RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 CTSGP08311 255 aa10.8□□□□□ -0.68
NUP98-204ENST00000397004 CDSNQ15517 529 aa10.8□□□□□ -0.68
NUP98-204ENST00000397004 TWIST1Q15672 202 aa10.8□□□□□ -0.68
NUP98-204ENST00000397004 FER1L6-AS1Q8NA97 138 aa10.8□□□□□ -0.68
NUP98-204ENST00000397004 C11orf21Q9P2W6 132 aa10.8□□□□□ -0.68
NUP98-204ENST00000397004 GNG7O60262 68 aa10.79□□□□□ -0.68
NUP98-204ENST00000397004 EVI2AP22794 236 aa10.79□□□□□ -0.68
NUP98-204ENST00000397004 NMUP48645 174 aa10.79□□□□□ -0.68
NUP98-204ENST00000397004 ZNF562Q6V9R5 426 aa10.79□□□□□ -0.68
NUP98-204ENST00000397004 NPBQ8NG41 125 aa10.79□□□□□ -0.68
NUP98-204ENST00000397004 COTL1Q14019 142 aa10.79□□□□□ -0.68
NUP98-204ENST00000397004 CKS2P33552 79 aa10.79□□□□□ -0.68
NUP98-204ENST00000397004 A0A0G2JLM5 398 aa10.78□□□□□ -0.68
NUP98-204ENST00000397004 K7EQM0 130 aa10.78□□□□□ -0.68
NUP98-204ENST00000397004 FXYD2P54710 66 aa10.78□□□□□ -0.68
NUP98-204ENST00000397004 PDE6HQ13956 83 aa10.78□□□□□ -0.68
NUP98-204ENST00000397004 CT45A10P0DMU9 189 aa10.78□□□□□ -0.68
NUP98-204ENST00000397004 ODF1Q14990 250 aa10.78□□□□□ -0.68
NUP98-204ENST00000397004 OR1N2Q8NGR9 330 aa10.78□□□□□ -0.68
NUP98-204ENST00000397004 RNF182Q8N6D2 247 aa10.78□□□□□ -0.68
NUP98-204ENST00000397004 SRSF8Q9BRL6 282 aaKnown RBP10.78□□□□□ -0.68
NUP98-204ENST00000397004 ZMAT4Q9H898 229 aa10.78□□□□□ -0.68
NUP98-204ENST00000397004 A1L4Q6 167 aa10.78□□□□□ -0.68
NUP98-204ENST00000397004 C5orf64Q2M2E5 130 aa10.78□□□□□ -0.68
NUP98-204ENST00000397004 ZNF672Q499Z4 452 aaPredicted RBP10.78□□□□□ -0.68
NUP98-204ENST00000397004 RNF5Q99942 180 aa10.78□□□□□ -0.68
NUP98-204ENST00000397004 LINC01546A6NGU7 62 aa10.77□□□□□ -0.69
NUP98-204ENST00000397004 K7EP34 96 aa10.77□□□□□ -0.69
NUP98-204ENST00000397004 K7ERJ3 54 aa10.77□□□□□ -0.69
NUP98-204ENST00000397004 NEGR1Q7Z3B1 354 aa10.77□□□□□ -0.69
NUP98-204ENST00000397004 FOXC1Q12948 553 aa10.77□□□□□ -0.69
NUP98-204ENST00000397004 ARL6IP6Q8N6S5 226 aa10.77□□□□□ -0.69
NUP98-204ENST00000397004 OR11H6Q8NGC7 330 aa10.77□□□□□ -0.69
NUP98-204ENST00000397004 AAMDCQ9H7C9 122 aa10.77□□□□□ -0.69
NUP98-204ENST00000397004 IGLV2-18A0A075B6J9 118 aa10.76□□□□□ -0.69
NUP98-204ENST00000397004 TRGV3P03979 118 aa10.76□□□□□ -0.69
NUP98-204ENST00000397004 ODF3BA8MYP8 253 aa10.76□□□□□ -0.69
NUP98-204ENST00000397004 B9A039 149 aa10.76□□□□□ -0.69
NUP98-204ENST00000397004 HSD52Q0P140 79 aa10.76□□□□□ -0.69
NUP98-204ENST00000397004 PHLDA1Q8WV24 401 aaPredicted RBP10.76□□□□□ -0.69
NUP98-204ENST00000397004 CNFNQ9BYD5 112 aa10.76□□□□□ -0.69
NUP98-204ENST00000397004 DPM3Q9P2X0 92 aa10.76□□□□□ -0.69
NUP98-204ENST00000397004 IGKV3D-20A0A0C4DH25 116 aa10.75□□□□□ -0.69
NUP98-204ENST00000397004 G3V4G9 280 aa10.75□□□□□ -0.69
NUP98-204ENST00000397004 C21orf62Q9NYP8 219 aa10.75□□□□□ -0.69
NUP98-204ENST00000397004 A0A1W2PPM0 123 aa10.75□□□□□ -0.69
NUP98-204ENST00000397004 LEPP41159 167 aa10.75□□□□□ -0.69
NUP98-204ENST00000397004 IGHV3-66A0A0C4DH42 116 aa10.75□□□□□ -0.69
NUP98-204ENST00000397004 MFAP4P55083 255 aa10.75□□□□□ -0.69
NUP98-204ENST00000397004 HES1Q14469 280 aa10.75□□□□□ -0.69
NUP98-204ENST00000397004 IL17RELQ6ZVW7 336 aa10.75□□□□□ -0.69
NUP98-204ENST00000397004 TTC9CQ8N5M4 171 aa10.75□□□□□ -0.69
NUP98-204ENST00000397004 ATRXP46100 2492 aa10.74□□□□□ -0.69
NUP98-204ENST00000397004 TNFRSF6BO95407 300 aa10.74□□□□□ -0.69
NUP98-204ENST00000397004 OR2K2Q8NGT1 345 aa10.74□□□□□ -0.69
NUP98-204ENST00000397004 CRYBG3Q68DQ2 2970 aa10.74□□□□□ -0.69
NUP98-204ENST00000397004 TRAV26-2A0A0B4J265 109 aa10.74□□□□□ -0.69
NUP98-204ENST00000397004 MAPKAPK5-AS1Q8N8E1 139 aa10.74□□□□□ -0.69
NUP98-204ENST00000397004 OR9G4Q8NGQ1 327 aa10.74□□□□□ -0.69
NUP98-204ENST00000397004 ZNF48Q96MX3 618 aaPredicted RBP10.74□□□□□ -0.69
NUP98-204ENST00000397004 MSRB2Q9Y3D2 182 aa10.74□□□□□ -0.69
NUP98-204ENST00000397004 MAP1AP78559 2803 aaPredicted RBP10.74□□□□□ -0.69
NUP98-204ENST00000397004 SIVA1O15304 175 aa10.74□□□□□ -0.69
NUP98-204ENST00000397004 Q8N6K4 173 aa10.74□□□□□ -0.69
NUP98-204ENST00000397004 ARPC1AQ92747 370 aa10.74□□□□□ -0.69
NUP98-204ENST00000397004 AGRNO00468 2067 aa10.73□□□□□ -0.69
NUP98-204ENST00000397004 IGHV3OR16-13A0A075B7E8 117 aa10.73□□□□□ -0.69
NUP98-204ENST00000397004 IGHV3-74A0A0B4J1X5 117 aa10.73□□□□□ -0.69
NUP98-204ENST00000397004 ORM1P02763 201 aa10.73□□□□□ -0.69
NUP98-204ENST00000397004 CLPSL1A2RUU4 121 aa10.73□□□□□ -0.69
NUP98-204ENST00000397004 K7ENP7 123 aa10.73□□□□□ -0.69
NUP98-204ENST00000397004 GTSCR1Q86UQ5 136 aa10.73□□□□□ -0.69
NUP98-204ENST00000397004 DTX2Q86UW9 622 aa10.73□□□□□ -0.69
NUP98-204ENST00000397004 NPFFR1Q9GZQ6 430 aa10.73□□□□□ -0.69
NUP98-204ENST00000397004 RAB1BQ9H0U4 201 aa10.73□□□□□ -0.69
NUP98-204ENST00000397004 IGHV7-81A0A0B4J1V7 117 aa10.72□□□□□ -0.69
NUP98-204ENST00000397004 LINC01548A6NM66 108 aa10.72□□□□□ -0.69
NUP98-204ENST00000397004 SPRY2O43597 315 aa10.72□□□□□ -0.69
NUP98-204ENST00000397004 CD3EP07766 207 aa10.72□□□□□ -0.69
NUP98-204ENST00000397004 NCBP2LA6PVI3 153 aaKnown RBP10.72□□□□□ -0.69
NUP98-204ENST00000397004 K7ERU9 68 aa10.72□□□□□ -0.69
NUP98-204ENST00000397004 ZNF207O43670 478 aaKnown RBP10.72□□□□□ -0.69
NUP98-204ENST00000397004 TMEM158Q8WZ71 300 aa10.72□□□□□ -0.69
NUP98-204ENST00000397004 ZFAND3Q9H8U3 227 aa10.72□□□□□ -0.69
NUP98-204ENST00000397004 SPTA1P02549 2419 aa10.71□□□□□ -0.69
NUP98-204ENST00000397004 A6NDN8 102 aa10.71□□□□□ -0.69
NUP98-204ENST00000397004 AJUBAQ96IF1 538 aa10.71□□□□□ -0.69
NUP98-204ENST00000397004 PTPRQQ9UMZ3 2332 aa10.71□□□□□ -0.69
NUP98-204ENST00000397004 TRBV25-1A0A075B6N4 114 aa10.71□□□□□ -0.69
NUP98-204ENST00000397004 FBLL1A6NHQ2 334 aaKnown RBP10.71□□□□□ -0.69
NUP98-204ENST00000397004 FCER1GP30273 86 aa10.71□□□□□ -0.69
NUP98-204ENST00000397004 OR4X2Q8NGF9 303 aa10.71□□□□□ -0.69
NUP98-204ENST00000397004 CELSR2Q9HCU4 2923 aa10.71□□□□□ -0.7
NUP98-204ENST00000397004 IGHV7-4-1A0A0J9YVY3 117 aa10.71□□□□□ -0.7
NUP98-204ENST00000397004 RPL7P18124 248 aaKnown RBP10.71□□□□□ -0.7
NUP98-204ENST00000397004 ZFP36P26651 326 aaKnown RBP10.71□□□□□ -0.7
NUP98-204ENST00000397004 NRACQ8N912 160 aa10.71□□□□□ -0.7
NUP98-204ENST00000397004 PIFOQ8TCI5 191 aa10.71□□□□□ -0.7
NUP98-204ENST00000397004 SPCS1Q9Y6A9 102 aa10.71□□□□□ -0.7
NUP98-204ENST00000397004 TRAV8-2A0A0B4J237 113 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms