSPAN4-202ENST00000397396 APRG1Q8IVJ8 170 aa17.47■□□□□ 0.39
TSPAN4-202ENST00000397396 KNCNA6PVL3 124 aa17.47■□□□□ 0.39
TSPAN4-202ENST00000397396 A8MTW9 85 aa17.47■□□□□ 0.39
TSPAN4-202ENST00000397396 H3BMM0 161 aa17.47■□□□□ 0.39
TSPAN4-202ENST00000397396 PNRC1Q12796 327 aaPredicted RBP17.47■□□□□ 0.39
TSPAN4-202ENST00000397396 GDF5OSQ5U4N7 250 aa17.47■□□□□ 0.39
TSPAN4-202ENST00000397396 OR4B1Q8NGF8 309 aa17.47■□□□□ 0.39
TSPAN4-202ENST00000397396 SGK494Q96LW2 274 aa17.47■□□□□ 0.39
TSPAN4-202ENST00000397396 TRRAPQ9Y4A5 3859 aa17.46■□□□□ 0.39
TSPAN4-202ENST00000397396 SORL1Q92673 2214 aa17.46■□□□□ 0.39
TSPAN4-202ENST00000397396 ZNF705DP0CH99 300 aaPredicted RBP17.46■□□□□ 0.38
TSPAN4-202ENST00000397396 ZNF705BP0CI00 300 aaPredicted RBP17.46■□□□□ 0.38
TSPAN4-202ENST00000397396 TSPOP30536 169 aa17.46■□□□□ 0.38
TSPAN4-202ENST00000397396 LEPP41159 167 aa17.46■□□□□ 0.38
TSPAN4-202ENST00000397396 DEFB1P60022 68 aa17.46■□□□□ 0.38
TSPAN4-202ENST00000397396 TMEM183AQ8IXX5 376 aa17.46■□□□□ 0.38
TSPAN4-202ENST00000397396 PRR25Q96S07 402 aa17.46■□□□□ 0.38
TSPAN4-202ENST00000397396 CARHSP1Q9Y2V2 147 aaKnown RBP17.46■□□□□ 0.38
TSPAN4-202ENST00000397396 VWFP04275 2813 aa17.45■□□□□ 0.38
TSPAN4-202ENST00000397396 ADCYAP1P18509 176 aa17.45■□□□□ 0.38
TSPAN4-202ENST00000397396 C10orf91Q5T1B1 145 aa17.45■□□□□ 0.38
TSPAN4-202ENST00000397396 Q8TAT8 98 aa17.45■□□□□ 0.38
TSPAN4-202ENST00000397396 TRBV20OR9-2A0A075B6H5 130 aa17.44■□□□□ 0.38
TSPAN4-202ENST00000397396 G3V4G9 280 aa17.44■□□□□ 0.38
TSPAN4-202ENST00000397396 CT45A10P0DMU9 189 aa17.44■□□□□ 0.38
TSPAN4-202ENST00000397396 PRB4P10163 310 aaPredicted RBP17.44■□□□□ 0.38
TSPAN4-202ENST00000397396 NUTF2P61970 127 aaKnown RBP17.44■□□□□ 0.38
TSPAN4-202ENST00000397396 TVP23CQ96ET8 276 aa17.44■□□□□ 0.38
TSPAN4-202ENST00000397396 CRISP2P16562 243 aa17.43■□□□□ 0.38
TSPAN4-202ENST00000397396 SMUG1Q53HV7 270 aa17.43■□□□□ 0.38
TSPAN4-202ENST00000397396 COX8CQ7Z4L0 72 aa17.43■□□□□ 0.38
TSPAN4-202ENST00000397396 FAM19A4Q96LR4 140 aa17.43■□□□□ 0.38
TSPAN4-202ENST00000397396 SDF2L1Q9HCN8 221 aa17.43■□□□□ 0.38
TSPAN4-202ENST00000397396 AMBPP02760 352 aa17.42■□□□□ 0.38
TSPAN4-202ENST00000397396 ZNF124Q15973 351 aa17.42■□□□□ 0.38
TSPAN4-202ENST00000397396 TRPT1Q86TN4 253 aaKnown RBP17.42■□□□□ 0.38
TSPAN4-202ENST00000397396 MLST8Q9BVC4 326 aa17.42■□□□□ 0.38
TSPAN4-202ENST00000397396 LINC01551Q86U37 167 aa17.41■□□□□ 0.38
TSPAN4-202ENST00000397396 DEFB125Q8N687 156 aa17.41■□□□□ 0.38
TSPAN4-202ENST00000397396 IGKV3-20P01619 116 aa17.4■□□□□ 0.38
TSPAN4-202ENST00000397396 MGST1P10620 155 aaKnown RBP17.4■□□□□ 0.38
TSPAN4-202ENST00000397396 CDKN1BP46527 198 aa17.4■□□□□ 0.38
TSPAN4-202ENST00000397396 MORN3Q6PF18 240 aaPredicted RBP17.4■□□□□ 0.38
TSPAN4-202ENST00000397396 Q8N1Y9 231 aa17.4■□□□□ 0.38
TSPAN4-202ENST00000397396 ATP6V1G1O75348 118 aa17.39■□□□□ 0.37
TSPAN4-202ENST00000397396 S100A1P23297 94 aa17.39■□□□□ 0.37
TSPAN4-202ENST00000397396 KRTAP10-11P60412 298 aa17.39■□□□□ 0.37
TSPAN4-202ENST00000397396 RPL23P62829 140 aaKnown RBP17.39■□□□□ 0.37
TSPAN4-202ENST00000397396 ADIRFQ15847 76 aa17.39■□□□□ 0.37
TSPAN4-202ENST00000397396 AMTNQ6UX39 209 aa17.39■□□□□ 0.37
TSPAN4-202ENST00000397396 SVBPQ8N300 66 aa17.39■□□□□ 0.37
TSPAN4-202ENST00000397396 OCC1Q8TAD7 63 aa17.39■□□□□ 0.37
TSPAN4-202ENST00000397396 WFDC10AQ9H1F0 79 aa17.39■□□□□ 0.37
TSPAN4-202ENST00000397396 SRD5A3Q9H8P0 318 aa17.39■□□□□ 0.37
TSPAN4-202ENST00000397396 IGLV2-8P01709 118 aa17.38■□□□□ 0.37
TSPAN4-202ENST00000397396 APOC3P02656 99 aa17.38■□□□□ 0.37
TSPAN4-202ENST00000397396 GPX1P07203 203 aa17.38■□□□□ 0.37
TSPAN4-202ENST00000397396 KPRPQ5T749 579 aaPredicted RBP17.38■□□□□ 0.37
TSPAN4-202ENST00000397396 NHLRC2Q8NBF2 726 aa17.38■□□□□ 0.37
TSPAN4-202ENST00000397396 PGPEP1LA6NFU8 196 aa17.37■□□□□ 0.37
TSPAN4-202ENST00000397396 KLLNB2CW77 178 aa17.37■□□□□ 0.37
TSPAN4-202ENST00000397396 GCGP01275 180 aa17.37■□□□□ 0.37
TSPAN4-202ENST00000397396 ZFAND2AQ8N6M9 145 aa17.37■□□□□ 0.37
TSPAN4-202ENST00000397396 C8orf49Q96NF6 230 aa17.37■□□□□ 0.37
TSPAN4-202ENST00000397396 ASCL2Q99929 193 aa17.37■□□□□ 0.37
TSPAN4-202ENST00000397396 TUBA4BQ9H853 241 aa17.37■□□□□ 0.37
TSPAN4-202ENST00000397396 B4DEV8 164 aa17.36■□□□□ 0.37
TSPAN4-202ENST00000397396 FAM162BQ5T6X4 162 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms