RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 SORL1Q92673 2214 aa9.91□□□□□ -0.82
SEC13-209ENST00000397117 TRAV25A0A0B4J276 109 aa9.9□□□□□ -0.82
SEC13-209ENST00000397117 ZNF705FA8MVS1 300 aaPredicted RBP9.9□□□□□ -0.82
SEC13-209ENST00000397117 S100A9P06702 114 aaKnown RBP9.9□□□□□ -0.82
SEC13-209ENST00000397117 FMC1Q96HJ9 113 aa9.9□□□□□ -0.82
SEC13-209ENST00000397117 LINC00479Q96M42 142 aa9.9□□□□□ -0.82
SEC13-209ENST00000397117 SACSQ9NZJ4 4579 aa9.9□□□□□ -0.82
SEC13-209ENST00000397117 TRAV34A0A0B4J273 112 aa9.89□□□□□ -0.83
SEC13-209ENST00000397117 K7EQG2 157 aa9.89□□□□□ -0.83
SEC13-209ENST00000397117 GNG4P50150 75 aa9.89□□□□□ -0.83
SEC13-209ENST00000397117 FLI1Q01543 452 aaPredicted RBP9.89□□□□□ -0.83
SEC13-209ENST00000397117 TMEM241Q24JQ0 296 aa9.89□□□□□ -0.83
SEC13-209ENST00000397117 PRR25Q96S07 402 aa9.89□□□□□ -0.83
SEC13-209ENST00000397117 ASCL2Q99929 193 aa9.89□□□□□ -0.83
SEC13-209ENST00000397117 NAT8Q9UHE5 227 aa9.89□□□□□ -0.83
SEC13-209ENST00000397117 TRAV2A0A0B4J234 112 aa9.89□□□□□ -0.83
SEC13-209ENST00000397117 OR4C46A6NHA9 309 aa9.89□□□□□ -0.83
SEC13-209ENST00000397117 PRB4P10163 310 aaPredicted RBP9.89□□□□□ -0.83
SEC13-209ENST00000397117 TAS2R60P59551 318 aa9.89□□□□□ -0.83
SEC13-209ENST00000397117 TMEM183BQ1AE95 376 aa9.89□□□□□ -0.83
SEC13-209ENST00000397117 CASC10Q5T4H9 136 aa9.89□□□□□ -0.83
SEC13-209ENST00000397117 TMEM88Q6PEY1 159 aa9.89□□□□□ -0.83
SEC13-209ENST00000397117 CBLN2Q8IUK8 224 aa9.89□□□□□ -0.83
SEC13-209ENST00000397117 TMEM75Q8N9X5 138 aa9.89□□□□□ -0.83
SEC13-209ENST00000397117 OR2K2Q8NGT1 345 aa9.89□□□□□ -0.83
SEC13-209ENST00000397117 TVP23CQ96ET8 276 aa9.89□□□□□ -0.83
SEC13-209ENST00000397117 C20orf173Q96LM9 149 aa9.89□□□□□ -0.83
SEC13-209ENST00000397117 SGK494Q96LW2 274 aa9.89□□□□□ -0.83
SEC13-209ENST00000397117 SPAG8Q99932 426 aaPredicted RBP9.89□□□□□ -0.83
SEC13-209ENST00000397117 KLF12Q9Y4X4 402 aa9.89□□□□□ -0.83
SEC13-209ENST00000397117 DNAH1Q9P2D7 4330 aa9.88□□□□□ -0.83
SEC13-209ENST00000397117 IGKV2-40A0A087WW87 121 aaPredicted RBP9.88□□□□□ -0.83
SEC13-209ENST00000397117 M0R036 132 aa9.88□□□□□ -0.83
SEC13-209ENST00000397117 IGKV2D-40P01614 121 aaPredicted RBP9.88□□□□□ -0.83
SEC13-209ENST00000397117 ZNF688P0C7X2 276 aa9.88□□□□□ -0.83
SEC13-209ENST00000397117 CENPWQ5EE01 88 aa9.88□□□□□ -0.83
SEC13-209ENST00000397117 PSMG4Q5JS54 123 aa9.88□□□□□ -0.83
SEC13-209ENST00000397117 MUC7Q8TAX7 377 aa9.88□□□□□ -0.83
SEC13-209ENST00000397117 EPPK1P58107 5090 aaKnown RBP9.88□□□□□ -0.83
SEC13-209ENST00000397117 TRAV8-1A0A0A6YYK1 113 aa9.87□□□□□ -0.83
SEC13-209ENST00000397117 RBAKDNA6NC62 111 aa9.87□□□□□ -0.83
SEC13-209ENST00000397117 FBLL1A6NHQ2 334 aaKnown RBP9.87□□□□□ -0.83
SEC13-209ENST00000397117 C9JCJ5 164 aa9.87□□□□□ -0.83
SEC13-209ENST00000397117 PRAC2D3DTV9 90 aa9.87□□□□□ -0.83
SEC13-209ENST00000397117 IGLV1-51P01701 117 aa9.87□□□□□ -0.83
SEC13-209ENST00000397117 INSL3P51460 131 aa9.87□□□□□ -0.83
SEC13-209ENST00000397117 C9orf66Q5T8R8 295 aa9.87□□□□□ -0.83
SEC13-209ENST00000397117 PRNTQ86SH4 94 aa9.87□□□□□ -0.83
SEC13-209ENST00000397117 OR10J6PQ8NGY7 276 aa9.87□□□□□ -0.83
SEC13-209ENST00000397117 SDF2L1Q9HCN8 221 aa9.87□□□□□ -0.83
SEC13-209ENST00000397117 BIRC6Q9NR09 4857 aa9.87□□□□□ -0.83
SEC13-209ENST00000397117 IZUMO1RA6ND01 250 aa9.86□□□□□ -0.83
SEC13-209ENST00000397117 PNRC1Q12796 327 aaPredicted RBP9.86□□□□□ -0.83
SEC13-209ENST00000397117 RHEBQ15382 184 aa9.86□□□□□ -0.83
SEC13-209ENST00000397117 ADIRFQ15847 76 aa9.86□□□□□ -0.83
SEC13-209ENST00000397117 BAGE2Q86Y30 109 aa9.86□□□□□ -0.83
SEC13-209ENST00000397117 FAM24BQ8N5W8 94 aa9.86□□□□□ -0.83
SEC13-209ENST00000397117 IGF2BP2-AS1Q96M15 143 aa9.86□□□□□ -0.83
SEC13-209ENST00000397117 TRBV20OR9-2A0A075B6H5 130 aa9.85□□□□□ -0.83
SEC13-209ENST00000397117 C7orf77A4D0Y5 90 aa9.85□□□□□ -0.83
SEC13-209ENST00000397117 TMEM78Q5T7P6 136 aa9.85□□□□□ -0.83
SEC13-209ENST00000397117 Q86TA4 180 aa9.85□□□□□ -0.83
SEC13-209ENST00000397117 VGLL1Q99990 258 aa9.85□□□□□ -0.83
SEC13-209ENST00000397117 TUBA4BQ9H853 241 aa9.85□□□□□ -0.83
SEC13-209ENST00000397117 SMCO4Q9NRQ5 59 aa9.85□□□□□ -0.83
SEC13-209ENST00000397117 PSG8Q9UQ74 426 aa9.85□□□□□ -0.83
SEC13-209ENST00000397117 LY96Q9Y6Y9 160 aa9.85□□□□□ -0.83
SEC13-209ENST00000397117 TRBV6-1A0A0K0K1D8 114 aa9.85□□□□□ -0.83
SEC13-209ENST00000397117 PGPEP1LA6NFU8 196 aa9.85□□□□□ -0.83
SEC13-209ENST00000397117 COLCA2A8K830 154 aa9.85□□□□□ -0.83
SEC13-209ENST00000397117 LTAP01374 205 aa9.85□□□□□ -0.83
SEC13-209ENST00000397117 IGLV2-11P01706 119 aa9.85□□□□□ -0.83
SEC13-209ENST00000397117 ERCC8Q13216 396 aa9.85□□□□□ -0.83
SEC13-209ENST00000397117 ZFP30Q9Y2G7 519 aa9.85□□□□□ -0.83
SEC13-209ENST00000397117 B4DEV8 164 aa9.84□□□□□ -0.83
SEC13-209ENST00000397117 MGST1P10620 155 aaKnown RBP9.84□□□□□ -0.83
SEC13-209ENST00000397117 RPL23P62829 140 aaKnown RBP9.84□□□□□ -0.83
SEC13-209ENST00000397117 HIST1H1AQ02539 215 aaPredicted RBP9.84□□□□□ -0.83
SEC13-209ENST00000397117 EBLN2Q6P2I7 272 aa9.84□□□□□ -0.83
SEC13-209ENST00000397117 C9orf47Q6ZRZ4 202 aa9.84□□□□□ -0.83
SEC13-209ENST00000397117 LINC01551Q86U37 167 aa9.84□□□□□ -0.83
SEC13-209ENST00000397117 C15orf54Q8N8G6 183 aa9.84□□□□□ -0.83
SEC13-209ENST00000397117 NHLRC2Q8NBF2 726 aa9.84□□□□□ -0.83
SEC13-209ENST00000397117 OR8A1Q8NGG7 326 aa9.84□□□□□ -0.83
SEC13-209ENST00000397117 OCC1Q8TAD7 63 aa9.84□□□□□ -0.83
SEC13-209ENST00000397117 SMIM12Q96EX1 92 aa9.84□□□□□ -0.83
SEC13-209ENST00000397117 NDFIP1Q9BT67 221 aa9.84□□□□□ -0.83
SEC13-209ENST00000397117 ZNF256Q9Y2P7 627 aaPredicted RBP9.84□□□□□ -0.83
SEC13-209ENST00000397117 LYSTQ99698 3801 aa9.84□□□□□ -0.83
SEC13-209ENST00000397117 A0A087WWC5 75 aa9.83□□□□□ -0.84
SEC13-209ENST00000397117 ZNF705DP0CH99 300 aaPredicted RBP9.83□□□□□ -0.84
SEC13-209ENST00000397117 ZNF705BP0CI00 300 aaPredicted RBP9.83□□□□□ -0.84
SEC13-209ENST00000397117 DEFB131AP59861 70 aa9.83□□□□□ -0.84
SEC13-209ENST00000397117 SAPCD1Q5SSQ6 148 aa9.83□□□□□ -0.84
SEC13-209ENST00000397117 LINC00477Q96M19 166 aa9.83□□□□□ -0.84
SEC13-209ENST00000397117 AGPAT4-IT1Q9H0P7 198 aa9.83□□□□□ -0.84
SEC13-209ENST00000397117 RPS10P5Q9NQ39 176 aa9.83□□□□□ -0.84
SEC13-209ENST00000397117 LCE6AA0A183 80 aa9.82□□□□□ -0.84
SEC13-209ENST00000397117 F6UB75 175 aa9.82□□□□□ -0.84
SEC13-209ENST00000397117 ZNF138P52744 262 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms