RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 PPP1R2P9O14990 202 aa10.18□□□□□ -0.78
MCF2L-209ENST00000397036 IGKV2D-40P01614 121 aaPredicted RBP10.18□□□□□ -0.78
MCF2L-209ENST00000397036 CMC4P56277 68 aaPredicted RBP10.18□□□□□ -0.78
MCF2L-209ENST00000397036 FAM231DQ6ZW35 169 aa10.18□□□□□ -0.78
MCF2L-209ENST00000397036 PRR25Q96S07 402 aa10.18□□□□□ -0.78
MCF2L-209ENST00000397036 VGLL1Q99990 258 aa10.18□□□□□ -0.78
MCF2L-209ENST00000397036 AGPAT4-IT1Q9H0P7 198 aa10.18□□□□□ -0.78
MCF2L-209ENST00000397036 TUBA4BQ9H853 241 aa10.18□□□□□ -0.78
MCF2L-209ENST00000397036 ZNF256Q9Y2P7 627 aaPredicted RBP10.18□□□□□ -0.78
MCF2L-209ENST00000397036 CXorf65A6NEN9 183 aa10.17□□□□□ -0.78
MCF2L-209ENST00000397036 PGPEP1LA6NFU8 196 aa10.17□□□□□ -0.78
MCF2L-209ENST00000397036 NPIPB6E9PJ23 425 aa10.17□□□□□ -0.78
MCF2L-209ENST00000397036 PRNTQ86SH4 94 aa10.17□□□□□ -0.78
MCF2L-209ENST00000397036 WFDC3Q8IUB2 231 aa10.17□□□□□ -0.78
MCF2L-209ENST00000397036 OR8A1Q8NGG7 326 aa10.17□□□□□ -0.78
MCF2L-209ENST00000397036 OR10J6PQ8NGY7 276 aa10.17□□□□□ -0.78
MCF2L-209ENST00000397036 FAM110AQ9BQ89 295 aa10.17□□□□□ -0.78
MCF2L-209ENST00000397036 MCRIP2Q9BUT9 160 aaKnown RBP10.17□□□□□ -0.78
MCF2L-209ENST00000397036 RPS10P5Q9NQ39 176 aa10.17□□□□□ -0.78
MCF2L-209ENST00000397036 OSTCQ9NRP0 149 aa10.17□□□□□ -0.78
MCF2L-209ENST00000397036 NOTCH3Q9UM47 2321 aa10.17□□□□□ -0.78
MCF2L-209ENST00000397036 COL6A5A8TX70 2615 aa10.17□□□□□ -0.78
MCF2L-209ENST00000397036 SAP30O75446 220 aa10.17□□□□□ -0.78
MCF2L-209ENST00000397036 ZNF138P52744 262 aa10.17□□□□□ -0.78
MCF2L-209ENST00000397036 RNF212Q495C1 297 aa10.17□□□□□ -0.78
MCF2L-209ENST00000397036 TMEM78Q5T7P6 136 aa10.17□□□□□ -0.78
MCF2L-209ENST00000397036 C12orf54Q6X4T0 127 aa10.17□□□□□ -0.78
MCF2L-209ENST00000397036 C3orf56Q8N813 242 aa10.17□□□□□ -0.78
MCF2L-209ENST00000397036 SFRP2Q96HF1 295 aa10.17□□□□□ -0.78
MCF2L-209ENST00000397036 ZNF492Q9P255 531 aa10.17□□□□□ -0.78
MCF2L-209ENST00000397036 ZNF688P0C7X2 276 aa10.16□□□□□ -0.78
MCF2L-209ENST00000397036 TFPI2P48307 235 aa10.16□□□□□ -0.78
MCF2L-209ENST00000397036 FAM24BQ8N5W8 94 aa10.16□□□□□ -0.78
MCF2L-209ENST00000397036 SGK494Q96LW2 274 aa10.16□□□□□ -0.78
MCF2L-209ENST00000397036 ODF3Q96PU9 254 aa10.16□□□□□ -0.78
MCF2L-209ENST00000397036 NDFIP1Q9BT67 221 aa10.16□□□□□ -0.78
MCF2L-209ENST00000397036 SMCO4Q9NRQ5 59 aa10.16□□□□□ -0.78
MCF2L-209ENST00000397036 A0A0J9YX75 114 aa10.15□□□□□ -0.78
MCF2L-209ENST00000397036 PSMG4Q5JS54 123 aa10.15□□□□□ -0.78
MCF2L-209ENST00000397036 C9orf66Q5T8R8 295 aa10.15□□□□□ -0.78
MCF2L-209ENST00000397036 FOXI2Q6ZQN5 318 aa10.15□□□□□ -0.78
MCF2L-209ENST00000397036 OR10G8Q8NGN5 311 aa10.15□□□□□ -0.78
MCF2L-209ENST00000397036 FAM19A4Q96LR4 140 aa10.15□□□□□ -0.78
MCF2L-209ENST00000397036 AURKAIP1Q9NWT8 199 aaPredicted RBP10.15□□□□□ -0.78
MCF2L-209ENST00000397036 SELENOKQ9Y6D0 94 aa10.15□□□□□ -0.78
MCF2L-209ENST00000397036 C19orf71A6NCJ1 209 aa10.14□□□□□ -0.79
MCF2L-209ENST00000397036 A8MTW9 85 aa10.14□□□□□ -0.79
MCF2L-209ENST00000397036 WIPF1O43516 503 aa10.14□□□□□ -0.79
MCF2L-209ENST00000397036 DUSP14O95147 198 aaKnown RBP10.14□□□□□ -0.79
MCF2L-209ENST00000397036 MGST1P10620 155 aaKnown RBP10.14□□□□□ -0.79
MCF2L-209ENST00000397036 ERCC8Q13216 396 aa10.14□□□□□ -0.79
MCF2L-209ENST00000397036 OR5I1Q13606 314 aa10.14□□□□□ -0.79
MCF2L-209ENST00000397036 BEAN1Q3B7T3 259 aa10.14□□□□□ -0.79
MCF2L-209ENST00000397036 EBLN2Q6P2I7 272 aa10.14□□□□□ -0.79
MCF2L-209ENST00000397036 C15orf54Q8N8G6 183 aa10.14□□□□□ -0.79
MCF2L-209ENST00000397036 CLUHP3Q96NS8 147 aa10.14□□□□□ -0.79
MCF2L-209ENST00000397036 IMMP2LQ96T52 175 aa10.14□□□□□ -0.79
MCF2L-209ENST00000397036 SAV1Q9H4B6 383 aaPredicted RBP10.14□□□□□ -0.79
MCF2L-209ENST00000397036 FBN1P35555 2871 aaKnown RBP10.14□□□□□ -0.79
MCF2L-209ENST00000397036 IZUMO1RA6ND01 250 aa10.13□□□□□ -0.79
MCF2L-209ENST00000397036 H7BYZ3 331 aa10.13□□□□□ -0.79
MCF2L-209ENST00000397036 CRISP2P16562 243 aa10.13□□□□□ -0.79
MCF2L-209ENST00000397036 ERVFC1-1P60608 527 aa10.13□□□□□ -0.79
MCF2L-209ENST00000397036 SMUG1Q53HV7 270 aa10.13□□□□□ -0.79
MCF2L-209ENST00000397036 APRG1Q8IVJ8 170 aa10.13□□□□□ -0.79
MCF2L-209ENST00000397036 STAB1Q9NY15 2570 aa10.13□□□□□ -0.79
MCF2L-209ENST00000397036 SCO1O75880 301 aa10.12□□□□□ -0.79
MCF2L-209ENST00000397036 CT45A10P0DMU9 189 aa10.12□□□□□ -0.79
MCF2L-209ENST00000397036 DEFB131AP59861 70 aa10.12□□□□□ -0.79
MCF2L-209ENST00000397036 CT83Q5H943 113 aa10.12□□□□□ -0.79
MCF2L-209ENST00000397036 IBA57Q5T440 356 aaKnown RBP10.12□□□□□ -0.79
MCF2L-209ENST00000397036 NHLRC2Q8NBF2 726 aa10.12□□□□□ -0.79
MCF2L-209ENST00000397036 NUDT10Q8NFP7 164 aa10.12□□□□□ -0.79
MCF2L-209ENST00000397036 OR4B1Q8NGF8 309 aa10.12□□□□□ -0.79
MCF2L-209ENST00000397036 NUDT11Q96G61 164 aa10.12□□□□□ -0.79
MCF2L-209ENST00000397036 ZC2HC1AQ96GY0 325 aa10.12□□□□□ -0.79
MCF2L-209ENST00000397036 CRIP1P50238 77 aa10.12□□□□□ -0.79
MCF2L-209ENST00000397036 HIST1H1AQ02539 215 aaPredicted RBP10.12□□□□□ -0.79
MCF2L-209ENST00000397036 BTN1A1Q13410 526 aa10.12□□□□□ -0.79
MCF2L-209ENST00000397036 DAZAP1Q96EP5 407 aaKnown RBP10.12□□□□□ -0.79
MCF2L-209ENST00000397036 ASCL2Q99929 193 aa10.12□□□□□ -0.79
MCF2L-209ENST00000397036 GPR61Q9BZJ8 451 aa10.12□□□□□ -0.79
MCF2L-209ENST00000397036 MAP6D1Q9H9H5 199 aa10.12□□□□□ -0.79
MCF2L-209ENST00000397036 V9GYV3 84 aa10.12□□□□□ -0.79
MCF2L-209ENST00000397036 FABP5P3A8MUU1 101 aa10.11□□□□□ -0.79
MCF2L-209ENST00000397036 F6UB75 175 aa10.11□□□□□ -0.79
MCF2L-209ENST00000397036 PFN1P07737 140 aaKnown RBP10.11□□□□□ -0.79
MCF2L-209ENST00000397036 HLA-DRB4P13762 266 aa10.11□□□□□ -0.79
MCF2L-209ENST00000397036 CD33P20138 364 aa10.11□□□□□ -0.79
MCF2L-209ENST00000397036 FAM162BQ5T6X4 162 aa10.11□□□□□ -0.79
MCF2L-209ENST00000397036 LINC00322Q6ZN03 302 aaPredicted RBP10.11□□□□□ -0.79
MCF2L-209ENST00000397036 Q8TAT8 98 aa10.11□□□□□ -0.79
MCF2L-209ENST00000397036 C8orf49Q96NF6 230 aa10.11□□□□□ -0.79
MCF2L-209ENST00000397036 RNASE7Q9H1E1 156 aaKnown RBP10.11□□□□□ -0.79
MCF2L-209ENST00000397036 HLA-DRB4X5D2U9 266 aa10.11□□□□□ -0.79
MCF2L-209ENST00000397036 FAM231BA6NCW3 169 aa10.1□□□□□ -0.79
MCF2L-209ENST00000397036 H3BMM0 161 aa10.1□□□□□ -0.79
MCF2L-209ENST00000397036 GATCO43716 136 aaKnown RBP10.1□□□□□ -0.79
MCF2L-209ENST00000397036 ZNF705DP0CH99 300 aaPredicted RBP10.1□□□□□ -0.79
MCF2L-209ENST00000397036 ZNF705BP0CI00 300 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms