RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 AQP10Q96PS8 301 aa9.89□□□□□ -0.83
SEC13-204ENST00000397099 LINC00467Q9BRT7 94 aa9.89□□□□□ -0.83
SEC13-204ENST00000397099 SMIM3Q9BZL3 60 aa9.89□□□□□ -0.83
SEC13-204ENST00000397099 DNAH10Q8IVF4 4471 aa9.88□□□□□ -0.83
SEC13-204ENST00000397099 A0A1W2PPV4 95 aa9.88□□□□□ -0.83
SEC13-204ENST00000397099 PLAC8L1A1L4L8 177 aa9.88□□□□□ -0.83
SEC13-204ENST00000397099 C7orf71A4D174 169 aa9.88□□□□□ -0.83
SEC13-204ENST00000397099 SNURFLB1AK76 121 aa9.88□□□□□ -0.83
SEC13-204ENST00000397099 KLLNB2CW77 178 aa9.88□□□□□ -0.83
SEC13-204ENST00000397099 MBP02144 154 aa9.88□□□□□ -0.83
SEC13-204ENST00000397099 DEFB130BP0DP73 79 aa9.88□□□□□ -0.83
SEC13-204ENST00000397099 DEFB130AP0DP74 79 aa9.88□□□□□ -0.83
SEC13-204ENST00000397099 CRISP2P16562 243 aa9.88□□□□□ -0.83
SEC13-204ENST00000397099 AZU1P20160 251 aa9.88□□□□□ -0.83
SEC13-204ENST00000397099 FAM3BP58499 235 aaPredicted RBP9.88□□□□□ -0.83
SEC13-204ENST00000397099 UBE2L3P68036 154 aaKnown RBP9.88□□□□□ -0.83
SEC13-204ENST00000397099 RGS21Q2M5E4 152 aa9.88□□□□□ -0.83
SEC13-204ENST00000397099 EXOC3-AS1Q8N2X6 119 aa9.88□□□□□ -0.83
SEC13-204ENST00000397099 INO80EQ8NBZ0 244 aaPredicted RBP9.88□□□□□ -0.83
SEC13-204ENST00000397099 FAM19A4Q96LR4 140 aa9.88□□□□□ -0.83
SEC13-204ENST00000397099 LENEPQ9Y5L5 61 aa9.88□□□□□ -0.83
SEC13-204ENST00000397099 TRAV12-3A0A0B4J271 114 aa9.87□□□□□ -0.83
SEC13-204ENST00000397099 GPX1P07203 203 aa9.87□□□□□ -0.83
SEC13-204ENST00000397099 OR10J4P0C629 311 aa9.87□□□□□ -0.83
SEC13-204ENST00000397099 HTN3P15516 51 aa9.87□□□□□ -0.83
SEC13-204ENST00000397099 SERF2P84101 59 aa9.87□□□□□ -0.83
SEC13-204ENST00000397099 FCN2Q15485 313 aa9.87□□□□□ -0.83
SEC13-204ENST00000397099 FAM122CQ6P4D5 195 aa9.87□□□□□ -0.83
SEC13-204ENST00000397099 PSMG3Q9BT73 122 aaPredicted RBP9.87□□□□□ -0.83
SEC13-204ENST00000397099 AGPAT4-IT1Q9H0P7 198 aa9.87□□□□□ -0.83
SEC13-204ENST00000397099 ZNF138P52744 262 aa9.86□□□□□ -0.83
SEC13-204ENST00000397099 DAZ2Q13117 558 aaKnown RBP9.86□□□□□ -0.83
SEC13-204ENST00000397099 TMEM88Q6PEY1 159 aa9.86□□□□□ -0.83
SEC13-204ENST00000397099 OR2G3Q8NGZ4 309 aa9.86□□□□□ -0.83
SEC13-204ENST00000397099 TMED6Q8WW62 240 aa9.86□□□□□ -0.83
SEC13-204ENST00000397099 NOP10Q9NPE3 64 aaKnown RBP9.86□□□□□ -0.83
SEC13-204ENST00000397099 ZNF492Q9P255 531 aa9.86□□□□□ -0.83
SEC13-204ENST00000397099 PRM2P04554 102 aa9.85□□□□□ -0.83
SEC13-204ENST00000397099 RANP62826 216 aaKnown RBP9.85□□□□□ -0.83
SEC13-204ENST00000397099 ERCC8Q13216 396 aa9.85□□□□□ -0.83
SEC13-204ENST00000397099 ANXA2RQ3ZCQ2 193 aa9.85□□□□□ -0.83
SEC13-204ENST00000397099 UBE2DNLQ8IWF7 75 aa9.85□□□□□ -0.83
SEC13-204ENST00000397099 EIF4E3Q8N5X7 224 aaKnown RBP9.85□□□□□ -0.83
SEC13-204ENST00000397099 OR10G4Q8NGN3 311 aa9.85□□□□□ -0.83
SEC13-204ENST00000397099 OR10G9Q8NGN4 311 aa9.85□□□□□ -0.83
SEC13-204ENST00000397099 OR10G7Q8NGN6 311 aa9.85□□□□□ -0.83
SEC13-204ENST00000397099 CMTM2Q8TAZ6 248 aa9.85□□□□□ -0.83
SEC13-204ENST00000397099 GNPNAT1Q96EK6 184 aaPredicted RBP9.85□□□□□ -0.83
SEC13-204ENST00000397099 PHYHIPLQ96FC7 376 aa9.85□□□□□ -0.83
SEC13-204ENST00000397099 Q9H3A6 140 aa9.85□□□□□ -0.83
SEC13-204ENST00000397099 WFDC1Q9HC57 220 aa9.85□□□□□ -0.83
SEC13-204ENST00000397099 PLA2G2EQ9NZK7 142 aa9.85□□□□□ -0.83
SEC13-204ENST00000397099 HECTD4Q9Y4D8 3996 aa9.84□□□□□ -0.83
SEC13-204ENST00000397099 IGKV2-40A0A087WW87 121 aaPredicted RBP9.84□□□□□ -0.83
SEC13-204ENST00000397099 F5H768 121 aa9.84□□□□□ -0.83
SEC13-204ENST00000397099 ZNF324O75467 553 aaPredicted RBP9.84□□□□□ -0.83
SEC13-204ENST00000397099 IGKV2D-40P01614 121 aaPredicted RBP9.84□□□□□ -0.83
SEC13-204ENST00000397099 KIR3DS1Q14943 382 aa9.84□□□□□ -0.83
SEC13-204ENST00000397099 LINC00612Q8N6U2 182 aa9.84□□□□□ -0.83
SEC13-204ENST00000397099 ZNF503Q96F45 646 aa9.84□□□□□ -0.83
SEC13-204ENST00000397099 OTORQ9NRC9 128 aa9.84□□□□□ -0.83
SEC13-204ENST00000397099 BORCS7-ASMTA0A0B4J1R7 106 aa9.83□□□□□ -0.84
SEC13-204ENST00000397099 SERTM2A0A1B0GWG4 89 aa9.83□□□□□ -0.84
SEC13-204ENST00000397099 J3KRW8 73 aa9.83□□□□□ -0.84
SEC13-204ENST00000397099 RNASE4P34096 147 aaKnown RBP9.83□□□□□ -0.84
SEC13-204ENST00000397099 IBA57Q5T440 356 aaKnown RBP9.83□□□□□ -0.84
SEC13-204ENST00000397099 LINC00336Q6ZUF6 198 aa9.83□□□□□ -0.84
SEC13-204ENST00000397099 C18orf15Q96N68 181 aa9.83□□□□□ -0.84
SEC13-204ENST00000397099 VGLL1Q99990 258 aa9.83□□□□□ -0.84
SEC13-204ENST00000397099 DIRC3C9JPN6 131 aa9.82□□□□□ -0.84
SEC13-204ENST00000397099 H3BNG1 76 aa9.82□□□□□ -0.84
SEC13-204ENST00000397099 RGS13O14921 159 aa9.82□□□□□ -0.84
SEC13-204ENST00000397099 PRB4P10163 310 aaPredicted RBP9.82□□□□□ -0.84
SEC13-204ENST00000397099 CDC34P49427 236 aaPredicted RBP9.82□□□□□ -0.84
SEC13-204ENST00000397099 LGALS9BQ3B8N2 356 aa9.82□□□□□ -0.84
SEC13-204ENST00000397099 ZFAND2AQ8N6M9 145 aa9.82□□□□□ -0.84
SEC13-204ENST00000397099 ATG101Q9BSB4 218 aa9.82□□□□□ -0.84
SEC13-204ENST00000397099 TNFSF18Q9UNG2 199 aa9.82□□□□□ -0.84
SEC13-204ENST00000397099 PGPA6NDG6 321 aa9.81□□□□□ -0.84
SEC13-204ENST00000397099 TAAR5O14804 337 aa9.81□□□□□ -0.84
SEC13-204ENST00000397099 STAG3L2P0CL84 134 aa9.81□□□□□ -0.84
SEC13-204ENST00000397099 STAG3L3P0CL85 134 aa9.81□□□□□ -0.84
SEC13-204ENST00000397099 RAB2AP61019 212 aa9.81□□□□□ -0.84
SEC13-204ENST00000397099 CD300CQ08708 224 aa9.81□□□□□ -0.84
SEC13-204ENST00000397099 BTN1A1Q13410 526 aa9.81□□□□□ -0.84
SEC13-204ENST00000397099 HSD17B11Q8NBQ5 300 aa9.81□□□□□ -0.84
SEC13-204ENST00000397099 OR2T35Q8NGX2 323 aa9.81□□□□□ -0.84
SEC13-204ENST00000397099 ARPC5LQ9BPX5 153 aa9.81□□□□□ -0.84
SEC13-204ENST00000397099 IGHV1OR15-1A0A075B7D0 117 aa9.8□□□□□ -0.84
SEC13-204ENST00000397099 K7EQM0 130 aa9.8□□□□□ -0.84
SEC13-204ENST00000397099 ATP6V0CP27449 155 aa9.8□□□□□ -0.84
SEC13-204ENST00000397099 CCL18P55774 89 aa9.8□□□□□ -0.84
SEC13-204ENST00000397099 TCL1AP56279 114 aa9.8□□□□□ -0.84
SEC13-204ENST00000397099 ST6GAL2Q96JF0 529 aa9.8□□□□□ -0.84
SEC13-204ENST00000397099 TMEM167BQ9NRX6 74 aa9.8□□□□□ -0.84
SEC13-204ENST00000397099 DNAH2Q9P225 4427 aa9.8□□□□□ -0.84
SEC13-204ENST00000397099 TRGV2A0A075B6R0 118 aa9.79□□□□□ -0.84
SEC13-204ENST00000397099 FXYD6-FXYD2A0A087WZ82 144 aa9.79□□□□□ -0.84
SEC13-204ENST00000397099 FBLL1A6NHQ2 334 aaKnown RBP9.79□□□□□ -0.84
SEC13-204ENST00000397099 CXorf1O96002 111 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 197.9 ms